Experiment: Fusidic 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2120 and Ac3H11_2121 are separated by 116 nucleotides Ac3H11_2121 and Ac3H11_2122 are separated by 167 nucleotides Ac3H11_2122 and Ac3H11_2123 are separated by 61 nucleotides Ac3H11_2123 and Ac3H11_2124 are separated by 246 nucleotides
Ac3H11_2120 - C-type cytochrome biogenesis protein ResA (thioredoxin), at 357,067 to 357,585
_2120
Ac3H11_2121 - putative c'cytochrome, at 357,702 to 358,157
_2121
Ac3H11_2122 - Ni,Fe-hydrogenase I cytochrome b subunit, at 358,325 to 359,005
_2122
Ac3H11_2123 - Histone acetyltransferase HPA2 and related acetyltransferases, at 359,067 to 359,558
_2123
Ac3H11_2124 - Reverse transcriptase, at 359,805 to 361,367
_2124
Position (kb) 358
359
360 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 357.376 kb on + strand, within Ac3H11_2120 at 357.377 kb on - strand, within Ac3H11_2120 at 357.520 kb on + strand, within Ac3H11_2120 at 357.662 kb on + strand at 357.676 kb on - strand at 357.683 kb on - strand at 357.693 kb on + strand at 357.693 kb on + strand at 357.694 kb on - strand at 357.715 kb on + strand at 357.715 kb on + strand at 357.715 kb on + strand at 357.715 kb on + strand at 357.715 kb on + strand at 357.716 kb on - strand at 357.716 kb on - strand at 357.716 kb on - strand at 357.716 kb on - strand at 357.716 kb on - strand at 357.716 kb on - strand at 358.060 kb on + strand, within Ac3H11_2121 at 358.061 kb on - strand, within Ac3H11_2121 at 358.061 kb on - strand, within Ac3H11_2121 at 358.210 kb on + strand at 358.210 kb on + strand at 358.210 kb on + strand at 358.210 kb on + strand at 358.210 kb on + strand at 358.211 kb on - strand at 358.211 kb on - strand at 358.211 kb on - strand at 358.211 kb on - strand at 358.307 kb on + strand at 358.308 kb on - strand at 358.308 kb on - strand at 358.308 kb on - strand at 358.308 kb on - strand at 358.308 kb on - strand at 358.308 kb on - strand at 358.341 kb on + strand at 358.342 kb on - strand at 358.342 kb on - strand at 358.460 kb on + strand, within Ac3H11_2122 at 358.461 kb on - strand, within Ac3H11_2122 at 358.541 kb on + strand, within Ac3H11_2122 at 358.541 kb on + strand, within Ac3H11_2122 at 358.542 kb on - strand, within Ac3H11_2122 at 358.542 kb on - strand, within Ac3H11_2122 at 358.542 kb on - strand, within Ac3H11_2122 at 358.542 kb on - strand, within Ac3H11_2122 at 358.565 kb on + strand, within Ac3H11_2122 at 358.565 kb on + strand, within Ac3H11_2122 at 358.565 kb on + strand, within Ac3H11_2122 at 358.566 kb on - strand, within Ac3H11_2122 at 358.775 kb on + strand, within Ac3H11_2122 at 358.775 kb on + strand, within Ac3H11_2122 at 358.775 kb on + strand, within Ac3H11_2122 at 358.776 kb on - strand, within Ac3H11_2122 at 358.823 kb on + strand, within Ac3H11_2122 at 358.823 kb on + strand, within Ac3H11_2122 at 358.823 kb on + strand, within Ac3H11_2122 at 358.824 kb on - strand, within Ac3H11_2122 at 358.824 kb on - strand, within Ac3H11_2122 at 358.824 kb on - strand, within Ac3H11_2122 at 358.824 kb on - strand, within Ac3H11_2122 at 358.824 kb on - strand, within Ac3H11_2122 at 358.824 kb on - strand, within Ac3H11_2122 at 359.031 kb on + strand at 359.031 kb on + strand at 359.032 kb on - strand at 359.146 kb on - strand, within Ac3H11_2123 at 359.218 kb on - strand, within Ac3H11_2123 at 359.418 kb on + strand, within Ac3H11_2123 at 359.418 kb on + strand, within Ac3H11_2123 at 359.419 kb on - strand, within Ac3H11_2123 at 359.419 kb on - strand, within Ac3H11_2123 at 359.472 kb on + strand, within Ac3H11_2123 at 359.472 kb on + strand, within Ac3H11_2123 at 359.472 kb on + strand, within Ac3H11_2123 at 359.472 kb on + strand, within Ac3H11_2123 at 359.473 kb on - strand, within Ac3H11_2123 at 359.473 kb on - strand, within Ac3H11_2123 at 359.505 kb on + strand, within Ac3H11_2123 at 359.505 kb on + strand, within Ac3H11_2123 at 359.506 kb on - strand, within Ac3H11_2123 at 359.506 kb on - strand, within Ac3H11_2123 at 359.506 kb on - strand, within Ac3H11_2123 at 359.506 kb on - strand, within Ac3H11_2123 at 359.506 kb on - strand, within Ac3H11_2123 at 359.506 kb on - strand, within Ac3H11_2123 at 359.506 kb on - strand, within Ac3H11_2123 at 359.508 kb on + strand, within Ac3H11_2123 at 359.508 kb on + strand, within Ac3H11_2123 at 359.509 kb on - strand at 359.509 kb on - strand at 359.509 kb on - strand at 359.509 kb on - strand at 359.535 kb on + strand at 359.535 kb on + strand at 359.535 kb on + strand at 359.536 kb on - strand at 359.588 kb on - strand at 359.621 kb on + strand at 359.621 kb on + strand at 359.621 kb on + strand at 359.622 kb on - strand at 359.702 kb on + strand at 359.702 kb on + strand at 359.702 kb on + strand at 359.702 kb on + strand at 359.703 kb on - strand at 359.703 kb on - strand at 359.703 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.001 mg/ml remove 357,376 + Ac3H11_2120 0.60 -1.0 357,377 - Ac3H11_2120 0.60 +1.1 357,520 + Ac3H11_2120 0.87 -1.8 357,662 + +0.1 357,676 - +0.8 357,683 - +0.8 357,693 + +0.1 357,693 + -0.4 357,694 - -0.3 357,715 + -0.6 357,715 + -0.7 357,715 + +1.5 357,715 + -0.9 357,715 + -1.0 357,716 - -2.5 357,716 - +0.1 357,716 - +0.6 357,716 - +1.0 357,716 - +0.5 357,716 - +0.7 358,060 + Ac3H11_2121 0.79 -2.4 358,061 - Ac3H11_2121 0.79 -0.7 358,061 - Ac3H11_2121 0.79 +1.2 358,210 + -0.9 358,210 + -0.1 358,210 + -0.1 358,210 + +0.5 358,210 + -1.0 358,211 - -0.1 358,211 - +1.1 358,211 - +0.3 358,211 - +0.9 358,307 + -0.4 358,308 - -1.2 358,308 - -2.7 358,308 - -0.0 358,308 - -4.3 358,308 - -0.4 358,308 - +1.0 358,341 + -1.0 358,342 - -0.3 358,342 - -0.6 358,460 + Ac3H11_2122 0.20 -1.6 358,461 - Ac3H11_2122 0.20 -1.0 358,541 + Ac3H11_2122 0.32 +0.4 358,541 + Ac3H11_2122 0.32 -0.7 358,542 - Ac3H11_2122 0.32 -0.0 358,542 - Ac3H11_2122 0.32 +0.3 358,542 - Ac3H11_2122 0.32 -0.6 358,542 - Ac3H11_2122 0.32 -1.0 358,565 + Ac3H11_2122 0.35 -0.4 358,565 + Ac3H11_2122 0.35 +0.2 358,565 + Ac3H11_2122 0.35 -0.7 358,566 - Ac3H11_2122 0.35 +0.4 358,775 + Ac3H11_2122 0.66 -0.5 358,775 + Ac3H11_2122 0.66 -0.3 358,775 + Ac3H11_2122 0.66 -0.8 358,776 - Ac3H11_2122 0.66 +0.1 358,823 + Ac3H11_2122 0.73 -0.1 358,823 + Ac3H11_2122 0.73 -0.3 358,823 + Ac3H11_2122 0.73 -0.1 358,824 - Ac3H11_2122 0.73 +2.5 358,824 - Ac3H11_2122 0.73 +2.4 358,824 - Ac3H11_2122 0.73 -1.9 358,824 - Ac3H11_2122 0.73 -0.5 358,824 - Ac3H11_2122 0.73 +1.2 358,824 - Ac3H11_2122 0.73 -0.5 359,031 + -0.2 359,031 + -0.9 359,032 - -0.1 359,146 - Ac3H11_2123 0.16 -0.4 359,218 - Ac3H11_2123 0.31 -3.4 359,418 + Ac3H11_2123 0.71 -0.7 359,418 + Ac3H11_2123 0.71 -1.2 359,419 - Ac3H11_2123 0.72 -0.3 359,419 - Ac3H11_2123 0.72 -1.3 359,472 + Ac3H11_2123 0.82 +0.4 359,472 + Ac3H11_2123 0.82 -0.1 359,472 + Ac3H11_2123 0.82 -0.1 359,472 + Ac3H11_2123 0.82 -0.8 359,473 - Ac3H11_2123 0.83 -1.0 359,473 - Ac3H11_2123 0.83 +0.3 359,505 + Ac3H11_2123 0.89 +1.5 359,505 + Ac3H11_2123 0.89 -0.0 359,506 - Ac3H11_2123 0.89 -0.9 359,506 - Ac3H11_2123 0.89 -1.5 359,506 - Ac3H11_2123 0.89 -1.3 359,506 - Ac3H11_2123 0.89 +0.3 359,506 - Ac3H11_2123 0.89 -1.2 359,506 - Ac3H11_2123 0.89 -0.8 359,506 - Ac3H11_2123 0.89 +0.3 359,508 + Ac3H11_2123 0.90 +0.1 359,508 + Ac3H11_2123 0.90 +0.1 359,509 - -0.1 359,509 - -2.5 359,509 - +0.0 359,509 - -3.7 359,535 + -0.2 359,535 + -0.0 359,535 + -1.8 359,536 - -2.2 359,588 - +0.1 359,621 + -0.2 359,621 + -0.9 359,621 + -1.2 359,622 - +0.6 359,702 + -1.2 359,702 + +0.0 359,702 + -0.7 359,702 + -1.1 359,703 - -0.8 359,703 - +0.3 359,703 - -1.6
Or see this region's nucleotide sequence