Experiment: Fusidic 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1206 and Ac3H11_1207 overlap by 4 nucleotides Ac3H11_1207 and Ac3H11_1208 overlap by 4 nucleotides Ac3H11_1208 and Ac3H11_1209 are separated by 89 nucleotides
Ac3H11_1206 - Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY, at 15,967 to 18,060
_1206
Ac3H11_1207 - FIG003879: Predicted amidohydrolase, at 18,057 to 18,875
_1207
Ac3H11_1208 - FIG005080: Possible exported protein, at 18,872 to 23,020
_1208
Ac3H11_1209 - Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42), at 23,110 to 25,875
_1209
Position (kb) 18
19
20
21
22
23
24 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 17.918 kb on + strand at 17.919 kb on - strand at 17.919 kb on - strand at 18.256 kb on + strand, within Ac3H11_1207 at 18.256 kb on + strand, within Ac3H11_1207 at 18.256 kb on + strand, within Ac3H11_1207 at 18.256 kb on + strand, within Ac3H11_1207 at 18.256 kb on + strand, within Ac3H11_1207 at 18.257 kb on - strand, within Ac3H11_1207 at 18.257 kb on - strand, within Ac3H11_1207 at 18.257 kb on - strand, within Ac3H11_1207 at 18.268 kb on + strand, within Ac3H11_1207 at 18.400 kb on + strand, within Ac3H11_1207 at 18.400 kb on + strand, within Ac3H11_1207 at 18.400 kb on + strand, within Ac3H11_1207 at 18.401 kb on - strand, within Ac3H11_1207 at 18.401 kb on - strand, within Ac3H11_1207 at 18.499 kb on + strand, within Ac3H11_1207 at 18.499 kb on + strand, within Ac3H11_1207 at 18.499 kb on + strand, within Ac3H11_1207 at 18.500 kb on - strand, within Ac3H11_1207 at 18.500 kb on - strand, within Ac3H11_1207 at 18.544 kb on + strand, within Ac3H11_1207 at 18.544 kb on + strand, within Ac3H11_1207 at 18.545 kb on - strand, within Ac3H11_1207 at 18.754 kb on + strand, within Ac3H11_1207 at 18.755 kb on - strand, within Ac3H11_1207 at 18.755 kb on - strand, within Ac3H11_1207 at 18.755 kb on - strand, within Ac3H11_1207 at 18.867 kb on + strand at 18.868 kb on - strand at 18.868 kb on - strand at 18.868 kb on - strand at 18.868 kb on - strand at 19.905 kb on + strand, within Ac3H11_1208 at 19.905 kb on + strand, within Ac3H11_1208 at 20.050 kb on - strand, within Ac3H11_1208 at 20.050 kb on - strand, within Ac3H11_1208 at 20.050 kb on - strand, within Ac3H11_1208 at 20.050 kb on - strand, within Ac3H11_1208 at 20.083 kb on + strand, within Ac3H11_1208 at 20.083 kb on + strand, within Ac3H11_1208 at 20.084 kb on - strand, within Ac3H11_1208 at 20.084 kb on - strand, within Ac3H11_1208 at 20.084 kb on - strand, within Ac3H11_1208 at 20.283 kb on + strand, within Ac3H11_1208 at 20.283 kb on + strand, within Ac3H11_1208 at 20.283 kb on + strand, within Ac3H11_1208 at 20.284 kb on - strand, within Ac3H11_1208 at 20.284 kb on - strand, within Ac3H11_1208 at 20.529 kb on + strand, within Ac3H11_1208 at 20.529 kb on + strand, within Ac3H11_1208 at 20.529 kb on + strand, within Ac3H11_1208 at 20.530 kb on - strand, within Ac3H11_1208 at 20.530 kb on - strand, within Ac3H11_1208 at 20.530 kb on - strand, within Ac3H11_1208 at 21.195 kb on + strand, within Ac3H11_1208 at 21.195 kb on + strand, within Ac3H11_1208 at 21.195 kb on + strand, within Ac3H11_1208 at 21.196 kb on - strand, within Ac3H11_1208 at 21.201 kb on + strand, within Ac3H11_1208 at 21.201 kb on + strand, within Ac3H11_1208 at 21.201 kb on + strand, within Ac3H11_1208 at 21.201 kb on + strand, within Ac3H11_1208 at 21.201 kb on + strand, within Ac3H11_1208 at 21.201 kb on + strand, within Ac3H11_1208 at 21.201 kb on + strand, within Ac3H11_1208 at 21.201 kb on + strand, within Ac3H11_1208 at 21.201 kb on + strand, within Ac3H11_1208 at 21.201 kb on + strand, within Ac3H11_1208 at 21.201 kb on + strand, within Ac3H11_1208 at 21.201 kb on + strand, within Ac3H11_1208 at 21.201 kb on + strand, within Ac3H11_1208 at 21.201 kb on + strand, within Ac3H11_1208 at 21.201 kb on + strand, within Ac3H11_1208 at 21.201 kb on + strand, within Ac3H11_1208 at 21.202 kb on - strand, within Ac3H11_1208 at 21.202 kb on - strand, within Ac3H11_1208 at 21.202 kb on - strand, within Ac3H11_1208 at 21.202 kb on - strand, within Ac3H11_1208 at 21.202 kb on - strand, within Ac3H11_1208 at 21.202 kb on - strand, within Ac3H11_1208 at 21.202 kb on - strand, within Ac3H11_1208 at 21.202 kb on - strand, within Ac3H11_1208 at 21.202 kb on - strand, within Ac3H11_1208 at 21.202 kb on - strand, within Ac3H11_1208 at 21.202 kb on - strand, within Ac3H11_1208 at 21.202 kb on - strand, within Ac3H11_1208 at 21.202 kb on - strand, within Ac3H11_1208 at 21.336 kb on + strand, within Ac3H11_1208 at 21.336 kb on + strand, within Ac3H11_1208 at 21.337 kb on - strand, within Ac3H11_1208 at 21.337 kb on - strand, within Ac3H11_1208 at 21.337 kb on - strand, within Ac3H11_1208 at 21.337 kb on - strand, within Ac3H11_1208 at 21.337 kb on - strand, within Ac3H11_1208 at 21.781 kb on - strand, within Ac3H11_1208 at 21.849 kb on + strand, within Ac3H11_1208 at 21.849 kb on + strand, within Ac3H11_1208 at 21.849 kb on + strand, within Ac3H11_1208 at 21.849 kb on + strand, within Ac3H11_1208 at 21.849 kb on + strand, within Ac3H11_1208 at 21.849 kb on + strand, within Ac3H11_1208 at 21.849 kb on + strand, within Ac3H11_1208 at 21.849 kb on + strand, within Ac3H11_1208 at 21.850 kb on - strand, within Ac3H11_1208 at 21.850 kb on - strand, within Ac3H11_1208 at 21.850 kb on - strand, within Ac3H11_1208 at 21.850 kb on - strand, within Ac3H11_1208 at 21.850 kb on - strand, within Ac3H11_1208 at 21.850 kb on - strand, within Ac3H11_1208 at 21.982 kb on + strand, within Ac3H11_1208 at 21.983 kb on - strand, within Ac3H11_1208 at 21.983 kb on - strand, within Ac3H11_1208 at 21.983 kb on - strand, within Ac3H11_1208 at 22.232 kb on + strand, within Ac3H11_1208 at 22.232 kb on + strand, within Ac3H11_1208 at 22.232 kb on + strand, within Ac3H11_1208 at 22.232 kb on + strand, within Ac3H11_1208 at 22.232 kb on + strand, within Ac3H11_1208 at 22.232 kb on + strand, within Ac3H11_1208 at 22.233 kb on - strand, within Ac3H11_1208 at 22.233 kb on - strand, within Ac3H11_1208 at 22.233 kb on - strand, within Ac3H11_1208 at 22.233 kb on - strand, within Ac3H11_1208 at 22.605 kb on + strand, within Ac3H11_1208 at 22.605 kb on + strand, within Ac3H11_1208 at 22.605 kb on + strand, within Ac3H11_1208 at 22.605 kb on + strand, within Ac3H11_1208 at 22.605 kb on + strand, within Ac3H11_1208 at 22.605 kb on + strand, within Ac3H11_1208 at 22.606 kb on - strand at 22.606 kb on - strand at 22.606 kb on - strand at 22.606 kb on - strand at 22.656 kb on + strand at 22.656 kb on + strand at 22.656 kb on + strand at 22.656 kb on + strand at 22.656 kb on + strand at 22.656 kb on + strand at 22.656 kb on + strand at 22.656 kb on + strand at 22.656 kb on + strand at 22.656 kb on + strand at 22.656 kb on + strand at 22.656 kb on + strand at 22.657 kb on - strand at 22.657 kb on - strand at 22.657 kb on - strand at 22.657 kb on - strand at 22.657 kb on - strand at 22.657 kb on - strand at 22.657 kb on - strand at 22.657 kb on - strand at 22.657 kb on - strand at 22.657 kb on - strand at 22.657 kb on - strand at 22.979 kb on + strand at 22.979 kb on + strand at 22.980 kb on - strand at 23.045 kb on + strand at 23.045 kb on + strand at 23.045 kb on + strand at 23.045 kb on + strand at 23.074 kb on + strand at 23.074 kb on + strand at 23.075 kb on - strand at 23.584 kb on + strand, within Ac3H11_1209 at 23.584 kb on + strand, within Ac3H11_1209 at 23.590 kb on + strand, within Ac3H11_1209 at 23.591 kb on - strand, within Ac3H11_1209 at 23.680 kb on + strand, within Ac3H11_1209 at 23.680 kb on + strand, within Ac3H11_1209 at 23.680 kb on + strand, within Ac3H11_1209 at 23.680 kb on + strand, within Ac3H11_1209 at 23.680 kb on + strand, within Ac3H11_1209 at 23.680 kb on + strand, within Ac3H11_1209 at 23.794 kb on + strand, within Ac3H11_1209 at 23.794 kb on + strand, within Ac3H11_1209 at 23.794 kb on + strand, within Ac3H11_1209 at 23.794 kb on + strand, within Ac3H11_1209 at 23.794 kb on + strand, within Ac3H11_1209 at 23.795 kb on - strand, within Ac3H11_1209
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.001 mg/ml remove 17,918 + -0.9 17,919 - +1.6 17,919 - -0.0 18,256 + Ac3H11_1207 0.24 -0.6 18,256 + Ac3H11_1207 0.24 -0.2 18,256 + Ac3H11_1207 0.24 -0.3 18,256 + Ac3H11_1207 0.24 +0.5 18,256 + Ac3H11_1207 0.24 -0.9 18,257 - Ac3H11_1207 0.24 -0.1 18,257 - Ac3H11_1207 0.24 -0.1 18,257 - Ac3H11_1207 0.24 +0.6 18,268 + Ac3H11_1207 0.26 -0.3 18,400 + Ac3H11_1207 0.42 -1.8 18,400 + Ac3H11_1207 0.42 +0.4 18,400 + Ac3H11_1207 0.42 -2.8 18,401 - Ac3H11_1207 0.42 -1.7 18,401 - Ac3H11_1207 0.42 +0.2 18,499 + Ac3H11_1207 0.54 -0.5 18,499 + Ac3H11_1207 0.54 -0.3 18,499 + Ac3H11_1207 0.54 -1.2 18,500 - Ac3H11_1207 0.54 +1.0 18,500 - Ac3H11_1207 0.54 +0.1 18,544 + Ac3H11_1207 0.59 +0.4 18,544 + Ac3H11_1207 0.59 +0.3 18,545 - Ac3H11_1207 0.60 +0.3 18,754 + Ac3H11_1207 0.85 +1.0 18,755 - Ac3H11_1207 0.85 +0.9 18,755 - Ac3H11_1207 0.85 -0.8 18,755 - Ac3H11_1207 0.85 -0.2 18,867 + +0.8 18,868 - +1.9 18,868 - +0.3 18,868 - -0.7 18,868 - +0.6 19,905 + Ac3H11_1208 0.25 +1.9 19,905 + Ac3H11_1208 0.25 +2.1 20,050 - Ac3H11_1208 0.28 +0.3 20,050 - Ac3H11_1208 0.28 +0.7 20,050 - Ac3H11_1208 0.28 +2.3 20,050 - Ac3H11_1208 0.28 +2.0 20,083 + Ac3H11_1208 0.29 +1.4 20,083 + Ac3H11_1208 0.29 +1.6 20,084 - Ac3H11_1208 0.29 +0.8 20,084 - Ac3H11_1208 0.29 +1.7 20,084 - Ac3H11_1208 0.29 +1.3 20,283 + Ac3H11_1208 0.34 +1.3 20,283 + Ac3H11_1208 0.34 -0.5 20,283 + Ac3H11_1208 0.34 +1.8 20,284 - Ac3H11_1208 0.34 +2.0 20,284 - Ac3H11_1208 0.34 +1.1 20,529 + Ac3H11_1208 0.40 +1.5 20,529 + Ac3H11_1208 0.40 +2.1 20,529 + Ac3H11_1208 0.40 +1.7 20,530 - Ac3H11_1208 0.40 +0.6 20,530 - Ac3H11_1208 0.40 +1.4 20,530 - Ac3H11_1208 0.40 +1.6 21,195 + Ac3H11_1208 0.56 +1.7 21,195 + Ac3H11_1208 0.56 +1.4 21,195 + Ac3H11_1208 0.56 +1.8 21,196 - Ac3H11_1208 0.56 +1.7 21,201 + Ac3H11_1208 0.56 +1.8 21,201 + Ac3H11_1208 0.56 +1.3 21,201 + Ac3H11_1208 0.56 +1.2 21,201 + Ac3H11_1208 0.56 +1.8 21,201 + Ac3H11_1208 0.56 +1.4 21,201 + Ac3H11_1208 0.56 +2.1 21,201 + Ac3H11_1208 0.56 +1.8 21,201 + Ac3H11_1208 0.56 +1.4 21,201 + Ac3H11_1208 0.56 +0.8 21,201 + Ac3H11_1208 0.56 +2.6 21,201 + Ac3H11_1208 0.56 +1.7 21,201 + Ac3H11_1208 0.56 +1.3 21,201 + Ac3H11_1208 0.56 +0.8 21,201 + Ac3H11_1208 0.56 +2.3 21,201 + Ac3H11_1208 0.56 +1.1 21,201 + Ac3H11_1208 0.56 +1.5 21,202 - Ac3H11_1208 0.56 +1.5 21,202 - Ac3H11_1208 0.56 +2.0 21,202 - Ac3H11_1208 0.56 +1.5 21,202 - Ac3H11_1208 0.56 +1.4 21,202 - Ac3H11_1208 0.56 +1.8 21,202 - Ac3H11_1208 0.56 +0.2 21,202 - Ac3H11_1208 0.56 +1.2 21,202 - Ac3H11_1208 0.56 +1.3 21,202 - Ac3H11_1208 0.56 +1.9 21,202 - Ac3H11_1208 0.56 +1.9 21,202 - Ac3H11_1208 0.56 +2.2 21,202 - Ac3H11_1208 0.56 +1.5 21,202 - Ac3H11_1208 0.56 +0.4 21,336 + Ac3H11_1208 0.59 +1.0 21,336 + Ac3H11_1208 0.59 +2.4 21,337 - Ac3H11_1208 0.59 +0.6 21,337 - Ac3H11_1208 0.59 +2.0 21,337 - Ac3H11_1208 0.59 +1.5 21,337 - Ac3H11_1208 0.59 +1.8 21,337 - Ac3H11_1208 0.59 +2.1 21,781 - Ac3H11_1208 0.70 +1.9 21,849 + Ac3H11_1208 0.72 +1.6 21,849 + Ac3H11_1208 0.72 +2.1 21,849 + Ac3H11_1208 0.72 +1.9 21,849 + Ac3H11_1208 0.72 +1.4 21,849 + Ac3H11_1208 0.72 +1.8 21,849 + Ac3H11_1208 0.72 +2.4 21,849 + Ac3H11_1208 0.72 +1.6 21,849 + Ac3H11_1208 0.72 +1.8 21,850 - Ac3H11_1208 0.72 +1.7 21,850 - Ac3H11_1208 0.72 +1.0 21,850 - Ac3H11_1208 0.72 +1.5 21,850 - Ac3H11_1208 0.72 +1.3 21,850 - Ac3H11_1208 0.72 +1.6 21,850 - Ac3H11_1208 0.72 +1.6 21,982 + Ac3H11_1208 0.75 +1.0 21,983 - Ac3H11_1208 0.75 +1.5 21,983 - Ac3H11_1208 0.75 +1.6 21,983 - Ac3H11_1208 0.75 +2.7 22,232 + Ac3H11_1208 0.81 -0.9 22,232 + Ac3H11_1208 0.81 +1.3 22,232 + Ac3H11_1208 0.81 +2.4 22,232 + Ac3H11_1208 0.81 +1.9 22,232 + Ac3H11_1208 0.81 +1.8 22,232 + Ac3H11_1208 0.81 +2.2 22,233 - Ac3H11_1208 0.81 +1.1 22,233 - Ac3H11_1208 0.81 +1.5 22,233 - Ac3H11_1208 0.81 +1.2 22,233 - Ac3H11_1208 0.81 +2.0 22,605 + Ac3H11_1208 0.90 +2.4 22,605 + Ac3H11_1208 0.90 +1.1 22,605 + Ac3H11_1208 0.90 +1.7 22,605 + Ac3H11_1208 0.90 +1.9 22,605 + Ac3H11_1208 0.90 +2.1 22,605 + Ac3H11_1208 0.90 +1.4 22,606 - +2.2 22,606 - +1.6 22,606 - +2.0 22,606 - +1.6 22,656 + +1.2 22,656 + +1.4 22,656 + +1.8 22,656 + +1.7 22,656 + +1.7 22,656 + +2.1 22,656 + +3.6 22,656 + +1.7 22,656 + +2.6 22,656 + +2.1 22,656 + +2.4 22,656 + +0.8 22,657 - +1.8 22,657 - +1.6 22,657 - +1.8 22,657 - +2.1 22,657 - +1.0 22,657 - +1.8 22,657 - +0.2 22,657 - +1.5 22,657 - +1.3 22,657 - +2.3 22,657 - +1.4 22,979 + +0.7 22,979 + +0.4 22,980 - +0.5 23,045 + +0.2 23,045 + +1.2 23,045 + +1.1 23,045 + +1.0 23,074 + -0.6 23,074 + +0.5 23,075 - +0.5 23,584 + Ac3H11_1209 0.17 -2.8 23,584 + Ac3H11_1209 0.17 -2.0 23,590 + Ac3H11_1209 0.17 -1.3 23,591 - Ac3H11_1209 0.17 -0.8 23,680 + Ac3H11_1209 0.21 -1.9 23,680 + Ac3H11_1209 0.21 +1.2 23,680 + Ac3H11_1209 0.21 +0.1 23,680 + Ac3H11_1209 0.21 -1.2 23,680 + Ac3H11_1209 0.21 -2.9 23,680 + Ac3H11_1209 0.21 -0.7 23,794 + Ac3H11_1209 0.25 -2.9 23,794 + Ac3H11_1209 0.25 -1.6 23,794 + Ac3H11_1209 0.25 -3.1 23,794 + Ac3H11_1209 0.25 -1.3 23,794 + Ac3H11_1209 0.25 -1.6 23,795 - Ac3H11_1209 0.25 -0.5
Or see this region's nucleotide sequence