Experiment: Fusidic 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1036 and Ac3H11_1037 overlap by 4 nucleotides Ac3H11_1037 and Ac3H11_1038 are separated by 167 nucleotides Ac3H11_1038 and Ac3H11_1039 are separated by 22 nucleotides Ac3H11_1039 and Ac3H11_1040 are separated by 66 nucleotides
Ac3H11_1036 - Isoquinoline 1-oxidoreductase beta subunit (EC 1.3.99.16), at 154,298 to 156,409
_1036
Ac3H11_1037 - Isoquinoline 1-oxidoreductase alpha subunit (EC 1.3.99.16), at 156,406 to 156,870
_1037
Ac3H11_1038 - suppressor for copper-sensitivity D, putative, at 157,038 to 157,625
_1038
Ac3H11_1039 - Phosphoserine phosphatase (EC 3.1.3.3), at 157,648 to 158,427
_1039
Ac3H11_1040 - hypothetical protein, at 158,494 to 158,688
_1040
Position (kb) 157
158 Strain fitness (log2 ratio) -1
0
1
2 at 156.179 kb on + strand, within Ac3H11_1036 at 156.179 kb on + strand, within Ac3H11_1036 at 156.179 kb on + strand, within Ac3H11_1036 at 156.179 kb on + strand, within Ac3H11_1036 at 156.180 kb on - strand, within Ac3H11_1036 at 156.261 kb on + strand at 156.261 kb on + strand at 156.262 kb on - strand at 156.262 kb on - strand at 156.282 kb on - strand at 157.035 kb on + strand at 157.035 kb on + strand at 157.039 kb on + strand at 157.120 kb on + strand, within Ac3H11_1038 at 157.222 kb on - strand, within Ac3H11_1038 at 157.316 kb on + strand, within Ac3H11_1038 at 157.316 kb on + strand, within Ac3H11_1038 at 157.317 kb on - strand, within Ac3H11_1038 at 157.317 kb on - strand, within Ac3H11_1038 at 157.317 kb on - strand, within Ac3H11_1038
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.001 mg/ml remove 156,179 + Ac3H11_1036 0.89 +1.9 156,179 + Ac3H11_1036 0.89 +0.4 156,179 + Ac3H11_1036 0.89 -1.4 156,179 + Ac3H11_1036 0.89 -0.5 156,180 - Ac3H11_1036 0.89 +0.8 156,261 + +0.2 156,261 + +0.2 156,262 - -0.9 156,262 - -0.5 156,282 - +0.3 157,035 + +0.7 157,035 + +0.4 157,039 + -0.4 157,120 + Ac3H11_1038 0.14 +0.5 157,222 - Ac3H11_1038 0.31 +0.8 157,316 + Ac3H11_1038 0.47 +0.6 157,316 + Ac3H11_1038 0.47 -0.4 157,317 - Ac3H11_1038 0.47 +0.7 157,317 - Ac3H11_1038 0.47 +1.3 157,317 - Ac3H11_1038 0.47 +0.9
Or see this region's nucleotide sequence