Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22865

Experiment: L-Proline (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Proline (C)
5,011,142	+				-0.8
5,011,142	+		AO353_22860	0.50	+0.9
5,011,142	+		AO353_22860	0.50	-2.0
5,011,142	+		AO353_22860	0.50	-1.4
5,011,143	-		AO353_22860	0.51	+0.2
5,011,143	-		AO353_22860	0.51	+1.2
5,011,143	-		AO353_22860	0.51	+0.6
5,011,143	-		AO353_22860	0.51	-0.1
5,011,143	-		AO353_22860	0.51	+1.4
5,011,143	-		AO353_22860	0.51	+0.6
5,011,175	+		AO353_22860	0.53	+1.6
5,011,176	-		AO353_22860	0.53	-1.4
5,011,178	+		AO353_22860	0.53	-0.4
5,011,178	+		AO353_22860	0.53	+1.2
5,011,178	+		AO353_22860	0.53	-0.4
5,011,178	+		AO353_22860	0.53	-1.8
5,011,179	-		AO353_22860	0.53	-1.4
5,011,179	-		AO353_22860	0.53	-3.2
5,011,179	-		AO353_22860	0.53	+0.2
5,011,268	+		AO353_22860	0.59	-1.0
5,011,269	-		AO353_22860	0.59	+2.8
5,011,269	-		AO353_22860	0.59	+0.2
5,011,373	+		AO353_22860	0.67	-0.4
5,011,374	-		AO353_22860	0.67	-1.0
5,011,374	-		AO353_22860	0.67	+0.2
5,011,374	-		AO353_22860	0.67	+0.4
5,011,374	-		AO353_22860	0.67	+1.9
5,011,479	-		AO353_22860	0.74	-0.1
5,011,496	+		AO353_22860	0.75	-0.4
5,011,578	-		AO353_22860	0.81	-0.4
5,011,610	+		AO353_22860	0.83	+0.2
5,011,613	+				+0.6
5,011,613	+		AO353_22860	0.83	-0.4
5,011,613	+		AO353_22860	0.83	+1.6
5,011,613	+		AO353_22860	0.83	+1.6
5,011,814	+				-2.0
5,011,814	+				-0.4
5,011,815	-				+0.0
5,011,815	-				+1.2
5,011,815	-				+1.6
5,011,819	-				+1.2
5,011,819	-				-2.2
5,011,820	+				+0.0
5,011,820	+				+0.2
5,011,820	+				+0.2
5,011,820	+				-0.4
5,011,820	+				-0.4
5,011,821	-				-0.4
5,011,911	+				+0.4
5,011,912	-				-0.4
5,011,912	-				+0.2
5,012,056	+				-0.5
5,012,057	-				-1.3
5,012,116	+				-0.4
5,012,116	+				+1.7
5,012,116	+				+0.2
5,012,116	+				+0.6
5,012,116	+				-0.8
5,012,116	+				+0.8
5,012,116	+				+0.6
5,012,116	+				+0.6
5,012,116	+				+1.2
5,012,116	+				+0.4
5,012,117	-				-0.8
5,012,117	-				-0.6
5,012,117	-				+1.2
5,012,117	-				+0.6
5,012,117	-				-0.8
5,012,117	-				-0.4
5,012,117	-				+1.6
5,012,122	+				-0.1
5,012,122	+				-0.4
5,012,123	-				-0.4
5,012,132	-				-1.2
5,012,248	+				+0.8
5,012,248	+				+1.2
5,012,248	+				+0.6
5,012,248	+				-1.7
5,012,248	+				-2.0
5,012,249	-				-0.8
5,012,249	-				-2.3
5,012,249	-				+1.6
5,012,266	+				+2.4
5,012,266	+				+0.2
5,012,266	+				+0.6
5,012,266	+				-0.4
5,012,267	-				-0.8
5,012,267	-				-1.4
5,012,267	-				+0.1
5,012,267	-				+1.6
5,012,320	-		AO353_22865	0.12	+0.5
5,012,344	+		AO353_22865	0.14	+1.3
5,012,344	+		AO353_22865	0.14	-3.0
5,012,604	+		AO353_22865	0.29	+1.9
5,012,605	-		AO353_22865	0.29	-0.8
5,012,605	-		AO353_22865	0.29	-2.7
5,012,605	-		AO353_22865	0.29	-1.0
5,012,674	+		AO353_22865	0.34	+2.6
5,012,674	+		AO353_22865	0.34	-1.4
5,012,675	-		AO353_22865	0.34	+0.6
5,012,675	-		AO353_22865	0.34	-1.7
5,012,675	-		AO353_22865	0.34	-2.0
5,012,798	-		AO353_22865	0.41	+0.6
5,012,798	-		AO353_22865	0.41	-0.7
5,012,822	-		AO353_22865	0.42	+0.2
5,012,851	+		AO353_22865	0.44	+0.2
5,012,851	+		AO353_22865	0.44	-0.4
5,012,851	+		AO353_22865	0.44	-0.4
5,012,851	+		AO353_22865	0.44	-0.4
5,012,851	+		AO353_22865	0.44	+0.3
5,012,852	-		AO353_22865	0.44	-1.4
5,012,852	-		AO353_22865	0.44	-0.4
5,012,852	-		AO353_22865	0.44	-1.0
5,013,004	+		AO353_22865	0.53	-0.6
5,013,004	+		AO353_22865	0.53	-0.2
5,013,004	+		AO353_22865	0.53	-2.0
5,013,005	-		AO353_22865	0.53	+2.4
5,013,005	-		AO353_22865	0.53	-0.8
5,013,005	-		AO353_22865	0.53	-0.4
5,013,005	-		AO353_22865	0.53	-1.2
5,013,005	-		AO353_22865	0.53	-0.1
5,013,104	+		AO353_22865	0.59	-1.1
5,013,105	-		AO353_22865	0.59	+0.9
5,013,105	-		AO353_22865	0.59	-1.0
5,013,105	-		AO353_22865	0.59	-1.1
5,013,105	-		AO353_22865	0.59	-0.8
5,013,105	-		AO353_22865	0.59	-0.6
5,013,113	-		AO353_22865	0.60	-2.0
5,013,445	+		AO353_22865	0.80	-1.4
5,013,446	-		AO353_22865	0.80	+1.6
5,013,645	-				-2.7
5,013,788	+				-1.4
5,013,788	+				+0.1
5,013,788	+				+0.8
5,013,788	+				-1.7
5,013,788	+				+0.6
5,013,789	-				-0.8
5,013,789	-				-0.9
5,013,821	+				-0.4
5,013,822	-				-1.4
5,013,822	-				-0.4
5,014,003	+		AO353_22870	0.44	-0.4
5,014,050	+		AO353_22870	0.54	-0.4
5,014,050	+		AO353_22870	0.54	+0.6
5,014,062	+		AO353_22870	0.56	+1.9
5,014,062	+		AO353_22870	0.56	+0.2
5,014,062	+		AO353_22870	0.56	+0.2
5,014,062	+		AO353_22870	0.56	+0.6
5,014,063	-		AO353_22870	0.57	-0.4
5,014,230	+				-1.2
5,014,231	-				-2.0
5,014,282	+				+0.1
5,014,282	+				-2.0
5,014,282	+				-1.5
5,014,283	-				+0.6
5,014,283	-				-1.7
5,014,343	+				-0.1
5,014,343	+				+0.6
5,014,344	-				-1.8
5,014,346	+				-1.0
5,014,347	-				-1.4
5,014,347	-				-1.4
5,014,347	-				+0.9
5,014,356	+				+0.9
5,014,422	+				-0.4
5,014,422	+				-2.0
5,014,422	+				+0.6
5,014,573	-		AO353_22875	0.15	+1.6
5,014,617	+		AO353_22875	0.19	-1.4
5,014,617	+		AO353_22875	0.19	+0.4
5,014,617	+		AO353_22875	0.19	+0.4
5,014,618	-		AO353_22875	0.19	+0.2
5,014,618	-		AO353_22875	0.19	-1.0
5,014,618	-		AO353_22875	0.19	+0.6
5,014,618	-		AO353_22875	0.19	+0.8
5,014,618	-		AO353_22875	0.19	-1.0
5,014,618	-		AO353_22875	0.19	-1.4
5,014,680	+				-0.4
5,014,680	+		AO353_22875	0.23	+0.0
5,014,680	+		AO353_22875	0.23	+0.0
5,014,680	+		AO353_22875	0.23	-0.8
5,014,680	+		AO353_22875	0.23	+0.9
5,014,680	+		AO353_22875	0.23	+0.1
5,014,681	-		AO353_22875	0.23	+1.1
5,014,681	-		AO353_22875	0.23	+0.6
5,014,681	-		AO353_22875	0.23	+0.8
5,014,681	-		AO353_22875	0.23	-0.4
5,014,729	-		AO353_22875	0.27	+0.6
5,014,729	-		AO353_22875	0.27	-1.1