Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS14510 and ABZR86_RS14515 are separated by 13 nucleotides ABZR86_RS14515 and ABZR86_RS14520 are separated by 31 nucleotides ABZR86_RS14520 and ABZR86_RS14525 are separated by 77 nucleotides ABZR86_RS14525 and ABZR86_RS14530 overlap by 8 nucleotides ABZR86_RS14530 and ABZR86_RS14535 are separated by 40 nucleotides
ABZR86_RS14510: ABZR86_RS14510 - tail fiber protein, at 3,254,155 to 3,254,655
_RS14510
ABZR86_RS14515: ABZR86_RS14515 - tail fiber protein, at 3,254,669 to 3,255,199
_RS14515
ABZR86_RS14520: ABZR86_RS14520 - tail fiber protein, at 3,255,231 to 3,255,770
_RS14520
ABZR86_RS14525: ABZR86_RS14525 - GNAT family N-acetyltransferase, at 3,255,848 to 3,256,330
_RS14525
ABZR86_RS14530: ABZR86_RS14530 - hypothetical protein, at 3,256,323 to 3,256,619
_RS14530
ABZR86_RS14535: ABZR86_RS14535 - hypothetical protein, at 3,256,660 to 3,256,887
_RS14535
Position (kb)
3255
3256 Strain fitness (log2 ratio)
-1
0
1
2 at 3254.285 kb on - strand, within ABZR86_RS14510 at 3254.287 kb on + strand, within ABZR86_RS14510 at 3254.287 kb on + strand, within ABZR86_RS14510 at 3254.288 kb on - strand, within ABZR86_RS14510 at 3254.515 kb on + strand, within ABZR86_RS14510 at 3254.515 kb on + strand, within ABZR86_RS14510 at 3254.515 kb on + strand, within ABZR86_RS14510 at 3254.516 kb on - strand, within ABZR86_RS14510 at 3254.516 kb on - strand, within ABZR86_RS14510 at 3254.638 kb on + strand at 3254.639 kb on - strand at 3254.681 kb on + strand at 3254.681 kb on + strand at 3254.681 kb on + strand at 3254.681 kb on + strand at 3254.681 kb on + strand at 3254.681 kb on + strand at 3254.682 kb on - strand at 3254.682 kb on - strand at 3254.682 kb on - strand at 3254.682 kb on - strand at 3254.682 kb on - strand at 3254.682 kb on - strand at 3254.768 kb on + strand, within ABZR86_RS14515 at 3254.769 kb on - strand, within ABZR86_RS14515 at 3254.780 kb on + strand, within ABZR86_RS14515 at 3254.780 kb on + strand, within ABZR86_RS14515 at 3254.780 kb on + strand, within ABZR86_RS14515 at 3254.780 kb on + strand, within ABZR86_RS14515 at 3254.781 kb on - strand, within ABZR86_RS14515 at 3254.801 kb on + strand, within ABZR86_RS14515 at 3254.891 kb on + strand, within ABZR86_RS14515 at 3254.891 kb on + strand, within ABZR86_RS14515 at 3254.892 kb on - strand, within ABZR86_RS14515 at 3254.892 kb on - strand, within ABZR86_RS14515 at 3254.892 kb on - strand, within ABZR86_RS14515 at 3254.892 kb on - strand, within ABZR86_RS14515 at 3254.892 kb on - strand, within ABZR86_RS14515 at 3254.892 kb on - strand, within ABZR86_RS14515 at 3254.956 kb on + strand, within ABZR86_RS14515 at 3254.966 kb on + strand, within ABZR86_RS14515 at 3254.966 kb on + strand, within ABZR86_RS14515 at 3254.966 kb on + strand, within ABZR86_RS14515 at 3254.966 kb on + strand, within ABZR86_RS14515 at 3254.966 kb on + strand, within ABZR86_RS14515 at 3254.966 kb on + strand, within ABZR86_RS14515 at 3254.966 kb on + strand, within ABZR86_RS14515 at 3254.967 kb on - strand, within ABZR86_RS14515 at 3254.967 kb on - strand, within ABZR86_RS14515 at 3254.967 kb on - strand, within ABZR86_RS14515 at 3254.969 kb on + strand, within ABZR86_RS14515 at 3254.969 kb on + strand, within ABZR86_RS14515 at 3254.969 kb on + strand, within ABZR86_RS14515 at 3254.969 kb on + strand, within ABZR86_RS14515 at 3254.969 kb on + strand, within ABZR86_RS14515 at 3255.048 kb on - strand, within ABZR86_RS14515 at 3255.048 kb on - strand, within ABZR86_RS14515 at 3255.264 kb on + strand at 3255.264 kb on + strand at 3255.286 kb on - strand, within ABZR86_RS14520 at 3255.286 kb on - strand, within ABZR86_RS14520 at 3255.332 kb on + strand, within ABZR86_RS14520 at 3255.402 kb on + strand, within ABZR86_RS14520 at 3255.402 kb on + strand, within ABZR86_RS14520 at 3255.537 kb on + strand, within ABZR86_RS14520 at 3255.538 kb on - strand, within ABZR86_RS14520 at 3255.538 kb on - strand, within ABZR86_RS14520 at 3255.538 kb on - strand, within ABZR86_RS14520 at 3255.557 kb on + strand, within ABZR86_RS14520 at 3255.714 kb on + strand, within ABZR86_RS14520 at 3255.899 kb on + strand, within ABZR86_RS14525 at 3255.909 kb on + strand, within ABZR86_RS14525 at 3255.909 kb on + strand, within ABZR86_RS14525 at 3255.910 kb on - strand, within ABZR86_RS14525 at 3255.910 kb on - strand, within ABZR86_RS14525 at 3255.998 kb on + strand, within ABZR86_RS14525 at 3255.998 kb on + strand, within ABZR86_RS14525 at 3255.999 kb on - strand, within ABZR86_RS14525 at 3255.999 kb on - strand, within ABZR86_RS14525 at 3255.999 kb on - strand, within ABZR86_RS14525 at 3255.999 kb on - strand, within ABZR86_RS14525 at 3256.025 kb on + strand, within ABZR86_RS14525 at 3256.067 kb on + strand, within ABZR86_RS14525 at 3256.067 kb on + strand, within ABZR86_RS14525 at 3256.495 kb on + strand, within ABZR86_RS14530 at 3256.703 kb on + strand, within ABZR86_RS14535 at 3256.704 kb on - strand, within ABZR86_RS14535
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 3,254,285 - ABZR86_RS14510 0.26 +0.3 3,254,287 + ABZR86_RS14510 0.26 +0.1 3,254,287 + ABZR86_RS14510 0.26 +0.3 3,254,288 - ABZR86_RS14510 0.27 +0.2 3,254,515 + ABZR86_RS14510 0.72 +0.3 3,254,515 + ABZR86_RS14510 0.72 -0.1 3,254,515 + ABZR86_RS14510 0.72 +0.0 3,254,516 - ABZR86_RS14510 0.72 -0.1 3,254,516 - ABZR86_RS14510 0.72 -0.1 3,254,638 + +0.1 3,254,639 - +0.7 3,254,681 + -0.3 3,254,681 + +0.3 3,254,681 + +0.1 3,254,681 + -0.2 3,254,681 + -0.7 3,254,681 + +0.1 3,254,682 - -0.3 3,254,682 - +0.6 3,254,682 - -1.1 3,254,682 - +0.2 3,254,682 - -0.1 3,254,682 - -1.2 3,254,768 + ABZR86_RS14515 0.19 -0.3 3,254,769 - ABZR86_RS14515 0.19 -0.4 3,254,780 + ABZR86_RS14515 0.21 -1.0 3,254,780 + ABZR86_RS14515 0.21 +0.3 3,254,780 + ABZR86_RS14515 0.21 +0.2 3,254,780 + ABZR86_RS14515 0.21 +0.4 3,254,781 - ABZR86_RS14515 0.21 -0.2 3,254,801 + ABZR86_RS14515 0.25 -0.4 3,254,891 + ABZR86_RS14515 0.42 -0.1 3,254,891 + ABZR86_RS14515 0.42 +0.1 3,254,892 - ABZR86_RS14515 0.42 +0.4 3,254,892 - ABZR86_RS14515 0.42 +0.2 3,254,892 - ABZR86_RS14515 0.42 +0.3 3,254,892 - ABZR86_RS14515 0.42 +0.7 3,254,892 - ABZR86_RS14515 0.42 -0.6 3,254,892 - ABZR86_RS14515 0.42 -0.1 3,254,956 + ABZR86_RS14515 0.54 +0.1 3,254,966 + ABZR86_RS14515 0.56 -0.6 3,254,966 + ABZR86_RS14515 0.56 +0.0 3,254,966 + ABZR86_RS14515 0.56 +0.1 3,254,966 + ABZR86_RS14515 0.56 +0.0 3,254,966 + ABZR86_RS14515 0.56 -0.2 3,254,966 + ABZR86_RS14515 0.56 -0.2 3,254,966 + ABZR86_RS14515 0.56 -0.4 3,254,967 - ABZR86_RS14515 0.56 +0.1 3,254,967 - ABZR86_RS14515 0.56 +0.4 3,254,967 - ABZR86_RS14515 0.56 -0.5 3,254,969 + ABZR86_RS14515 0.56 +0.5 3,254,969 + ABZR86_RS14515 0.56 +0.3 3,254,969 + ABZR86_RS14515 0.56 -0.6 3,254,969 + ABZR86_RS14515 0.56 -0.1 3,254,969 + ABZR86_RS14515 0.56 +0.1 3,255,048 - ABZR86_RS14515 0.71 -0.1 3,255,048 - ABZR86_RS14515 0.71 +2.1 3,255,264 + +0.2 3,255,264 + -0.2 3,255,286 - ABZR86_RS14520 0.10 -0.6 3,255,286 - ABZR86_RS14520 0.10 +0.9 3,255,332 + ABZR86_RS14520 0.19 -0.2 3,255,402 + ABZR86_RS14520 0.32 -0.9 3,255,402 + ABZR86_RS14520 0.32 +0.1 3,255,537 + ABZR86_RS14520 0.57 -0.4 3,255,538 - ABZR86_RS14520 0.57 +0.6 3,255,538 - ABZR86_RS14520 0.57 -0.7 3,255,538 - ABZR86_RS14520 0.57 +0.0 3,255,557 + ABZR86_RS14520 0.60 +0.2 3,255,714 + ABZR86_RS14520 0.89 +0.1 3,255,899 + ABZR86_RS14525 0.11 -0.6 3,255,909 + ABZR86_RS14525 0.13 -0.0 3,255,909 + ABZR86_RS14525 0.13 -0.5 3,255,910 - ABZR86_RS14525 0.13 -0.1 3,255,910 - ABZR86_RS14525 0.13 +0.0 3,255,998 + ABZR86_RS14525 0.31 +0.6 3,255,998 + ABZR86_RS14525 0.31 +0.8 3,255,999 - ABZR86_RS14525 0.31 -0.0 3,255,999 - ABZR86_RS14525 0.31 +0.3 3,255,999 - ABZR86_RS14525 0.31 -0.5 3,255,999 - ABZR86_RS14525 0.31 -1.7 3,256,025 + ABZR86_RS14525 0.37 -0.4 3,256,067 + ABZR86_RS14525 0.45 -0.1 3,256,067 + ABZR86_RS14525 0.45 -0.7 3,256,495 + ABZR86_RS14530 0.58 -0.6 3,256,703 + ABZR86_RS14535 0.19 +0.2 3,256,704 - ABZR86_RS14535 0.19 +0.3
Or see this region's nucleotide sequence