Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS13585

Experiment: LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS13580 and ABZR86_RS13585 are separated by 0 nucleotidesABZR86_RS13585 and ABZR86_RS13590 are separated by 95 nucleotides ABZR86_RS13580: ABZR86_RS13580 - pteridine-dependent deoxygenase, at 3,039,129 to 3,040,121 _RS13580 ABZR86_RS13585: ABZR86_RS13585 - DUF4850 domain-containing protein, at 3,040,122 to 3,040,898 _RS13585 ABZR86_RS13590: ABZR86_RS13590 - bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU, at 3,040,994 to 3,042,361 _RS13590 Position (kb) 3040 3041Strain fitness (log2 ratio) -2 -1 0 1 2at 3039.193 kb on - strandat 3039.193 kb on - strandat 3039.289 kb on - strand, within ABZR86_RS13580at 3039.337 kb on + strand, within ABZR86_RS13580at 3039.337 kb on + strand, within ABZR86_RS13580at 3039.337 kb on + strand, within ABZR86_RS13580at 3039.337 kb on + strand, within ABZR86_RS13580at 3039.337 kb on + strand, within ABZR86_RS13580at 3039.337 kb on + strand, within ABZR86_RS13580at 3039.338 kb on - strand, within ABZR86_RS13580at 3039.338 kb on - strand, within ABZR86_RS13580at 3039.338 kb on - strand, within ABZR86_RS13580at 3039.537 kb on + strand, within ABZR86_RS13580at 3039.537 kb on + strand, within ABZR86_RS13580at 3039.537 kb on + strand, within ABZR86_RS13580at 3039.537 kb on + strand, within ABZR86_RS13580at 3039.537 kb on + strand, within ABZR86_RS13580at 3039.538 kb on - strand, within ABZR86_RS13580at 3039.538 kb on - strand, within ABZR86_RS13580at 3039.538 kb on - strand, within ABZR86_RS13580at 3039.579 kb on + strand, within ABZR86_RS13580at 3039.579 kb on + strand, within ABZR86_RS13580at 3039.579 kb on + strand, within ABZR86_RS13580at 3039.579 kb on + strand, within ABZR86_RS13580at 3039.579 kb on + strand, within ABZR86_RS13580at 3039.690 kb on + strand, within ABZR86_RS13580at 3039.691 kb on - strand, within ABZR86_RS13580at 3039.691 kb on - strand, within ABZR86_RS13580at 3039.691 kb on - strand, within ABZR86_RS13580at 3039.691 kb on - strand, within ABZR86_RS13580at 3039.981 kb on + strand, within ABZR86_RS13580at 3039.982 kb on - strand, within ABZR86_RS13580at 3039.982 kb on - strand, within ABZR86_RS13580at 3039.982 kb on - strand, within ABZR86_RS13580at 3039.982 kb on - strand, within ABZR86_RS13580at 3039.982 kb on - strand, within ABZR86_RS13580at 3040.113 kb on + strandat 3040.114 kb on - strandat 3040.222 kb on + strand, within ABZR86_RS13585at 3040.223 kb on - strand, within ABZR86_RS13585at 3040.264 kb on - strand, within ABZR86_RS13585at 3040.426 kb on + strand, within ABZR86_RS13585at 3040.426 kb on + strand, within ABZR86_RS13585at 3040.426 kb on + strand, within ABZR86_RS13585at 3040.426 kb on + strand, within ABZR86_RS13585at 3040.427 kb on - strand, within ABZR86_RS13585at 3040.427 kb on - strand, within ABZR86_RS13585at 3040.427 kb on - strand, within ABZR86_RS13585at 3040.427 kb on - strand, within ABZR86_RS13585at 3040.427 kb on - strand, within ABZR86_RS13585at 3040.427 kb on - strand, within ABZR86_RS13585at 3040.588 kb on + strand, within ABZR86_RS13585at 3040.588 kb on + strand, within ABZR86_RS13585at 3040.589 kb on - strand, within ABZR86_RS13585at 3040.589 kb on - strand, within ABZR86_RS13585at 3040.589 kb on - strand, within ABZR86_RS13585at 3040.589 kb on - strand, within ABZR86_RS13585at 3040.762 kb on + strand, within ABZR86_RS13585at 3040.763 kb on - strand, within ABZR86_RS13585at 3040.763 kb on - strand, within ABZR86_RS13585at 3040.763 kb on - strand, within ABZR86_RS13585at 3040.786 kb on + strand, within ABZR86_RS13585at 3040.786 kb on + strand, within ABZR86_RS13585at 3040.786 kb on + strand, within ABZR86_RS13585at 3040.786 kb on + strand, within ABZR86_RS13585at 3040.787 kb on - strand, within ABZR86_RS13585at 3040.995 kb on + strandat 3040.995 kb on + strandat 3040.996 kb on - strandat 3040.996 kb on - strandat 3040.996 kb on - strandat 3040.996 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB
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3,039,193 - -0.3
3,039,193 - -0.3
3,039,289 - ABZR86_RS13580 0.16 +2.2
3,039,337 + ABZR86_RS13580 0.21 +0.5
3,039,337 + ABZR86_RS13580 0.21 +0.8
3,039,337 + ABZR86_RS13580 0.21 +0.1
3,039,337 + ABZR86_RS13580 0.21 +0.0
3,039,337 + ABZR86_RS13580 0.21 -0.1
3,039,337 + ABZR86_RS13580 0.21 +0.2
3,039,338 - ABZR86_RS13580 0.21 -0.1
3,039,338 - ABZR86_RS13580 0.21 -0.2
3,039,338 - ABZR86_RS13580 0.21 +0.2
3,039,537 + ABZR86_RS13580 0.41 +0.1
3,039,537 + ABZR86_RS13580 0.41 +0.3
3,039,537 + ABZR86_RS13580 0.41 +0.3
3,039,537 + ABZR86_RS13580 0.41 +0.6
3,039,537 + ABZR86_RS13580 0.41 +0.4
3,039,538 - ABZR86_RS13580 0.41 +0.1
3,039,538 - ABZR86_RS13580 0.41 -0.9
3,039,538 - ABZR86_RS13580 0.41 -0.3
3,039,579 + ABZR86_RS13580 0.45 +0.8
3,039,579 + ABZR86_RS13580 0.45 -0.0
3,039,579 + ABZR86_RS13580 0.45 -0.4
3,039,579 + ABZR86_RS13580 0.45 +0.2
3,039,579 + ABZR86_RS13580 0.45 +0.2
3,039,690 + ABZR86_RS13580 0.56 +0.6
3,039,691 - ABZR86_RS13580 0.57 +0.0
3,039,691 - ABZR86_RS13580 0.57 -0.9
3,039,691 - ABZR86_RS13580 0.57 +0.3
3,039,691 - ABZR86_RS13580 0.57 -0.5
3,039,981 + ABZR86_RS13580 0.86 +0.2
3,039,982 - ABZR86_RS13580 0.86 +0.1
3,039,982 - ABZR86_RS13580 0.86 -0.5
3,039,982 - ABZR86_RS13580 0.86 -0.3
3,039,982 - ABZR86_RS13580 0.86 -0.6
3,039,982 - ABZR86_RS13580 0.86 -0.3
3,040,113 + +0.3
3,040,114 - +0.3
3,040,222 + ABZR86_RS13585 0.13 +0.8
3,040,223 - ABZR86_RS13585 0.13 -0.3
3,040,264 - ABZR86_RS13585 0.18 -0.2
3,040,426 + ABZR86_RS13585 0.39 -0.7
3,040,426 + ABZR86_RS13585 0.39 +2.6
3,040,426 + ABZR86_RS13585 0.39 -1.3
3,040,426 + ABZR86_RS13585 0.39 +0.1
3,040,427 - ABZR86_RS13585 0.39 +0.9
3,040,427 - ABZR86_RS13585 0.39 +0.9
3,040,427 - ABZR86_RS13585 0.39 +0.4
3,040,427 - ABZR86_RS13585 0.39 -0.0
3,040,427 - ABZR86_RS13585 0.39 +0.3
3,040,427 - ABZR86_RS13585 0.39 +0.4
3,040,588 + ABZR86_RS13585 0.60 -0.5
3,040,588 + ABZR86_RS13585 0.60 +1.1
3,040,589 - ABZR86_RS13585 0.60 +0.2
3,040,589 - ABZR86_RS13585 0.60 +0.1
3,040,589 - ABZR86_RS13585 0.60 +0.0
3,040,589 - ABZR86_RS13585 0.60 -0.8
3,040,762 + ABZR86_RS13585 0.82 +0.0
3,040,763 - ABZR86_RS13585 0.82 +0.6
3,040,763 - ABZR86_RS13585 0.82 -0.3
3,040,763 - ABZR86_RS13585 0.82 -0.7
3,040,786 + ABZR86_RS13585 0.85 +0.2
3,040,786 + ABZR86_RS13585 0.85 -1.8
3,040,786 + ABZR86_RS13585 0.85 -0.4
3,040,786 + ABZR86_RS13585 0.85 -1.3
3,040,787 - ABZR86_RS13585 0.86 -0.5
3,040,995 + -0.3
3,040,995 + +1.0
3,040,996 - +0.3
3,040,996 - +0.1
3,040,996 - -0.5
3,040,996 - +0.1

Or see this region's nucleotide sequence