Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS01320 and ABZR86_RS01325 are separated by 48 nucleotides ABZR86_RS01325 and ABZR86_RS01330 are separated by 10 nucleotides ABZR86_RS01330 and ABZR86_RS01335 are separated by 37 nucleotides ABZR86_RS01335 and ABZR86_RS01340 overlap by 4 nucleotides
ABZR86_RS01320: ABZR86_RS01320 - enolase C-terminal domain-like protein, at 277,058 to 278,386
_RS01320
ABZR86_RS01325: ABZR86_RS01325 - fumarylacetoacetate hydrolase family protein, at 278,435 to 279,301
_RS01325
ABZR86_RS01330: ABZR86_RS01330 - SDR family oxidoreductase, at 279,312 to 280,058
_RS01330
ABZR86_RS01335: ABZR86_RS01335 - amidohydrolase family protein, at 280,096 to 280,986
_RS01335
ABZR86_RS01340: ABZR86_RS01340 - aldo/keto reductase, at 280,983 to 282,011
_RS01340
Position (kb) 279
280
281 Strain fitness (log2 ratio) -1
0
1 at 278.343 kb on + strand at 278.343 kb on + strand at 278.421 kb on + strand at 278.421 kb on + strand at 278.422 kb on - strand at 278.422 kb on - strand at 278.535 kb on + strand, within ABZR86_RS01325 at 278.535 kb on + strand, within ABZR86_RS01325 at 278.535 kb on + strand, within ABZR86_RS01325 at 278.536 kb on - strand, within ABZR86_RS01325 at 278.536 kb on - strand, within ABZR86_RS01325 at 278.613 kb on + strand, within ABZR86_RS01325 at 278.614 kb on - strand, within ABZR86_RS01325 at 278.623 kb on + strand, within ABZR86_RS01325 at 278.623 kb on + strand, within ABZR86_RS01325 at 278.624 kb on - strand, within ABZR86_RS01325 at 278.625 kb on + strand, within ABZR86_RS01325 at 278.625 kb on + strand, within ABZR86_RS01325 at 278.625 kb on + strand, within ABZR86_RS01325 at 278.626 kb on - strand, within ABZR86_RS01325 at 278.626 kb on - strand, within ABZR86_RS01325 at 278.626 kb on - strand, within ABZR86_RS01325 at 278.626 kb on - strand, within ABZR86_RS01325 at 279.063 kb on + strand, within ABZR86_RS01325 at 279.063 kb on + strand, within ABZR86_RS01325 at 279.064 kb on - strand, within ABZR86_RS01325 at 279.064 kb on - strand, within ABZR86_RS01325 at 279.195 kb on + strand, within ABZR86_RS01325 at 279.195 kb on + strand, within ABZR86_RS01325 at 279.195 kb on + strand, within ABZR86_RS01325 at 279.195 kb on + strand, within ABZR86_RS01325 at 279.195 kb on + strand, within ABZR86_RS01325 at 279.383 kb on - strand at 279.802 kb on + strand, within ABZR86_RS01330 at 279.802 kb on + strand, within ABZR86_RS01330 at 279.802 kb on + strand, within ABZR86_RS01330 at 279.803 kb on - strand, within ABZR86_RS01330 at 280.238 kb on + strand, within ABZR86_RS01335 at 280.920 kb on - strand at 280.943 kb on + strand at 280.944 kb on - strand at 280.944 kb on - strand at 280.964 kb on - strand at 280.964 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 278,343 + +0.3 278,343 + -0.0 278,421 + +0.0 278,421 + +0.1 278,422 - +1.4 278,422 - +0.1 278,535 + ABZR86_RS01325 0.12 +1.4 278,535 + ABZR86_RS01325 0.12 -0.2 278,535 + ABZR86_RS01325 0.12 -1.3 278,536 - ABZR86_RS01325 0.12 -0.3 278,536 - ABZR86_RS01325 0.12 +0.2 278,613 + ABZR86_RS01325 0.21 -0.0 278,614 - ABZR86_RS01325 0.21 -0.4 278,623 + ABZR86_RS01325 0.22 +0.1 278,623 + ABZR86_RS01325 0.22 +0.1 278,624 - ABZR86_RS01325 0.22 -0.0 278,625 + ABZR86_RS01325 0.22 -0.2 278,625 + ABZR86_RS01325 0.22 -0.1 278,625 + ABZR86_RS01325 0.22 +0.2 278,626 - ABZR86_RS01325 0.22 +0.5 278,626 - ABZR86_RS01325 0.22 +0.0 278,626 - ABZR86_RS01325 0.22 -1.2 278,626 - ABZR86_RS01325 0.22 +0.4 279,063 + ABZR86_RS01325 0.72 +0.9 279,063 + ABZR86_RS01325 0.72 -0.1 279,064 - ABZR86_RS01325 0.73 +0.3 279,064 - ABZR86_RS01325 0.73 -0.3 279,195 + ABZR86_RS01325 0.88 -0.3 279,195 + ABZR86_RS01325 0.88 +0.0 279,195 + ABZR86_RS01325 0.88 +0.1 279,195 + ABZR86_RS01325 0.88 -0.3 279,195 + ABZR86_RS01325 0.88 +0.1 279,383 - -0.1 279,802 + ABZR86_RS01330 0.66 +0.1 279,802 + ABZR86_RS01330 0.66 -0.1 279,802 + ABZR86_RS01330 0.66 +0.2 279,803 - ABZR86_RS01330 0.66 -0.4 280,238 + ABZR86_RS01335 0.16 +0.0 280,920 - +0.0 280,943 + -0.0 280,944 - +0.4 280,944 - -0.1 280,964 - +0.5 280,964 - +1.0
Or see this region's nucleotide sequence