Strain Fitness in Shewanella loihica PV-4 around Shew_2275

Experiment: Chlorite 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chlorite 200 mM
2,657,289	-		Shew_2274	0.48	+1.2
2,657,317	-		Shew_2274	0.50	-0.7
2,657,329	-		Shew_2274	0.50	+0.6
2,657,342	+		Shew_2274	0.51	-1.7
2,657,342	+		Shew_2274	0.51	+0.3
2,657,350	+		Shew_2274	0.52	-0.8
2,657,351	-		Shew_2274	0.52	-1.7
2,657,363	-		Shew_2274	0.52	-0.7
2,657,363	-		Shew_2274	0.52	-1.7
2,657,372	-		Shew_2274	0.53	-2.7
2,657,372	-		Shew_2274	0.53	-0.7
2,657,392	+		Shew_2274	0.54	+0.2
2,657,396	+		Shew_2274	0.54	-1.0
2,657,397	+		Shew_2274	0.54	-1.8
2,657,397	+		Shew_2274	0.54	+1.3
2,657,400	-		Shew_2274	0.54	+0.3
2,657,400	-		Shew_2274	0.54	-0.1
2,657,400	-		Shew_2274	0.54	-1.3
2,657,405	-		Shew_2274	0.55	-2.3
2,657,429	+		Shew_2274	0.56	-0.9
2,657,446	-		Shew_2274	0.57	-0.7
2,657,446	-		Shew_2274	0.57	-1.3
2,657,490	+		Shew_2274	0.59	-0.7
2,657,500	+		Shew_2274	0.60	+0.0
2,657,500	+		Shew_2274	0.60	+1.6
2,657,500	+		Shew_2274	0.60	-2.0
2,657,500	+		Shew_2274	0.60	+0.3
2,657,500	+		Shew_2274	0.60	+0.8
2,657,500	+		Shew_2274	0.60	-2.7
2,657,500	+		Shew_2274	0.60	+0.3
2,657,500	+		Shew_2274	0.60	-2.7
2,657,508	-		Shew_2274	0.60	-0.5
2,657,508	-		Shew_2274	0.60	-0.9
2,657,508	-		Shew_2274	0.60	-1.6
2,657,550	+		Shew_2274	0.63	+1.0
2,657,550	+		Shew_2274	0.63	-1.1
2,657,550	+		Shew_2274	0.63	-0.2
2,657,550	+		Shew_2274	0.63	+0.5
2,657,558	-		Shew_2274	0.63	+0.3
2,657,558	-		Shew_2274	0.63	+0.3
2,657,558	-		Shew_2274	0.63	-1.7
2,657,558	-		Shew_2274	0.63	-0.1
2,657,675	+		Shew_2274	0.69	-0.5
2,657,675	+		Shew_2274	0.69	-0.8
2,657,683	-		Shew_2274	0.70	-0.0
2,657,685	+		Shew_2274	0.70	-1.3
2,657,685	+		Shew_2274	0.70	-0.7
2,657,685	+		Shew_2274	0.70	+0.6
2,657,685	+		Shew_2274	0.70	+0.2
2,657,685	+		Shew_2274	0.70	-0.5
2,657,685	+		Shew_2274	0.70	-1.9
2,657,685	+		Shew_2274	0.70	+2.1
2,657,685	+		Shew_2274	0.70	+0.2
2,657,685	+		Shew_2274	0.70	-0.7
2,657,685	+		Shew_2274	0.70	+1.1
2,657,685	+		Shew_2274	0.70	+0.9
2,657,685	+		Shew_2274	0.70	+1.2
2,657,685	+		Shew_2274	0.70	-0.7
2,657,685	+		Shew_2274	0.70	-0.7
2,657,693	-		Shew_2274	0.70	+1.0
2,657,693	-		Shew_2274	0.70	-0.6
2,657,693	-		Shew_2274	0.70	+3.3
2,657,693	-		Shew_2274	0.70	-0.6
2,657,751	-		Shew_2274	0.74	-1.8
2,657,767	-		Shew_2274	0.75	+0.4
2,657,796	-		Shew_2274	0.76	+0.4
2,657,815	+		Shew_2274	0.77	+0.1
2,657,816	-		Shew_2274	0.77	+0.8
2,657,816	+		Shew_2274	0.77	-0.6
2,657,824	-		Shew_2274	0.78	-0.8
2,657,824	-		Shew_2274	0.78	+2.6
2,657,848	-		Shew_2274	0.79	+2.3
2,657,848	+		Shew_2274	0.79	-0.7
2,657,848	-		Shew_2274	0.79	-0.4
2,657,848	+		Shew_2274	0.79	-1.3
2,657,848	+		Shew_2274	0.79	+0.3
2,657,856	-		Shew_2274	0.79	-1.7
2,657,856	-		Shew_2274	0.79	-0.7
2,657,895	+		Shew_2274	0.82	-0.0
2,657,903	+		Shew_2274	0.82	+0.1
2,657,910	-		Shew_2274	0.82	+0.1
2,657,911	-		Shew_2274	0.83	+1.6
2,657,914	+		Shew_2274	0.83	+1.3
2,657,914	+		Shew_2274	0.83	-0.1
2,657,914	+		Shew_2274	0.83	-3.9
2,657,914	+		Shew_2274	0.83	+1.1
2,657,914	+		Shew_2274	0.83	+1.0
2,657,914	+		Shew_2274	0.83	+0.4
2,657,914	+		Shew_2274	0.83	+0.8
2,657,914	+		Shew_2274	0.83	-1.7
2,657,922	+		Shew_2274	0.83	+0.1
2,657,922	-		Shew_2274	0.83	-1.3
2,657,922	-		Shew_2274	0.83	+0.6
2,657,930	-		Shew_2274	0.84	-1.1
2,657,930	-		Shew_2274	0.84	+0.8
2,657,932	+		Shew_2274	0.84	+0.1
2,657,932	+		Shew_2274	0.84	+0.1
2,657,984	+		Shew_2274	0.87	+0.3
2,657,984	+		Shew_2274	0.87	+1.2
2,657,984	+		Shew_2274	0.87	-0.6
2,657,984	+		Shew_2274	0.87	-0.2
2,657,984	+		Shew_2274	0.87	+0.5
2,657,989	+		Shew_2274	0.87	-0.4
2,657,992	-		Shew_2274	0.87	+0.3
2,657,992	-		Shew_2274	0.87	-0.1
2,657,992	-		Shew_2274	0.87	+0.6
2,658,002	-		Shew_2274	0.88	+0.3
2,658,002	-		Shew_2274	0.88	+0.8
2,658,004	+		Shew_2274	0.88	-0.2
2,658,004	+		Shew_2274	0.88	-2.0
2,658,004	+		Shew_2274	0.88	+0.3
2,658,004	+		Shew_2274	0.88	-2.7
2,658,013	+		Shew_2274	0.88	+0.9
2,658,026	+		Shew_2274	0.89	-0.1
2,658,027	+		Shew_2274	0.89	+0.2
2,658,027	+		Shew_2274	0.89	+0.5
2,658,027	+		Shew_2274	0.89	-1.2
2,658,027	+		Shew_2274	0.89	+0.9
2,658,027	+		Shew_2274	0.89	+0.0
2,658,027	+		Shew_2274	0.89	+1.3
2,658,032	+		Shew_2274	0.89	-1.9
2,658,033	+		Shew_2274	0.89	-2.9
2,658,033	+		Shew_2274	0.89	-0.1
2,658,033	+		Shew_2274	0.89	-1.1
2,658,034	-		Shew_2274	0.89	-0.5
2,658,034	-		Shew_2274	0.89	-1.8
2,658,034	-		Shew_2274	0.89	-1.9
2,658,034	+		Shew_2274	0.89	+1.1
2,658,035	-		Shew_2274	0.89	+0.3
2,658,035	-		Shew_2274	0.89	-1.5
2,658,035	-		Shew_2274	0.89	+2.3
2,658,035	-		Shew_2274	0.89	+1.0
2,658,041	-		Shew_2274	0.90	-3.6
2,658,046	-				+1.3
2,658,094	+				-0.6
2,658,197	+				-0.2
2,658,211	+				-0.4
2,658,242	+				-0.4
2,658,242	+				+1.0
2,658,242	+				-0.1
2,658,252	+				-2.1
2,658,252	+				-1.8
2,658,252	+				-0.3
2,658,252	+				-0.7
2,658,252	+				+0.5
2,658,252	+				-0.3
2,658,252	+				+0.6
2,658,260	-				-0.1
2,658,260	-				+0.3
2,658,260	-				-1.1
2,658,260	-				+1.7
2,658,260	-				-1.5
2,658,260	-				-0.2
2,658,260	-				-0.1
2,658,260	-				+0.9
2,658,268	+				-0.7
2,658,268	+				-0.1
2,658,268	+				-2.0
2,658,268	+				-0.1
2,658,272	-				-0.1
2,658,273	+				+0.0
2,658,276	-				+0.6
2,658,276	-				+0.2
2,658,279	+				+0.3
2,658,279	+				-0.6
2,658,279	+				-2.0
2,658,279	+				-0.1
2,658,279	+				+0.8
2,658,281	-				+0.0
2,658,287	+				-0.5
2,658,287	-				-0.3
2,658,287	-				-2.0
2,658,287	-				-0.2
2,658,288	+				+0.4
2,658,309	+				+0.9
2,658,328	-				+1.2
2,658,328	-				-0.0
2,658,352	+		Shew_2275	0.11	+0.1
2,658,352	-		Shew_2275	0.11	+0.0
2,658,357	+		Shew_2275	0.12	-0.3
2,658,357	+		Shew_2275	0.12	-0.1
2,658,357	+		Shew_2275	0.12	-0.1
2,658,357	+		Shew_2275	0.12	-0.8
2,658,365	-		Shew_2275	0.13	-0.3
2,658,365	-		Shew_2275	0.13	+0.6
2,658,370	-		Shew_2275	0.14	+0.7
2,658,370	-		Shew_2275	0.14	+0.1
2,658,370	-		Shew_2275	0.14	+0.0
2,658,370	-		Shew_2275	0.14	+0.6
2,658,403	+		Shew_2275	0.18	+0.0
2,658,406	-		Shew_2275	0.18	-0.4
2,658,504	+		Shew_2275	0.30	-0.1
2,658,667	+		Shew_2275	0.51	-0.4
2,658,752	+		Shew_2275	0.62	-1.2
2,658,809	+		Shew_2275	0.69	-1.2
2,658,809	+		Shew_2275	0.69	-0.1
2,659,078	+				-0.2
2,659,097	+				-0.0
2,659,105	-				-0.3
2,659,105	-				-0.2
2,659,105	-				-2.7
2,659,112	+				+0.0
2,659,286	+		Shew_2276	0.11	-1.5
2,659,364	-		Shew_2276	0.19	+0.5
2,659,432	-		Shew_2276	0.26	+0.0
2,659,489	+		Shew_2276	0.32	+0.5
2,659,497	-		Shew_2276	0.32	+1.2
2,659,497	-		Shew_2276	0.32	+0.7
2,659,497	-		Shew_2276	0.32	-1.8
2,659,737	-		Shew_2276	0.57	+0.8
2,659,942	+		Shew_2276	0.78	+0.0
2,659,970	+		Shew_2276	0.81	-0.4