Experiment: Chlorite 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt moaA and Shew_0088 are separated by 111 nucleotides Shew_0088 and moaC overlap by 8 nucleotides moaC and Shew_0090 are separated by 49 nucleotides Shew_0090 and Shew_0091 are separated by 1 nucleotides Shew_0091 and Shew_0092 are separated by 33 nucleotides
Shew_0087: moaA - molybdenum cofactor biosynthesis protein A (RefSeq), at 101,556 to 102,569
moaA
Shew_0088: Shew_0088 - molybdenum cofactor biosynthesis protein B (RefSeq), at 102,681 to 103,211
_0088
Shew_0089: moaC - molybdenum cofactor biosynthesis protein C (RefSeq), at 103,204 to 103,680
moaC
Shew_0090: Shew_0090 - molybdopterin converting factor, subunit 1 (RefSeq), at 103,730 to 103,981
_0090
Shew_0091: Shew_0091 - molybdopterin biosynthesis MoaE (RefSeq), at 103,983 to 104,450
_0091
Shew_0092: Shew_0092 - molybdenum ABC transporter, periplasmic molybdate-binding protein (RefSeq), at 104,484 to 105,308
_0092
Position (kb) 103
104 Strain fitness (log2 ratio) -7
-6
-5
-4
-3
-2
-1
0
1
2 at 102.445 kb on + strand, within moaA at 102.445 kb on + strand, within moaA at 102.445 kb on + strand, within moaA at 102.453 kb on - strand, within moaA at 102.453 kb on - strand, within moaA at 102.453 kb on - strand, within moaA at 102.453 kb on - strand, within moaA at 102.476 kb on + strand at 102.488 kb on + strand at 102.609 kb on + strand at 102.658 kb on + strand at 102.685 kb on - strand at 102.726 kb on + strand at 102.737 kb on + strand, within Shew_0088 at 102.753 kb on - strand, within Shew_0088 at 103.015 kb on + strand, within Shew_0088 at 103.023 kb on - strand, within Shew_0088 at 103.038 kb on + strand, within Shew_0088 at 103.143 kb on + strand, within Shew_0088 at 103.172 kb on - strand at 103.601 kb on - strand, within moaC at 104.069 kb on - strand, within Shew_0091 at 104.211 kb on + strand, within Shew_0091 at 104.219 kb on - strand, within Shew_0091 at 104.505 kb on + strand at 104.513 kb on - strand at 104.535 kb on + strand at 104.538 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 200 mM remove 102,445 + moaA Shew_0087 0.88 -3.1 102,445 + moaA Shew_0087 0.88 -3.4 102,445 + moaA Shew_0087 0.88 -1.1 102,453 - moaA Shew_0087 0.88 -4.6 102,453 - moaA Shew_0087 0.88 -5.1 102,453 - moaA Shew_0087 0.88 -4.1 102,453 - moaA Shew_0087 0.88 -5.5 102,476 + -3.4 102,488 + -3.0 102,609 + +1.2 102,658 + +1.0 102,685 - -2.8 102,726 + +2.1 102,737 + Shew_0088 0.11 -0.1 102,753 - Shew_0088 0.14 -2.5 103,015 + Shew_0088 0.63 +0.0 103,023 - Shew_0088 0.64 -3.8 103,038 + Shew_0088 0.67 +0.4 103,143 + Shew_0088 0.87 -0.7 103,172 - -4.2 103,601 - moaC Shew_0089 0.83 -2.6 104,069 - Shew_0091 0.18 -7.0 104,211 + Shew_0091 0.49 -5.3 104,219 - Shew_0091 0.50 -2.9 104,505 + -6.0 104,513 - -3.6 104,535 + -3.6 104,538 - -4.3
Or see this region's nucleotide sequence