Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5760

Experiment: Cephalothin 4 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 4 mg/ml
6,571,652	-		Pf6N2E2_5759	0.48	+0.8
6,571,652	-		Pf6N2E2_5759	0.48	-0.7
6,571,715	+		Pf6N2E2_5759	0.52	-0.3
6,571,778	+		Pf6N2E2_5759	0.56	-0.2
6,571,779	-		Pf6N2E2_5759	0.56	-0.8
6,571,832	+		Pf6N2E2_5759	0.60	-0.2
6,571,832	+		Pf6N2E2_5759	0.60	+0.8
6,571,833	-		Pf6N2E2_5759	0.60	-0.8
6,571,833	-		Pf6N2E2_5759	0.60	+1.9
6,571,841	+		Pf6N2E2_5759	0.60	+0.3
6,571,841	+		Pf6N2E2_5759	0.60	-0.4
6,571,841	+		Pf6N2E2_5759	0.60	+0.4
6,571,841	+		Pf6N2E2_5759	0.60	+0.2
6,571,841	+		Pf6N2E2_5759	0.60	-0.5
6,571,937	+		Pf6N2E2_5759	0.67	+0.1
6,571,938	-		Pf6N2E2_5759	0.67	+2.1
6,572,178	-		Pf6N2E2_5759	0.83	-0.0
6,572,178	-		Pf6N2E2_5759	0.83	+0.5
6,572,178	-		Pf6N2E2_5759	0.83	+0.8
6,572,249	+		Pf6N2E2_5759	0.88	-0.0
6,572,250	-		Pf6N2E2_5759	0.88	-1.0
6,572,415	+				-2.0
6,572,415	+				-1.0
6,572,441	+				+1.0
6,572,442	-				-0.5
6,572,583	+				-0.5
6,572,583	+				-1.2
6,572,583	+				-0.5
6,572,584	-				-1.0
6,572,584	-				-0.3
6,572,584	-				+0.8
6,572,647	-				-1.6
6,572,647	-				-1.1
6,572,954	+		Pf6N2E2_5760	0.11	-0.2
6,572,954	+		Pf6N2E2_5760	0.11	-0.2
6,572,955	-		Pf6N2E2_5760	0.11	+0.0
6,573,068	-		Pf6N2E2_5760	0.14	-0.5
6,573,068	-		Pf6N2E2_5760	0.14	-2.0
6,573,672	+		Pf6N2E2_5760	0.31	-0.4
6,573,672	+		Pf6N2E2_5760	0.31	-0.5
6,573,673	-		Pf6N2E2_5760	0.31	-0.9
6,573,901	+		Pf6N2E2_5760	0.38	-0.8
6,573,901	+		Pf6N2E2_5760	0.38	-0.4
6,573,902	-		Pf6N2E2_5760	0.38	-1.0
6,573,947	+		Pf6N2E2_5760	0.39	+0.1
6,573,947	+		Pf6N2E2_5760	0.39	+0.3
6,573,947	+		Pf6N2E2_5760	0.39	-1.6
6,573,947	+		Pf6N2E2_5760	0.39	-0.3
6,573,947	+		Pf6N2E2_5760	0.39	-2.2
6,573,948	-		Pf6N2E2_5760	0.39	-0.3
6,573,948	-		Pf6N2E2_5760	0.39	-0.2
6,573,948	-		Pf6N2E2_5760	0.39	-1.6
6,573,948	-		Pf6N2E2_5760	0.39	-1.1
6,573,990	+		Pf6N2E2_5760	0.41	-0.0
6,574,041	+		Pf6N2E2_5760	0.42	-0.8
6,574,042	-		Pf6N2E2_5760	0.42	-1.0
6,574,059	+		Pf6N2E2_5760	0.43	-1.3
6,574,265	+		Pf6N2E2_5760	0.48	-0.8
6,574,266	-		Pf6N2E2_5760	0.49	-0.5
6,574,592	-		Pf6N2E2_5760	0.58	+2.0
6,574,642	+		Pf6N2E2_5760	0.59	-1.0
6,574,643	-		Pf6N2E2_5760	0.59	-2.0
6,574,692	+		Pf6N2E2_5760	0.61	-0.3
6,574,692	+		Pf6N2E2_5760	0.61	-0.9
6,574,693	-		Pf6N2E2_5760	0.61	-1.2
6,574,693	-		Pf6N2E2_5760	0.61	-1.0
6,574,693	-		Pf6N2E2_5760	0.61	-1.5
6,574,759	-		Pf6N2E2_5760	0.63	-2.1
6,574,863	+		Pf6N2E2_5760	0.66	-1.4
6,574,863	+		Pf6N2E2_5760	0.66	-0.6
6,574,863	+		Pf6N2E2_5760	0.66	-0.3
6,574,864	-		Pf6N2E2_5760	0.66	-0.2
6,574,864	-		Pf6N2E2_5760	0.66	-1.0
6,575,124	-		Pf6N2E2_5760	0.73	-1.1
6,575,193	+		Pf6N2E2_5760	0.75	-2.1
6,575,193	+		Pf6N2E2_5760	0.75	-0.7
6,575,194	-		Pf6N2E2_5760	0.75	-1.5
6,575,205	-		Pf6N2E2_5760	0.76	-0.2
6,575,346	+		Pf6N2E2_5760	0.80	-1.2
6,575,347	-		Pf6N2E2_5760	0.80	-0.3
6,575,404	-		Pf6N2E2_5760	0.81	-1.6
6,575,412	+		Pf6N2E2_5760	0.82	-1.3
6,575,412	+		Pf6N2E2_5760	0.82	-2.0
6,575,412	+		Pf6N2E2_5760	0.82	-1.4
6,575,413	-		Pf6N2E2_5760	0.82	-1.0
6,575,413	-		Pf6N2E2_5760	0.82	-0.6
6,575,413	-		Pf6N2E2_5760	0.82	-1.9
6,575,528	+		Pf6N2E2_5760	0.85	-0.3
6,575,528	+		Pf6N2E2_5760	0.85	-0.9
6,575,529	-		Pf6N2E2_5760	0.85	+0.1
6,575,536	+		Pf6N2E2_5760	0.85	-0.0
6,575,537	-		Pf6N2E2_5760	0.85	-1.0
6,575,537	-		Pf6N2E2_5760	0.85	-0.8
6,575,661	+		Pf6N2E2_5760	0.89	-0.7
6,575,661	+		Pf6N2E2_5760	0.89	-1.0
6,575,661	+		Pf6N2E2_5760	0.89	-0.9
6,575,662	-		Pf6N2E2_5760	0.89	-1.6
6,575,811	-				-0.3
6,575,835	+				+0.1
6,575,835	+				-0.5
6,575,836	-				-0.5
6,575,836	-				-0.5
6,575,907	+				-0.0
6,575,907	+				-0.3
6,575,908	-				-0.2
6,575,908	-				-0.0
6,575,908	-				-0.8
6,575,908	-				-0.4
6,575,908	-				-0.0
6,575,928	+				+1.0
6,575,928	+				-0.9
6,575,928	+				-0.4
6,575,928	+				-0.6
6,575,928	+				-1.2
6,575,929	-				-1.5
6,575,929	-				-2.0
6,575,929	-				-0.5
6,575,980	-				-0.8
6,576,007	+				-0.9
6,576,007	+				-0.1
6,576,009	+				+1.5
6,576,009	+				-0.7
6,576,009	+				-0.0
6,576,009	+				-0.1
6,576,009	+				-2.3
6,576,009	+				-1.0
6,576,009	+				-1.2
6,576,009	+				-1.5
6,576,009	+				-0.6
6,576,009	+				-0.3
6,576,009	+				-0.2
6,576,009	+				-0.8
6,576,009	+				-1.6
6,576,010	-				-1.4
6,576,010	-				-0.9
6,576,010	-				+1.7
6,576,010	-				-1.1
6,576,252	+				-0.6
6,576,252	+				+0.8
6,576,253	-				+0.7
6,576,253	-				+0.5
6,576,253	-				-1.6
6,576,304	+				-0.2
6,576,562	+		Pf6N2E2_5761	0.48	+0.8
6,576,563	-		Pf6N2E2_5761	0.48	-1.6
6,576,685	+		Pf6N2E2_5761	0.71	-1.0
6,576,809	+				+0.3
6,576,810	-				-0.9
6,576,822	+				-0.4
6,576,926	+				+1.1
6,576,927	-				-0.9
6,576,980	+				-0.7
6,576,980	+				+2.0
6,576,981	-				+0.4
6,577,039	+				+0.3
6,577,039	+				-0.5
6,577,039	+				-1.4
6,577,039	+				+0.4
6,577,039	+				+0.6
6,577,040	-				+0.7
6,577,040	-				+0.0
6,577,040	-				+0.5
6,577,049	-				+0.7