Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2079

Experiment: Cephalothin 4 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 4 mg/ml
2,472,058	+		Pf6N2E2_2078	0.52	-0.8
2,472,059	-		Pf6N2E2_2078	0.52	-0.1
2,472,115	+		Pf6N2E2_2078	0.55	+0.3
2,472,115	+		Pf6N2E2_2078	0.55	+1.1
2,472,115	+		Pf6N2E2_2078	0.55	+0.9
2,472,115	+		Pf6N2E2_2078	0.55	-0.6
2,472,115	+		Pf6N2E2_2078	0.55	-0.1
2,472,116	-		Pf6N2E2_2078	0.55	+1.9
2,472,116	-		Pf6N2E2_2078	0.55	-0.5
2,472,116	-		Pf6N2E2_2078	0.55	+0.8
2,472,293	+		Pf6N2E2_2078	0.66	+0.5
2,472,293	+		Pf6N2E2_2078	0.66	+0.2
2,472,293	+		Pf6N2E2_2078	0.66	-0.2
2,472,293	+		Pf6N2E2_2078	0.66	-0.2
2,472,293	+		Pf6N2E2_2078	0.66	-1.5
2,472,293	+		Pf6N2E2_2078	0.66	-0.5
2,472,294	-		Pf6N2E2_2078	0.66	-0.1
2,472,294	-		Pf6N2E2_2078	0.66	-0.4
2,472,294	-		Pf6N2E2_2078	0.66	-1.5
2,472,294	-		Pf6N2E2_2078	0.66	-1.4
2,472,294	-		Pf6N2E2_2078	0.66	+1.1
2,472,294	-		Pf6N2E2_2078	0.66	-0.6
2,472,463	+		Pf6N2E2_2078	0.76	-0.4
2,472,463	+		Pf6N2E2_2078	0.76	+0.6
2,472,475	+		Pf6N2E2_2078	0.76	+0.5
2,472,484	+		Pf6N2E2_2078	0.77	+0.2
2,472,484	+		Pf6N2E2_2078	0.77	-0.2
2,472,484	+		Pf6N2E2_2078	0.77	-1.1
2,472,484	+		Pf6N2E2_2078	0.77	+1.2
2,472,484	+		Pf6N2E2_2078	0.77	+1.2
2,472,485	-		Pf6N2E2_2078	0.77	-0.2
2,472,485	-		Pf6N2E2_2078	0.77	+0.6
2,472,485	-		Pf6N2E2_2078	0.77	+0.5
2,472,664	+		Pf6N2E2_2078	0.87	-1.3
2,472,664	+		Pf6N2E2_2078	0.87	-0.2
2,472,665	-		Pf6N2E2_2078	0.87	+0.4
2,472,880	+				+0.9
2,472,913	+				+0.4
2,472,913	+				+0.8
2,472,913	+				+0.7
2,472,913	+				-0.8
2,472,914	-				-1.8
2,472,914	-				+1.1
2,472,914	-				+1.2
2,472,914	-				-0.2
2,472,914	-				+0.2
2,472,914	-				+0.1
2,472,914	-				+1.1
2,472,914	-				-0.4
2,472,914	-				+0.6
2,473,091	+		Pf6N2E2_2079	0.17	+1.3
2,473,381	+		Pf6N2E2_2079	0.50	+0.2
2,473,381	+		Pf6N2E2_2079	0.50	+0.9
2,473,382	-		Pf6N2E2_2079	0.50	+0.6
2,473,382	-				-1.8
2,473,382	-		Pf6N2E2_2079	0.50	+0.0
2,473,412	+		Pf6N2E2_2079	0.54	+2.1
2,473,413	-		Pf6N2E2_2079	0.54	+1.0
2,473,413	-		Pf6N2E2_2079	0.54	+0.2
2,473,413	-		Pf6N2E2_2079	0.54	+1.7
2,473,471	+		Pf6N2E2_2079	0.61	+0.4
2,473,472	-		Pf6N2E2_2079	0.61	+0.5
2,473,472	-		Pf6N2E2_2079	0.61	+1.4
2,473,477	+		Pf6N2E2_2079	0.61	-0.2
2,473,477	+		Pf6N2E2_2079	0.61	-0.0
2,473,478	-		Pf6N2E2_2079	0.62	+0.1
2,473,478	-		Pf6N2E2_2079	0.62	+0.3
2,473,478	-		Pf6N2E2_2079	0.62	-0.1
2,473,579	+		Pf6N2E2_2079	0.73	+0.7
2,473,579	+		Pf6N2E2_2079	0.73	+1.2
2,473,579	+		Pf6N2E2_2079	0.73	+0.3
2,473,579	+		Pf6N2E2_2079	0.73	-0.3
2,473,579	+		Pf6N2E2_2079	0.73	+1.8
2,473,580	-		Pf6N2E2_2079	0.73	+1.6
2,473,580	-		Pf6N2E2_2079	0.73	+1.3
2,473,580	-		Pf6N2E2_2079	0.73	+0.8
2,473,580	-		Pf6N2E2_2079	0.73	+0.9
2,473,607	-		Pf6N2E2_2079	0.77	-1.2
2,473,633	+		Pf6N2E2_2079	0.80	+0.7
2,473,633	+		Pf6N2E2_2079	0.80	+1.8
2,473,633	+		Pf6N2E2_2079	0.80	+0.3
2,473,634	-		Pf6N2E2_2079	0.80	-0.0
2,473,693	+		Pf6N2E2_2079	0.86	+0.5
2,473,693	+		Pf6N2E2_2079	0.86	+0.8
2,473,810	+				-0.6
2,473,810	+				-0.2
2,473,833	+				+0.8
2,473,834	-				+0.4
2,473,943	+				-0.2
2,473,943	+				-0.2
2,473,943	+				-1.1
2,473,943	+				+0.6
2,473,943	+				-1.1
2,474,126	-		Pf6N2E2_2080	0.56	+0.3
2,474,267	-				+1.2
2,474,267	-				+0.7
2,474,267	-				+0.4
2,474,267	-				-1.0
2,474,267	-				-1.1
2,474,349	-				+0.7
2,474,441	+				+0.3
2,474,441	+				-0.4
2,474,441	+				+1.0
2,474,441	+				+0.0
2,474,441	+				-0.2
2,474,441	+				+0.4
2,474,441	+				+0.1
2,474,441	+				+0.2
2,474,442	-				-1.5
2,474,442	-				+1.1
2,474,442	-				+0.4
2,474,442	-				+0.6
2,474,442	-				+1.0
2,474,442	-				+1.7
2,474,442	-				+1.5
2,474,445	+				+0.0
2,474,445	+				-0.2
2,474,445	+				+0.6
2,474,445	+				+0.6
2,474,445	+				+1.3
2,474,446	-				+0.8
2,474,446	-				-0.2
2,474,446	-				-0.3
2,474,446	-				-0.2
2,474,493	+				+0.4
2,474,494	-				-0.2
2,474,494	-				+0.4
2,474,494	-				+1.4
2,474,779	+		Pf6N2E2_2081	0.64	+0.8
2,474,780	-		Pf6N2E2_2081	0.64	-0.2
2,474,780	-		Pf6N2E2_2081	0.64	-0.1