Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS08750

Experiment: succinate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C)
1,943,431	+		PFLU_RS08745	0.21	+0.5
1,943,699	-		PFLU_RS08745	0.47	+0.2
1,943,701	+		PFLU_RS08745	0.48	-0.4
1,943,701	+		PFLU_RS08745	0.48	+0.4
1,943,701	+		PFLU_RS08745	0.48	-0.5
1,943,701	+		PFLU_RS08745	0.48	-1.2
1,943,701	+		PFLU_RS08745	0.48	-0.4
1,943,702	-		PFLU_RS08745	0.48	-0.6
1,943,702	-		PFLU_RS08745	0.48	+1.8
1,943,702	-		PFLU_RS08745	0.48	-1.2
1,943,702	-		PFLU_RS08745	0.48	-0.6
1,943,702	-		PFLU_RS08745	0.48	-1.3
1,943,702	-		PFLU_RS08745	0.48	-0.4
1,943,702	-		PFLU_RS08745	0.48	-0.6
1,943,702	-		PFLU_RS08745	0.48	-1.0
1,943,702	-		PFLU_RS08745	0.48	+0.4
1,943,702	-		PFLU_RS08745	0.48	-0.9
1,943,702	-		PFLU_RS08745	0.48	-1.2
1,943,702	-		PFLU_RS08745	0.48	-0.6
1,943,702	-		PFLU_RS08745	0.48	-1.2
1,943,702	-		PFLU_RS08745	0.48	+0.2
1,943,977	+		PFLU_RS08745	0.75	+3.4
1,943,977	+		PFLU_RS08745	0.75	-3.4
1,943,977	+		PFLU_RS08745	0.75	-1.2
1,943,977	+		PFLU_RS08745	0.75	+1.4
1,943,977	+		PFLU_RS08745	0.75	-0.3
1,943,977	+		PFLU_RS08745	0.75	+0.8
1,943,978	-		PFLU_RS08745	0.75	+0.1
1,943,978	-		PFLU_RS08745	0.75	+0.5
1,943,978	-		PFLU_RS08745	0.75	-1.5
1,943,978	-		PFLU_RS08745	0.75	-0.6
1,943,978	-		PFLU_RS08745	0.75	+0.6
1,943,978	-		PFLU_RS08745	0.75	+1.5
1,943,978	-		PFLU_RS08745	0.75	-2.5
1,943,978	-		PFLU_RS08745	0.75	+0.8
1,943,978	-		PFLU_RS08745	0.75	-0.1
1,944,223	+				+0.7
1,944,238	+				-0.3
1,944,238	+				-1.6
1,944,238	+				-0.5
1,944,239	-				-1.6
1,944,239	-				+0.5
1,944,239	-				-2.3
1,944,374	+				-0.2
1,944,374	+				-0.5
1,944,374	+				-3.2
1,944,374	+				+0.9
1,944,374	+				-1.3
1,944,374	+				+1.2
1,944,374	+				+1.1
1,944,375	-				-0.7
1,944,375	-				-0.6
1,944,375	-				+0.2
1,944,375	-				+0.5
1,944,375	-				-2.5
1,944,375	-				+2.6
1,944,375	-				+0.9
1,944,375	-				-0.1
1,944,402	+				-1.0
1,944,402	+				-1.2
1,944,402	+				+0.1
1,944,402	+				-1.3
1,944,402	+				+2.7
1,944,402	+				-0.6
1,944,402	+				-1.2
1,944,403	-				+1.9
1,944,403	-				-2.2
1,944,403	-				+0.5
1,944,403	-				-0.1
1,944,445	+				-0.8
1,944,446	-				+0.4
1,944,592	+		PFLU_RS08750	0.25	-0.2
1,944,593	-		PFLU_RS08750	0.25	+1.5
1,944,593	-		PFLU_RS08750	0.25	-1.0
1,944,593	-		PFLU_RS08750	0.25	-0.8
1,944,617	+		PFLU_RS08750	0.28	+1.5
1,944,618	-		PFLU_RS08750	0.28	-1.5
1,944,618	-		PFLU_RS08750	0.28	-1.0
1,944,812	+		PFLU_RS08750	0.53	-1.2
1,944,812	+		PFLU_RS08750	0.53	-0.5
1,944,812	+		PFLU_RS08750	0.53	-0.5
1,944,812	+		PFLU_RS08750	0.53	+0.2
1,944,812	+		PFLU_RS08750	0.53	-1.2
1,944,812	+		PFLU_RS08750	0.53	-0.1
1,944,812	+		PFLU_RS08750	0.53	-2.0
1,944,812	+		PFLU_RS08750	0.53	+0.4
1,944,812	+		PFLU_RS08750	0.53	-0.2
1,944,812	+		PFLU_RS08750	0.53	-1.2
1,944,813	-		PFLU_RS08750	0.53	+0.3
1,944,813	-		PFLU_RS08750	0.53	+0.2
1,944,813	-		PFLU_RS08750	0.53	+0.2
1,944,813	-		PFLU_RS08750	0.53	+0.5
1,944,813	-		PFLU_RS08750	0.53	-2.1
1,944,902	+		PFLU_RS08750	0.64	-0.3
1,944,902	+		PFLU_RS08750	0.64	+1.4
1,944,902	+		PFLU_RS08750	0.64	-0.9
1,944,902	+		PFLU_RS08750	0.64	-0.6
1,944,902	+		PFLU_RS08750	0.64	-1.2
1,944,902	+		PFLU_RS08750	0.64	-0.5
1,944,902	+		PFLU_RS08750	0.64	-0.5
1,944,903	-		PFLU_RS08750	0.65	-1.9
1,944,903	-		PFLU_RS08750	0.65	+1.4
1,944,903	-		PFLU_RS08750	0.65	-1.0
1,944,903	-		PFLU_RS08750	0.65	-0.7
1,944,903	-		PFLU_RS08750	0.65	-0.6
1,944,903	-		PFLU_RS08750	0.65	-0.6
1,944,903	-		PFLU_RS08750	0.65	+0.3
1,944,903	-		PFLU_RS08750	0.65	+0.3
1,944,940	+		PFLU_RS08750	0.69	-0.3
1,944,940	+		PFLU_RS08750	0.69	+0.8
1,944,979	+		PFLU_RS08750	0.74	-2.1
1,944,979	+		PFLU_RS08750	0.74	-1.5
1,944,979	+		PFLU_RS08750	0.74	-0.0
1,944,979	+		PFLU_RS08750	0.74	+0.9
1,944,980	-		PFLU_RS08750	0.74	+1.4
1,944,980	-		PFLU_RS08750	0.74	+0.5
1,944,988	+		PFLU_RS08750	0.75	-0.3
1,945,091	+		PFLU_RS08750	0.89	+1.4
1,945,091	+		PFLU_RS08750	0.89	-0.6
1,945,092	-		PFLU_RS08750	0.89	-1.7
1,945,228	-				+1.1
1,945,228	-				-1.3
1,945,246	+				+0.7
1,945,247	-				+2.4
1,945,288	+				+1.7
1,945,288	+				+1.2
1,945,288	+				-1.5
1,945,289	-				+0.7
1,945,289	-				-1.5
1,945,289	-				+0.2
1,945,289	-				+0.2
1,945,401	-		PFLU_RS08755	0.23	+0.9
1,945,401	-		PFLU_RS08755	0.23	+0.4
1,945,447	+		PFLU_RS08755	0.30	+0.7
1,945,448	-		PFLU_RS08755	0.30	-0.1
1,945,471	+		PFLU_RS08755	0.34	+0.1
1,945,471	+		PFLU_RS08755	0.34	-0.8
1,945,471	+		PFLU_RS08755	0.34	+0.2
1,945,471	+		PFLU_RS08755	0.34	+0.5
1,945,472	-		PFLU_RS08755	0.34	-0.6
1,945,472	-		PFLU_RS08755	0.34	+0.2
1,945,472	-		PFLU_RS08755	0.34	+1.7
1,945,537	+		PFLU_RS08755	0.43	-0.3
1,945,565	+		PFLU_RS08755	0.47	-0.8
1,945,565	+		PFLU_RS08755	0.47	-1.2
1,945,565	+		PFLU_RS08755	0.47	-2.2
1,945,565	+		PFLU_RS08755	0.47	+0.7
1,945,565	+		PFLU_RS08755	0.47	-0.2
1,945,565	+		PFLU_RS08755	0.47	-1.8
1,945,565	+		PFLU_RS08755	0.47	-1.1
1,945,565	+		PFLU_RS08755	0.47	-1.6
1,945,565	+		PFLU_RS08755	0.47	+0.7
1,945,566	-		PFLU_RS08755	0.48	-1.2
1,945,566	-		PFLU_RS08755	0.48	-1.1
1,945,566	-		PFLU_RS08755	0.48	-0.4
1,945,566	-		PFLU_RS08755	0.48	+0.9
1,945,566	-		PFLU_RS08755	0.48	-1.1
1,945,566	-		PFLU_RS08755	0.48	-1.8
1,945,684	+		PFLU_RS08755	0.65	+1.0
1,945,684	+		PFLU_RS08755	0.65	-0.8
1,945,684	+		PFLU_RS08755	0.65	+0.8
1,945,709	-		PFLU_RS08755	0.69	+0.8
1,945,709	-		PFLU_RS08755	0.69	-0.6
1,945,709	-		PFLU_RS08755	0.69	-1.8
1,945,826	+		PFLU_RS08755	0.86	-0.2
1,945,826	+		PFLU_RS08755	0.86	+0.4
1,945,826	+		PFLU_RS08755	0.86	-0.2
1,945,827	-		PFLU_RS08755	0.86	-2.1
1,945,903	+				+0.4
1,945,904	-				+1.7
1,946,028	+		PFLU_RS08760	0.22	-1.6
1,946,029	-		PFLU_RS08760	0.22	-2.2
1,946,169	+		PFLU_RS08760	0.54	-0.6
1,946,169	+		PFLU_RS08760	0.54	-2.1
1,946,169	+		PFLU_RS08760	0.54	+0.6
1,946,169	+		PFLU_RS08760	0.54	-1.5
1,946,170	-		PFLU_RS08760	0.54	-1.5
1,946,170	-		PFLU_RS08760	0.54	-0.6