Experiment: Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05206 and H281DRAFT_05207 are separated by 22 nucleotides H281DRAFT_05207 and H281DRAFT_05208 are separated by 159 nucleotides
H281DRAFT_05206: H281DRAFT_05206 - chloride channel protein, CIC family, at 167,506 to 169,329
_05206
H281DRAFT_05207: H281DRAFT_05207 - glutathione S-transferase, at 169,352 to 170,089
_05207
H281DRAFT_05208: H281DRAFT_05208 - conserved hypothetical integral membrane protein, at 170,249 to 171,337
_05208
Position (kb) 169
170
171 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 168.601 kb on - strand, within H281DRAFT_05206 at 168.603 kb on + strand, within H281DRAFT_05206 at 168.604 kb on - strand, within H281DRAFT_05206 at 168.604 kb on - strand, within H281DRAFT_05206 at 168.704 kb on + strand, within H281DRAFT_05206 at 168.714 kb on + strand, within H281DRAFT_05206 at 168.715 kb on - strand, within H281DRAFT_05206 at 168.935 kb on + strand, within H281DRAFT_05206 at 168.936 kb on - strand, within H281DRAFT_05206 at 169.405 kb on + strand at 169.530 kb on + strand, within H281DRAFT_05207 at 169.531 kb on - strand, within H281DRAFT_05207 at 169.600 kb on + strand, within H281DRAFT_05207 at 169.639 kb on - strand, within H281DRAFT_05207 at 169.714 kb on - strand, within H281DRAFT_05207 at 169.717 kb on - strand, within H281DRAFT_05207 at 169.717 kb on - strand, within H281DRAFT_05207 at 169.800 kb on + strand, within H281DRAFT_05207 at 169.800 kb on + strand, within H281DRAFT_05207 at 169.801 kb on - strand, within H281DRAFT_05207 at 169.848 kb on + strand, within H281DRAFT_05207 at 169.848 kb on + strand, within H281DRAFT_05207 at 169.848 kb on + strand, within H281DRAFT_05207 at 169.849 kb on - strand, within H281DRAFT_05207 at 169.849 kb on - strand, within H281DRAFT_05207 at 169.849 kb on - strand, within H281DRAFT_05207 at 169.849 kb on - strand, within H281DRAFT_05207 at 170.005 kb on - strand, within H281DRAFT_05207 at 170.005 kb on - strand, within H281DRAFT_05207 at 170.071 kb on - strand at 170.074 kb on - strand at 170.250 kb on + strand at 170.306 kb on + strand at 170.306 kb on + strand at 170.307 kb on - strand at 170.307 kb on - strand at 170.310 kb on + strand at 170.311 kb on - strand at 170.435 kb on - strand, within H281DRAFT_05208 at 170.548 kb on + strand, within H281DRAFT_05208 at 170.548 kb on + strand, within H281DRAFT_05208 at 170.656 kb on + strand, within H281DRAFT_05208 at 170.657 kb on - strand, within H281DRAFT_05208
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM remove 168,601 - H281DRAFT_05206 0.60 -0.7 168,603 + H281DRAFT_05206 0.60 -0.1 168,604 - H281DRAFT_05206 0.60 +0.1 168,604 - H281DRAFT_05206 0.60 -3.4 168,704 + H281DRAFT_05206 0.66 -0.0 168,714 + H281DRAFT_05206 0.66 -0.6 168,715 - H281DRAFT_05206 0.66 +0.2 168,935 + H281DRAFT_05206 0.78 +0.2 168,936 - H281DRAFT_05206 0.78 +1.9 169,405 + +0.5 169,530 + H281DRAFT_05207 0.24 -0.1 169,531 - H281DRAFT_05207 0.24 +0.0 169,600 + H281DRAFT_05207 0.34 +0.1 169,639 - H281DRAFT_05207 0.39 +0.8 169,714 - H281DRAFT_05207 0.49 +0.1 169,717 - H281DRAFT_05207 0.49 +0.5 169,717 - H281DRAFT_05207 0.49 +0.6 169,800 + H281DRAFT_05207 0.61 +0.1 169,800 + H281DRAFT_05207 0.61 -0.0 169,801 - H281DRAFT_05207 0.61 -0.5 169,848 + H281DRAFT_05207 0.67 -2.2 169,848 + H281DRAFT_05207 0.67 +1.1 169,848 + H281DRAFT_05207 0.67 -0.3 169,849 - H281DRAFT_05207 0.67 +0.2 169,849 - H281DRAFT_05207 0.67 -0.4 169,849 - H281DRAFT_05207 0.67 +0.8 169,849 - H281DRAFT_05207 0.67 +0.7 170,005 - H281DRAFT_05207 0.88 +0.1 170,005 - H281DRAFT_05207 0.88 +0.6 170,071 - +0.8 170,074 - +1.2 170,250 + +1.1 170,306 + +0.2 170,306 + +0.5 170,307 - -0.1 170,307 - +0.2 170,310 + +1.1 170,311 - +0.4 170,435 - H281DRAFT_05208 0.17 -0.4 170,548 + H281DRAFT_05208 0.27 +0.4 170,548 + H281DRAFT_05208 0.27 +1.2 170,656 + H281DRAFT_05208 0.37 +1.0 170,657 - H281DRAFT_05208 0.37 +0.4
Or see this region's nucleotide sequence