Experiment: Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04246 and H281DRAFT_04247 are separated by 224 nucleotides H281DRAFT_04247 and H281DRAFT_04248 are separated by 19 nucleotides
H281DRAFT_04246: H281DRAFT_04246 - glutathione S-transferase, at 365,189 to 365,803
_04246
H281DRAFT_04247: H281DRAFT_04247 - aminopeptidase P Metallo peptidase. MEROPS family M24B, at 366,028 to 367,419
_04247
H281DRAFT_04248: H281DRAFT_04248 - 2-octaprenyl-6-methoxyphenol hydroxylase, at 367,439 to 368,809
_04248
Position (kb) 366
367
368 Strain fitness (log2 ratio) -2
-1
0
1 at 365.109 kb on + strand at 365.159 kb on - strand at 365.207 kb on - strand at 365.207 kb on - strand at 365.207 kb on - strand at 365.213 kb on - strand at 365.213 kb on - strand at 365.343 kb on + strand, within H281DRAFT_04246 at 365.344 kb on - strand, within H281DRAFT_04246 at 365.596 kb on - strand, within H281DRAFT_04246 at 365.725 kb on - strand, within H281DRAFT_04246 at 365.836 kb on + strand at 365.836 kb on + strand at 365.837 kb on - strand at 366.016 kb on + strand at 366.193 kb on + strand, within H281DRAFT_04247 at 366.193 kb on + strand, within H281DRAFT_04247 at 366.193 kb on + strand, within H281DRAFT_04247 at 366.193 kb on + strand, within H281DRAFT_04247 at 366.199 kb on + strand, within H281DRAFT_04247 at 366.199 kb on + strand, within H281DRAFT_04247 at 366.199 kb on + strand, within H281DRAFT_04247 at 366.199 kb on + strand, within H281DRAFT_04247 at 366.200 kb on - strand, within H281DRAFT_04247 at 366.200 kb on - strand, within H281DRAFT_04247 at 366.202 kb on + strand, within H281DRAFT_04247 at 366.680 kb on - strand, within H281DRAFT_04247 at 366.739 kb on + strand, within H281DRAFT_04247 at 366.739 kb on + strand, within H281DRAFT_04247 at 366.740 kb on - strand, within H281DRAFT_04247 at 366.740 kb on - strand, within H281DRAFT_04247 at 366.741 kb on + strand, within H281DRAFT_04247 at 366.741 kb on + strand, within H281DRAFT_04247 at 366.741 kb on + strand, within H281DRAFT_04247 at 367.108 kb on + strand, within H281DRAFT_04247 at 367.108 kb on + strand, within H281DRAFT_04247 at 367.108 kb on + strand, within H281DRAFT_04247 at 367.108 kb on + strand, within H281DRAFT_04247 at 367.109 kb on - strand, within H281DRAFT_04247 at 367.110 kb on + strand, within H281DRAFT_04247 at 367.110 kb on + strand, within H281DRAFT_04247 at 367.111 kb on - strand, within H281DRAFT_04247 at 367.111 kb on - strand, within H281DRAFT_04247 at 367.255 kb on + strand, within H281DRAFT_04247 at 367.255 kb on + strand, within H281DRAFT_04247 at 367.255 kb on + strand, within H281DRAFT_04247 at 367.255 kb on + strand, within H281DRAFT_04247 at 367.255 kb on + strand, within H281DRAFT_04247 at 367.255 kb on + strand, within H281DRAFT_04247 at 367.255 kb on + strand, within H281DRAFT_04247 at 367.256 kb on - strand, within H281DRAFT_04247 at 367.256 kb on - strand, within H281DRAFT_04247 at 367.256 kb on - strand, within H281DRAFT_04247
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM remove 365,109 + -1.3 365,159 - -0.4 365,207 - -0.2 365,207 - +0.5 365,207 - +0.1 365,213 - +0.3 365,213 - -1.4 365,343 + H281DRAFT_04246 0.25 -0.4 365,344 - H281DRAFT_04246 0.25 -0.4 365,596 - H281DRAFT_04246 0.66 +1.2 365,725 - H281DRAFT_04246 0.87 -0.1 365,836 + +0.4 365,836 + -2.0 365,837 - -0.0 366,016 + -1.2 366,193 + H281DRAFT_04247 0.12 -0.2 366,193 + H281DRAFT_04247 0.12 -0.3 366,193 + H281DRAFT_04247 0.12 -1.4 366,193 + H281DRAFT_04247 0.12 +0.2 366,199 + H281DRAFT_04247 0.12 -1.1 366,199 + H281DRAFT_04247 0.12 -0.5 366,199 + H281DRAFT_04247 0.12 +1.3 366,199 + H281DRAFT_04247 0.12 -0.4 366,200 - H281DRAFT_04247 0.12 -0.4 366,200 - H281DRAFT_04247 0.12 -0.2 366,202 + H281DRAFT_04247 0.12 -1.2 366,680 - H281DRAFT_04247 0.47 -0.3 366,739 + H281DRAFT_04247 0.51 -0.8 366,739 + H281DRAFT_04247 0.51 -0.6 366,740 - H281DRAFT_04247 0.51 -2.1 366,740 - H281DRAFT_04247 0.51 -1.0 366,741 + H281DRAFT_04247 0.51 +0.0 366,741 + H281DRAFT_04247 0.51 +0.6 366,741 + H281DRAFT_04247 0.51 -1.9 367,108 + H281DRAFT_04247 0.78 -0.4 367,108 + H281DRAFT_04247 0.78 +0.5 367,108 + H281DRAFT_04247 0.78 -0.1 367,108 + H281DRAFT_04247 0.78 +0.0 367,109 - H281DRAFT_04247 0.78 -0.8 367,110 + H281DRAFT_04247 0.78 -1.0 367,110 + H281DRAFT_04247 0.78 +0.3 367,111 - H281DRAFT_04247 0.78 +0.1 367,111 - H281DRAFT_04247 0.78 -1.2 367,255 + H281DRAFT_04247 0.88 -0.1 367,255 + H281DRAFT_04247 0.88 -0.1 367,255 + H281DRAFT_04247 0.88 -0.1 367,255 + H281DRAFT_04247 0.88 -0.1 367,255 + H281DRAFT_04247 0.88 -0.0 367,255 + H281DRAFT_04247 0.88 -0.9 367,255 + H281DRAFT_04247 0.88 -0.4 367,256 - H281DRAFT_04247 0.88 -0.4 367,256 - H281DRAFT_04247 0.88 -0.2 367,256 - H281DRAFT_04247 0.88 +1.1
Or see this region's nucleotide sequence