Experiment: Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04193 and H281DRAFT_04194 are separated by 90 nucleotides H281DRAFT_04194 and H281DRAFT_04195 are separated by 329 nucleotides
H281DRAFT_04193: H281DRAFT_04193 - branched chain amino acid aminotransferase apoenzyme, at 312,760 to 313,683
_04193
H281DRAFT_04194: H281DRAFT_04194 - Uncharacterized conserved protein, contains Zn-finger domain, at 313,774 to 313,968
_04194
H281DRAFT_04195: H281DRAFT_04195 - heptosyltransferase-2, at 314,298 to 315,323
_04195
Position (kb) 313
314 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 313.150 kb on + strand, within H281DRAFT_04193 at 313.300 kb on + strand, within H281DRAFT_04193 at 313.333 kb on + strand, within H281DRAFT_04193 at 313.333 kb on + strand, within H281DRAFT_04193 at 313.387 kb on + strand at 313.501 kb on + strand, within H281DRAFT_04193 at 313.501 kb on + strand, within H281DRAFT_04193 at 313.501 kb on + strand, within H281DRAFT_04193 at 313.501 kb on + strand, within H281DRAFT_04193 at 313.501 kb on + strand, within H281DRAFT_04193 at 313.501 kb on + strand, within H281DRAFT_04193 at 313.501 kb on + strand, within H281DRAFT_04193 at 313.501 kb on + strand, within H281DRAFT_04193 at 313.503 kb on + strand, within H281DRAFT_04193 at 313.657 kb on + strand at 313.657 kb on + strand at 313.681 kb on + strand at 313.682 kb on - strand at 313.757 kb on + strand at 313.758 kb on - strand at 313.930 kb on + strand, within H281DRAFT_04194 at 314.001 kb on + strand at 314.002 kb on - strand at 314.002 kb on - strand at 314.187 kb on + strand at 314.187 kb on + strand at 314.233 kb on + strand at 314.721 kb on + strand, within H281DRAFT_04195 at 314.721 kb on + strand, within H281DRAFT_04195 at 314.722 kb on - strand, within H281DRAFT_04195 at 314.860 kb on - strand, within H281DRAFT_04195
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM remove 313,150 + H281DRAFT_04193 0.42 -1.0 313,300 + H281DRAFT_04193 0.58 +0.8 313,333 + H281DRAFT_04193 0.62 +1.0 313,333 + H281DRAFT_04193 0.62 +0.3 313,387 + +1.9 313,501 + H281DRAFT_04193 0.80 +0.3 313,501 + H281DRAFT_04193 0.80 +0.3 313,501 + H281DRAFT_04193 0.80 -0.6 313,501 + H281DRAFT_04193 0.80 +0.6 313,501 + H281DRAFT_04193 0.80 -0.6 313,501 + H281DRAFT_04193 0.80 +0.9 313,501 + H281DRAFT_04193 0.80 +0.6 313,501 + H281DRAFT_04193 0.80 +0.4 313,503 + H281DRAFT_04193 0.80 -0.6 313,657 + -0.6 313,657 + -1.6 313,681 + +0.2 313,682 - +1.7 313,757 + -0.8 313,758 - +0.9 313,930 + H281DRAFT_04194 0.80 -1.1 314,001 + -0.5 314,002 - -1.3 314,002 - -0.1 314,187 + +0.0 314,187 + +1.6 314,233 + -0.3 314,721 + H281DRAFT_04195 0.41 +0.4 314,721 + H281DRAFT_04195 0.41 -3.7 314,722 - H281DRAFT_04195 0.41 -0.1 314,860 - H281DRAFT_04195 0.55 -1.7
Or see this region's nucleotide sequence