Experiment: Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02784 and H281DRAFT_02785 are separated by 52 nucleotides H281DRAFT_02785 and H281DRAFT_02786 are separated by 262 nucleotides H281DRAFT_02786 and H281DRAFT_02787 overlap by 41 nucleotides
H281DRAFT_02784: H281DRAFT_02784 - Uncharacterized conserved protein YecE, DUF72 family, at 374,088 to 375,008
_02784
H281DRAFT_02785: H281DRAFT_02785 - DNA polymerase, at 375,061 to 375,723
_02785
H281DRAFT_02786: H281DRAFT_02786 - hypothetical protein, at 375,986 to 376,156
_02786
H281DRAFT_02787: H281DRAFT_02787 - Acetyltransferase involved in cellulose biosynthesis, CelD/BcsL family, at 376,116 to 377,270
_02787
Position (kb) 375
376 Strain fitness (log2 ratio) -2
-1
0
1
2 at 374.137 kb on - strand at 374.138 kb on + strand at 374.161 kb on - strand at 374.161 kb on - strand at 374.731 kb on - strand, within H281DRAFT_02784 at 374.899 kb on - strand, within H281DRAFT_02784 at 374.904 kb on + strand, within H281DRAFT_02784 at 375.173 kb on + strand, within H281DRAFT_02785 at 375.174 kb on - strand, within H281DRAFT_02785 at 375.744 kb on + strand at 375.744 kb on + strand at 375.745 kb on - strand at 375.931 kb on - strand at 375.997 kb on + strand at 375.998 kb on - strand at 376.001 kb on + strand at 376.001 kb on + strand at 376.002 kb on - strand at 376.155 kb on - strand at 376.288 kb on + strand, within H281DRAFT_02787 at 376.396 kb on + strand, within H281DRAFT_02787 at 376.604 kb on + strand, within H281DRAFT_02787 at 376.605 kb on - strand, within H281DRAFT_02787
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM remove 374,137 - +0.0 374,138 + +0.6 374,161 - +0.4 374,161 - -0.2 374,731 - H281DRAFT_02784 0.70 -0.1 374,899 - H281DRAFT_02784 0.88 -1.3 374,904 + H281DRAFT_02784 0.89 +1.1 375,173 + H281DRAFT_02785 0.17 -0.3 375,174 - H281DRAFT_02785 0.17 -0.5 375,744 + +0.3 375,744 + +0.5 375,745 - -0.9 375,931 - +0.3 375,997 + +2.2 375,998 - +0.1 376,001 + -1.1 376,001 + -2.2 376,002 - +0.7 376,155 - +0.2 376,288 + H281DRAFT_02787 0.15 +1.2 376,396 + H281DRAFT_02787 0.24 -0.4 376,604 + H281DRAFT_02787 0.42 -0.9 376,605 - H281DRAFT_02787 0.42 +1.3
Or see this region's nucleotide sequence