Experiment: Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02746 and H281DRAFT_02747 are separated by 312 nucleotides H281DRAFT_02747 and H281DRAFT_02748 are separated by 86 nucleotides H281DRAFT_02748 and H281DRAFT_02749 are separated by 929 nucleotides
H281DRAFT_02746: H281DRAFT_02746 - Nicotinamidase-related amidase, at 330,660 to 331,340
_02746
H281DRAFT_02747: H281DRAFT_02747 - hypothetical protein, at 331,653 to 332,063
_02747
H281DRAFT_02748: H281DRAFT_02748 - Head domain of trimeric autotransporter adhesin, at 332,150 to 336,334
_02748
H281DRAFT_02749: H281DRAFT_02749 - undecaprenyl-diphosphatase, at 337,264 to 337,953
_02749
Position (kb) 332
333
334
335
336
337 Strain fitness (log2 ratio) -1
0
1
2
3 at 331.505 kb on + strand at 331.837 kb on - strand, within H281DRAFT_02747 at 332.030 kb on + strand at 332.076 kb on + strand at 332.084 kb on - strand at 332.427 kb on + strand at 332.570 kb on - strand, within H281DRAFT_02748 at 332.956 kb on - strand, within H281DRAFT_02748 at 333.358 kb on - strand, within H281DRAFT_02748 at 333.358 kb on - strand, within H281DRAFT_02748 at 333.358 kb on - strand, within H281DRAFT_02748 at 333.358 kb on - strand, within H281DRAFT_02748 at 333.463 kb on - strand, within H281DRAFT_02748 at 333.463 kb on - strand at 333.768 kb on + strand, within H281DRAFT_02748 at 333.768 kb on + strand, within H281DRAFT_02748 at 333.769 kb on - strand, within H281DRAFT_02748 at 333.804 kb on + strand, within H281DRAFT_02748 at 333.805 kb on - strand, within H281DRAFT_02748 at 333.805 kb on - strand, within H281DRAFT_02748 at 333.807 kb on + strand, within H281DRAFT_02748 at 333.867 kb on + strand, within H281DRAFT_02748 at 333.868 kb on - strand, within H281DRAFT_02748 at 333.999 kb on + strand, within H281DRAFT_02748 at 334.000 kb on - strand, within H281DRAFT_02748 at 334.188 kb on + strand, within H281DRAFT_02748 at 334.288 kb on - strand, within H281DRAFT_02748 at 334.419 kb on + strand, within H281DRAFT_02748 at 334.419 kb on + strand, within H281DRAFT_02748 at 334.830 kb on - strand, within H281DRAFT_02748 at 335.477 kb on - strand, within H281DRAFT_02748 at 335.478 kb on + strand, within H281DRAFT_02748 at 335.479 kb on - strand, within H281DRAFT_02748 at 335.479 kb on - strand, within H281DRAFT_02748 at 335.479 kb on - strand, within H281DRAFT_02748 at 335.539 kb on - strand, within H281DRAFT_02748 at 335.670 kb on - strand, within H281DRAFT_02748 at 335.670 kb on - strand, within H281DRAFT_02748 at 335.932 kb on - strand at 335.964 kb on + strand at 336.084 kb on + strand at 336.084 kb on + strand at 336.911 kb on + strand at 337.040 kb on + strand at 337.041 kb on - strand at 337.059 kb on - strand at 337.080 kb on + strand at 337.081 kb on - strand at 337.239 kb on - strand at 337.325 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM remove 331,505 + -0.4 331,837 - H281DRAFT_02747 0.45 -0.5 332,030 + -0.7 332,076 + +1.0 332,084 - +0.8 332,427 + -0.7 332,570 - H281DRAFT_02748 0.10 -0.9 332,956 - H281DRAFT_02748 0.19 -0.1 333,358 - H281DRAFT_02748 0.29 +0.1 333,358 - H281DRAFT_02748 0.29 -0.3 333,358 - H281DRAFT_02748 0.29 +1.3 333,358 - H281DRAFT_02748 0.29 +1.1 333,463 - H281DRAFT_02748 0.31 -0.7 333,463 - +1.1 333,768 + H281DRAFT_02748 0.39 -0.3 333,768 + H281DRAFT_02748 0.39 +0.4 333,769 - H281DRAFT_02748 0.39 +2.8 333,804 + H281DRAFT_02748 0.40 +0.2 333,805 - H281DRAFT_02748 0.40 +0.6 333,805 - H281DRAFT_02748 0.40 +0.6 333,807 + H281DRAFT_02748 0.40 +0.2 333,867 + H281DRAFT_02748 0.41 +0.2 333,868 - H281DRAFT_02748 0.41 -0.5 333,999 + H281DRAFT_02748 0.44 +0.2 334,000 - H281DRAFT_02748 0.44 +1.2 334,188 + H281DRAFT_02748 0.49 +0.9 334,288 - H281DRAFT_02748 0.51 +0.0 334,419 + H281DRAFT_02748 0.54 +0.5 334,419 + H281DRAFT_02748 0.54 +0.3 334,830 - H281DRAFT_02748 0.64 -0.3 335,477 - H281DRAFT_02748 0.79 +0.4 335,478 + H281DRAFT_02748 0.80 -0.7 335,479 - H281DRAFT_02748 0.80 +0.4 335,479 - H281DRAFT_02748 0.80 -0.6 335,479 - H281DRAFT_02748 0.80 -0.3 335,539 - H281DRAFT_02748 0.81 -1.4 335,670 - H281DRAFT_02748 0.84 -0.9 335,670 - H281DRAFT_02748 0.84 +0.1 335,932 - -0.3 335,964 + -0.2 336,084 + +0.0 336,084 + -1.6 336,911 + +0.1 337,040 + +0.3 337,041 - -0.8 337,059 - +0.6 337,080 + +1.4 337,081 - +0.2 337,239 - +0.1 337,325 + -0.7
Or see this region's nucleotide sequence