Experiment: PYE with Aluminum chloride 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CCNA_02624 and CCNA_02625 are separated by 30 nucleotides CCNA_02625 and CCNA_02626 overlap by 32 nucleotides CCNA_02626 and CCNA_02627 are separated by 222 nucleotides
CCNA_02624: CCNA_02624 - cell division protein FtsA, at 2,773,477 to 2,774,802
_02624
CCNA_02625: CCNA_02625 - cell division protein FtsQ, at 2,774,833 to 2,775,741
_02625
CCNA_02626: CCNA_02626 - D-alanine--D-alanine ligase, at 2,775,710 to 2,776,684
_02626
CCNA_02627: CCNA_02627 - aminopeptidase, at 2,776,907 to 2,778,310
_02627
Position (kb)
2775
2776
2777 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2774.860 kb on + strand at 2774.880 kb on + strand at 2775.707 kb on + strand at 2775.707 kb on + strand at 2775.707 kb on + strand at 2775.715 kb on - strand at 2776.698 kb on + strand at 2776.715 kb on - strand at 2776.745 kb on + strand at 2776.753 kb on + strand at 2776.769 kb on - strand at 2776.775 kb on - strand at 2776.780 kb on + strand at 2776.801 kb on + strand at 2776.815 kb on + strand at 2776.886 kb on + strand at 2776.886 kb on + strand at 2776.901 kb on - strand at 2776.901 kb on - strand at 2776.945 kb on + strand at 2776.968 kb on + strand at 2776.976 kb on - strand at 2776.982 kb on + strand at 2777.005 kb on - strand at 2777.006 kb on - strand at 2777.022 kb on + strand at 2777.030 kb on - strand at 2777.046 kb on + strand at 2777.054 kb on - strand, within CCNA_02627 at 2777.150 kb on + strand, within CCNA_02627 at 2777.160 kb on + strand, within CCNA_02627 at 2777.160 kb on + strand, within CCNA_02627 at 2777.168 kb on - strand, within CCNA_02627 at 2777.168 kb on - strand, within CCNA_02627 at 2777.168 kb on - strand, within CCNA_02627 at 2777.204 kb on - strand, within CCNA_02627 at 2777.241 kb on + strand, within CCNA_02627 at 2777.241 kb on + strand, within CCNA_02627 at 2777.275 kb on - strand, within CCNA_02627 at 2777.288 kb on + strand, within CCNA_02627 at 2777.294 kb on - strand, within CCNA_02627 at 2777.294 kb on - strand, within CCNA_02627 at 2777.322 kb on + strand, within CCNA_02627 at 2777.349 kb on - strand, within CCNA_02627 at 2777.359 kb on - strand at 2777.385 kb on + strand at 2777.424 kb on + strand, within CCNA_02627 at 2777.467 kb on + strand, within CCNA_02627 at 2777.475 kb on - strand, within CCNA_02627 at 2777.475 kb on - strand, within CCNA_02627 at 2777.475 kb on - strand, within CCNA_02627 at 2777.477 kb on + strand, within CCNA_02627 at 2777.480 kb on - strand, within CCNA_02627 at 2777.485 kb on - strand, within CCNA_02627 at 2777.485 kb on - strand, within CCNA_02627 at 2777.485 kb on - strand, within CCNA_02627 at 2777.523 kb on + strand, within CCNA_02627 at 2777.523 kb on + strand, within CCNA_02627 at 2777.553 kb on + strand, within CCNA_02627 at 2777.571 kb on - strand, within CCNA_02627 at 2777.581 kb on + strand, within CCNA_02627 at 2777.582 kb on - strand, within CCNA_02627 at 2777.605 kb on - strand, within CCNA_02627 at 2777.630 kb on - strand, within CCNA_02627 at 2777.640 kb on - strand, within CCNA_02627 at 2777.669 kb on + strand, within CCNA_02627 at 2777.672 kb on + strand, within CCNA_02627
Per-strain Table
Position Strand Gene LocusTag Fraction PYE with Aluminum chloride 1.25 mM remove 2,774,860 + -2.7 2,774,880 + -2.2 2,775,707 + -0.8 2,775,707 + -0.9 2,775,707 + +0.4 2,775,715 - +2.4 2,776,698 + +1.5 2,776,715 - +0.2 2,776,745 + -0.8 2,776,753 + +2.1 2,776,769 - -0.0 2,776,775 - +0.7 2,776,780 + -1.3 2,776,801 + -0.0 2,776,815 + +0.5 2,776,886 + -1.6 2,776,886 + -2.1 2,776,901 - +0.9 2,776,901 - +0.9 2,776,945 + -0.3 2,776,968 + -0.0 2,776,976 - +0.4 2,776,982 + -2.4 2,777,005 - +1.1 2,777,006 - +0.4 2,777,022 + -0.5 2,777,030 - +1.2 2,777,046 + -1.2 2,777,054 - CCNA_02627 0.10 +1.2 2,777,150 + CCNA_02627 0.17 -0.3 2,777,160 + CCNA_02627 0.18 -0.9 2,777,160 + CCNA_02627 0.18 -1.2 2,777,168 - CCNA_02627 0.19 +0.6 2,777,168 - CCNA_02627 0.19 -0.8 2,777,168 - CCNA_02627 0.19 -0.7 2,777,204 - CCNA_02627 0.21 +0.6 2,777,241 + CCNA_02627 0.24 +0.7 2,777,241 + CCNA_02627 0.24 +0.8 2,777,275 - CCNA_02627 0.26 -1.1 2,777,288 + CCNA_02627 0.27 -1.6 2,777,294 - CCNA_02627 0.28 -0.3 2,777,294 - CCNA_02627 0.28 +0.7 2,777,322 + CCNA_02627 0.30 -1.0 2,777,349 - CCNA_02627 0.31 -0.2 2,777,359 - +0.7 2,777,385 + +2.0 2,777,424 + CCNA_02627 0.37 -0.3 2,777,467 + CCNA_02627 0.40 +1.0 2,777,475 - CCNA_02627 0.40 +1.3 2,777,475 - CCNA_02627 0.40 +1.2 2,777,475 - CCNA_02627 0.40 +1.2 2,777,477 + CCNA_02627 0.41 -1.8 2,777,480 - CCNA_02627 0.41 +0.3 2,777,485 - CCNA_02627 0.41 +0.4 2,777,485 - CCNA_02627 0.41 +0.2 2,777,485 - CCNA_02627 0.41 +0.1 2,777,523 + CCNA_02627 0.44 -0.8 2,777,523 + CCNA_02627 0.44 -1.9 2,777,553 + CCNA_02627 0.46 -2.1 2,777,571 - CCNA_02627 0.47 -2.7 2,777,581 + CCNA_02627 0.48 -0.0 2,777,582 - CCNA_02627 0.48 -0.7 2,777,605 - CCNA_02627 0.50 +1.4 2,777,630 - CCNA_02627 0.51 -2.5 2,777,640 - CCNA_02627 0.52 +0.6 2,777,669 + CCNA_02627 0.54 -1.1 2,777,672 + CCNA_02627 0.54 -0.6
Or see this region's nucleotide sequence