Experiment: Bacitracin 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_896 and Ac3H11_897 are separated by 93 nucleotides Ac3H11_897 and Ac3H11_898 are separated by 358 nucleotides Ac3H11_898 and Ac3H11_899 are separated by 17 nucleotides
Ac3H11_896 - macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif., at 2,494 to 6,606
_896
Ac3H11_897 - Beta-lactamase (EC 3.5.2.6), at 6,700 to 8,571
_897
Ac3H11_898 - hypothetical protein, at 8,930 to 9,181
_898
Ac3H11_899 - Cell division protein FtsH (EC 3.4.24.-), at 9,199 to 11,226
_899
Position (kb)
6
7
8
9 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 6.065 kb on + strand, within Ac3H11_896 at 6.065 kb on + strand, within Ac3H11_896 at 6.065 kb on + strand, within Ac3H11_896 at 6.128 kb on + strand, within Ac3H11_896 at 6.634 kb on + strand at 6.634 kb on + strand at 6.634 kb on + strand at 6.634 kb on + strand at 6.635 kb on - strand at 6.635 kb on - strand at 6.749 kb on + strand at 6.887 kb on + strand at 6.888 kb on - strand, within Ac3H11_897 at 7.259 kb on + strand, within Ac3H11_897 at 7.259 kb on + strand at 7.259 kb on + strand, within Ac3H11_897 at 7.260 kb on - strand, within Ac3H11_897 at 7.260 kb on - strand, within Ac3H11_897 at 7.315 kb on + strand, within Ac3H11_897 at 7.315 kb on + strand, within Ac3H11_897 at 7.315 kb on + strand, within Ac3H11_897 at 7.316 kb on - strand, within Ac3H11_897 at 7.316 kb on - strand, within Ac3H11_897 at 7.375 kb on + strand, within Ac3H11_897 at 7.474 kb on + strand, within Ac3H11_897 at 7.475 kb on - strand, within Ac3H11_897 at 7.475 kb on - strand, within Ac3H11_897 at 7.475 kb on - strand, within Ac3H11_897 at 7.792 kb on + strand, within Ac3H11_897 at 7.792 kb on + strand, within Ac3H11_897 at 7.792 kb on + strand, within Ac3H11_897 at 7.792 kb on + strand, within Ac3H11_897 at 7.792 kb on + strand, within Ac3H11_897 at 7.793 kb on - strand, within Ac3H11_897 at 7.793 kb on - strand, within Ac3H11_897 at 7.793 kb on - strand, within Ac3H11_897 at 7.793 kb on - strand, within Ac3H11_897 at 7.793 kb on - strand, within Ac3H11_897 at 7.793 kb on - strand, within Ac3H11_897 at 7.793 kb on - strand, within Ac3H11_897 at 7.993 kb on + strand, within Ac3H11_897 at 7.993 kb on + strand, within Ac3H11_897 at 7.993 kb on + strand, within Ac3H11_897 at 7.993 kb on + strand, within Ac3H11_897 at 7.993 kb on + strand, within Ac3H11_897 at 7.994 kb on - strand, within Ac3H11_897 at 7.994 kb on - strand, within Ac3H11_897 at 7.994 kb on - strand, within Ac3H11_897 at 7.994 kb on - strand, within Ac3H11_897 at 7.994 kb on - strand, within Ac3H11_897 at 7.994 kb on - strand, within Ac3H11_897 at 8.155 kb on + strand, within Ac3H11_897 at 8.185 kb on + strand, within Ac3H11_897 at 8.221 kb on + strand, within Ac3H11_897 at 8.644 kb on + strand at 8.644 kb on + strand at 8.645 kb on - strand at 8.645 kb on - strand at 8.764 kb on + strand at 8.765 kb on - strand at 8.765 kb on - strand at 8.765 kb on - strand at 8.895 kb on - strand at 8.895 kb on - strand at 9.198 kb on + strand at 9.198 kb on + strand at 9.198 kb on + strand at 9.199 kb on - strand at 9.199 kb on - strand at 9.199 kb on - strand at 9.199 kb on - strand at 9.379 kb on + strand at 9.380 kb on - strand at 9.380 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.032 mg/ml remove 6,065 + Ac3H11_896 0.87 -1.0 6,065 + Ac3H11_896 0.87 +0.3 6,065 + Ac3H11_896 0.87 -0.7 6,128 + Ac3H11_896 0.88 -1.4 6,634 + -0.3 6,634 + +1.6 6,634 + +0.0 6,634 + -0.3 6,635 - -1.2 6,635 - +0.5 6,749 + +0.3 6,887 + +0.2 6,888 - Ac3H11_897 0.10 +1.1 7,259 + Ac3H11_897 0.30 -3.4 7,259 + +0.5 7,259 + Ac3H11_897 0.30 -0.2 7,260 - Ac3H11_897 0.30 -0.7 7,260 - Ac3H11_897 0.30 -0.1 7,315 + Ac3H11_897 0.33 -1.1 7,315 + Ac3H11_897 0.33 +1.7 7,315 + Ac3H11_897 0.33 +1.7 7,316 - Ac3H11_897 0.33 -0.3 7,316 - Ac3H11_897 0.33 -3.0 7,375 + Ac3H11_897 0.36 +0.8 7,474 + Ac3H11_897 0.41 -0.4 7,475 - Ac3H11_897 0.41 -1.1 7,475 - Ac3H11_897 0.41 -0.6 7,475 - Ac3H11_897 0.41 +0.7 7,792 + Ac3H11_897 0.58 +0.0 7,792 + Ac3H11_897 0.58 -0.4 7,792 + Ac3H11_897 0.58 -0.1 7,792 + Ac3H11_897 0.58 -1.8 7,792 + Ac3H11_897 0.58 +1.3 7,793 - Ac3H11_897 0.58 +1.0 7,793 - Ac3H11_897 0.58 -0.2 7,793 - Ac3H11_897 0.58 -0.5 7,793 - Ac3H11_897 0.58 +0.2 7,793 - Ac3H11_897 0.58 -0.8 7,793 - Ac3H11_897 0.58 -0.5 7,793 - Ac3H11_897 0.58 -1.0 7,993 + Ac3H11_897 0.69 +1.1 7,993 + Ac3H11_897 0.69 -0.0 7,993 + Ac3H11_897 0.69 -0.3 7,993 + Ac3H11_897 0.69 -2.7 7,993 + Ac3H11_897 0.69 -3.5 7,994 - Ac3H11_897 0.69 +0.6 7,994 - Ac3H11_897 0.69 -1.9 7,994 - Ac3H11_897 0.69 -0.4 7,994 - Ac3H11_897 0.69 +2.4 7,994 - Ac3H11_897 0.69 -1.3 7,994 - Ac3H11_897 0.69 +0.1 8,155 + Ac3H11_897 0.78 +0.5 8,185 + Ac3H11_897 0.79 +0.0 8,221 + Ac3H11_897 0.81 +1.0 8,644 + -1.9 8,644 + +0.2 8,645 - -0.6 8,645 - +1.5 8,764 + -0.6 8,765 - +0.3 8,765 - -0.7 8,765 - +0.2 8,895 - -0.1 8,895 - -0.7 9,198 + -0.1 9,198 + -1.8 9,198 + +1.0 9,199 - -1.2 9,199 - -0.9 9,199 - +1.5 9,199 - +0.2 9,379 + -0.0 9,380 - -0.7 9,380 - -1.0
Or see this region's nucleotide sequence