Experiment: Bacitracin 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4493 and Ac3H11_4494 are separated by 20 nucleotides Ac3H11_4494 and Ac3H11_4495 overlap by 4 nucleotides Ac3H11_4495 and Ac3H11_4496 are separated by 153 nucleotides
Ac3H11_4493 - Respiratory nitrate reductase beta chain (EC 1.7.99.4), at 85,590 to 87,113
_4493
Ac3H11_4494 - Respiratory nitrate reductase delta chain (EC 1.7.99.4), at 87,134 to 87,835
_4494
Ac3H11_4495 - Respiratory nitrate reductase gamma chain (EC 1.7.99.4), at 87,832 to 88,563
_4495
Ac3H11_4496 - PpiC-type peptidyl-prolyl cis-trans isomerase, at 88,717 to 89,550
_4496
Position (kb)
87
88 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 86.190 kb on + strand, within Ac3H11_4493 at 86.191 kb on - strand, within Ac3H11_4493 at 86.271 kb on + strand, within Ac3H11_4493 at 86.271 kb on + strand, within Ac3H11_4493 at 86.272 kb on - strand, within Ac3H11_4493 at 86.272 kb on - strand, within Ac3H11_4493 at 86.272 kb on - strand, within Ac3H11_4493 at 86.283 kb on + strand, within Ac3H11_4493 at 86.283 kb on + strand, within Ac3H11_4493 at 86.287 kb on - strand, within Ac3H11_4493 at 86.287 kb on - strand, within Ac3H11_4493 at 86.410 kb on - strand, within Ac3H11_4493 at 86.463 kb on + strand, within Ac3H11_4493 at 86.464 kb on - strand, within Ac3H11_4493 at 86.577 kb on + strand, within Ac3H11_4493 at 86.649 kb on + strand, within Ac3H11_4493 at 86.649 kb on + strand, within Ac3H11_4493 at 86.649 kb on + strand, within Ac3H11_4493 at 86.649 kb on + strand, within Ac3H11_4493 at 86.650 kb on - strand, within Ac3H11_4493 at 86.650 kb on - strand, within Ac3H11_4493 at 86.650 kb on - strand, within Ac3H11_4493 at 86.650 kb on - strand, within Ac3H11_4493 at 86.751 kb on + strand, within Ac3H11_4493 at 86.829 kb on + strand, within Ac3H11_4493 at 86.830 kb on - strand, within Ac3H11_4493 at 86.916 kb on + strand, within Ac3H11_4493 at 86.916 kb on + strand, within Ac3H11_4493 at 86.916 kb on + strand, within Ac3H11_4493 at 86.916 kb on + strand, within Ac3H11_4493 at 86.916 kb on + strand, within Ac3H11_4493 at 86.916 kb on + strand, within Ac3H11_4493 at 86.916 kb on + strand, within Ac3H11_4493 at 86.916 kb on + strand, within Ac3H11_4493 at 86.917 kb on - strand, within Ac3H11_4493 at 86.917 kb on - strand, within Ac3H11_4493 at 86.917 kb on - strand, within Ac3H11_4493 at 86.917 kb on - strand, within Ac3H11_4493 at 86.917 kb on - strand, within Ac3H11_4493 at 86.940 kb on + strand, within Ac3H11_4493 at 86.940 kb on + strand, within Ac3H11_4493 at 86.940 kb on + strand, within Ac3H11_4493 at 86.941 kb on - strand, within Ac3H11_4493 at 86.941 kb on - strand, within Ac3H11_4493 at 86.941 kb on - strand, within Ac3H11_4493 at 86.941 kb on - strand, within Ac3H11_4493 at 86.941 kb on - strand, within Ac3H11_4493 at 86.980 kb on - strand at 87.098 kb on + strand at 87.098 kb on + strand at 87.185 kb on + strand at 87.270 kb on + strand, within Ac3H11_4494 at 87.344 kb on + strand, within Ac3H11_4494 at 87.345 kb on - strand, within Ac3H11_4494 at 87.452 kb on + strand, within Ac3H11_4494 at 87.452 kb on + strand, within Ac3H11_4494 at 87.453 kb on - strand, within Ac3H11_4494 at 87.453 kb on - strand, within Ac3H11_4494 at 87.620 kb on + strand, within Ac3H11_4494 at 87.620 kb on + strand, within Ac3H11_4494 at 87.850 kb on - strand at 87.868 kb on + strand at 87.868 kb on + strand at 87.868 kb on + strand at 87.868 kb on + strand at 87.868 kb on + strand at 87.868 kb on + strand at 87.868 kb on + strand at 87.868 kb on + strand at 87.868 kb on + strand at 87.868 kb on + strand at 87.868 kb on + strand at 87.869 kb on - strand at 87.869 kb on - strand at 87.869 kb on - strand at 87.869 kb on - strand at 87.869 kb on - strand at 87.869 kb on - strand at 87.869 kb on - strand at 87.869 kb on - strand at 87.869 kb on - strand at 87.874 kb on + strand at 87.875 kb on - strand at 87.875 kb on - strand at 87.875 kb on - strand at 87.876 kb on + strand at 87.876 kb on + strand at 87.877 kb on - strand at 87.877 kb on - strand at 87.877 kb on - strand at 87.877 kb on - strand at 87.932 kb on - strand, within Ac3H11_4495 at 87.932 kb on - strand, within Ac3H11_4495 at 87.932 kb on - strand, within Ac3H11_4495 at 88.063 kb on + strand, within Ac3H11_4495 at 88.063 kb on + strand, within Ac3H11_4495 at 88.063 kb on + strand, within Ac3H11_4495 at 88.063 kb on + strand, within Ac3H11_4495 at 88.395 kb on + strand, within Ac3H11_4495 at 88.395 kb on + strand, within Ac3H11_4495 at 88.395 kb on + strand, within Ac3H11_4495 at 88.395 kb on + strand, within Ac3H11_4495 at 88.396 kb on - strand, within Ac3H11_4495 at 88.396 kb on - strand, within Ac3H11_4495 at 88.396 kb on - strand, within Ac3H11_4495 at 88.396 kb on - strand, within Ac3H11_4495 at 88.396 kb on - strand, within Ac3H11_4495 at 88.477 kb on + strand, within Ac3H11_4495 at 88.477 kb on + strand, within Ac3H11_4495 at 88.477 kb on + strand, within Ac3H11_4495 at 88.478 kb on - strand, within Ac3H11_4495 at 88.478 kb on - strand, within Ac3H11_4495 at 88.478 kb on - strand, within Ac3H11_4495 at 88.478 kb on - strand, within Ac3H11_4495 at 88.478 kb on - strand, within Ac3H11_4495 at 88.696 kb on + strand at 88.697 kb on - strand at 88.697 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.032 mg/ml remove 86,190 + Ac3H11_4493 0.39 -1.9 86,191 - Ac3H11_4493 0.39 +0.8 86,271 + Ac3H11_4493 0.45 +1.1 86,271 + Ac3H11_4493 0.45 +0.5 86,272 - Ac3H11_4493 0.45 -0.4 86,272 - Ac3H11_4493 0.45 -1.3 86,272 - Ac3H11_4493 0.45 -1.1 86,283 + Ac3H11_4493 0.45 -0.0 86,283 + Ac3H11_4493 0.45 +1.3 86,287 - Ac3H11_4493 0.46 +0.1 86,287 - Ac3H11_4493 0.46 +1.9 86,410 - Ac3H11_4493 0.54 -1.1 86,463 + Ac3H11_4493 0.57 +1.5 86,464 - Ac3H11_4493 0.57 -0.8 86,577 + Ac3H11_4493 0.65 -0.1 86,649 + Ac3H11_4493 0.69 +1.0 86,649 + Ac3H11_4493 0.69 +1.3 86,649 + Ac3H11_4493 0.69 +1.3 86,649 + Ac3H11_4493 0.69 -0.5 86,650 - Ac3H11_4493 0.70 +0.3 86,650 - Ac3H11_4493 0.70 -2.0 86,650 - Ac3H11_4493 0.70 +0.4 86,650 - Ac3H11_4493 0.70 +0.5 86,751 + Ac3H11_4493 0.76 +2.2 86,829 + Ac3H11_4493 0.81 +0.7 86,830 - Ac3H11_4493 0.81 -1.2 86,916 + Ac3H11_4493 0.87 -0.2 86,916 + Ac3H11_4493 0.87 +0.9 86,916 + Ac3H11_4493 0.87 +0.7 86,916 + Ac3H11_4493 0.87 +1.4 86,916 + Ac3H11_4493 0.87 -0.2 86,916 + Ac3H11_4493 0.87 +0.4 86,916 + Ac3H11_4493 0.87 +0.1 86,916 + Ac3H11_4493 0.87 +0.0 86,917 - Ac3H11_4493 0.87 +2.6 86,917 - Ac3H11_4493 0.87 -0.1 86,917 - Ac3H11_4493 0.87 +0.2 86,917 - Ac3H11_4493 0.87 -2.6 86,917 - Ac3H11_4493 0.87 +1.6 86,940 + Ac3H11_4493 0.89 -0.5 86,940 + Ac3H11_4493 0.89 +0.9 86,940 + Ac3H11_4493 0.89 +0.7 86,941 - Ac3H11_4493 0.89 +0.1 86,941 - Ac3H11_4493 0.89 -1.7 86,941 - Ac3H11_4493 0.89 +0.8 86,941 - Ac3H11_4493 0.89 -1.8 86,941 - Ac3H11_4493 0.89 +0.3 86,980 - -0.2 87,098 + +1.2 87,098 + +0.7 87,185 + +1.1 87,270 + Ac3H11_4494 0.19 -1.4 87,344 + Ac3H11_4494 0.30 -0.3 87,345 - Ac3H11_4494 0.30 -0.3 87,452 + Ac3H11_4494 0.45 +1.3 87,452 + Ac3H11_4494 0.45 -0.2 87,453 - Ac3H11_4494 0.45 +0.2 87,453 - Ac3H11_4494 0.45 +0.5 87,620 + Ac3H11_4494 0.69 -1.3 87,620 + Ac3H11_4494 0.69 +0.5 87,850 - -1.2 87,868 + +1.1 87,868 + +0.6 87,868 + +0.2 87,868 + +1.4 87,868 + +0.9 87,868 + +0.2 87,868 + +0.7 87,868 + +1.8 87,868 + +0.1 87,868 + -0.1 87,868 + -1.3 87,869 - +0.1 87,869 - -1.7 87,869 - -0.4 87,869 - +0.1 87,869 - -0.7 87,869 - -0.0 87,869 - +0.2 87,869 - +0.7 87,869 - +0.7 87,874 + +1.1 87,875 - +0.4 87,875 - +1.1 87,875 - -1.8 87,876 + +0.2 87,876 + -2.4 87,877 - +1.1 87,877 - +0.4 87,877 - -0.0 87,877 - -0.7 87,932 - Ac3H11_4495 0.14 -2.3 87,932 - Ac3H11_4495 0.14 +0.7 87,932 - Ac3H11_4495 0.14 +1.3 88,063 + Ac3H11_4495 0.32 +0.2 88,063 + Ac3H11_4495 0.32 -0.3 88,063 + Ac3H11_4495 0.32 +0.6 88,063 + Ac3H11_4495 0.32 +0.3 88,395 + Ac3H11_4495 0.77 -1.1 88,395 + Ac3H11_4495 0.77 +0.5 88,395 + Ac3H11_4495 0.77 +0.6 88,395 + Ac3H11_4495 0.77 -3.1 88,396 - Ac3H11_4495 0.77 +2.0 88,396 - Ac3H11_4495 0.77 -1.6 88,396 - Ac3H11_4495 0.77 -0.3 88,396 - Ac3H11_4495 0.77 +0.9 88,396 - Ac3H11_4495 0.77 +1.1 88,477 + Ac3H11_4495 0.88 -0.4 88,477 + Ac3H11_4495 0.88 +0.1 88,477 + Ac3H11_4495 0.88 +0.4 88,478 - Ac3H11_4495 0.88 +0.5 88,478 - Ac3H11_4495 0.88 +0.4 88,478 - Ac3H11_4495 0.88 -0.3 88,478 - Ac3H11_4495 0.88 +0.5 88,478 - Ac3H11_4495 0.88 +0.4 88,696 + +1.6 88,697 - +1.4 88,697 - +1.0
Or see this region's nucleotide sequence