Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_384

Experiment: Bacitracin 0.032 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_383 and Ac3H11_384 are separated by 156 nucleotidesAc3H11_384 and Ac3H11_385 are separated by 76 nucleotidesAc3H11_385 and Ac3H11_386 are separated by 100 nucleotides Ac3H11_383 - FIG01198699: hypothetical protein, at 61,297 to 63,186 _383 Ac3H11_384 - possible endonuclease/exonuclease/phosphatase family protein, at 63,343 to 64,386 _384 Ac3H11_385 - Nucleoside-diphosphate-sugar epimerases, at 64,463 to 65,023 _385 Ac3H11_386 - ATP-dependent RNA helicase RhlE, at 65,124 to 66,935 _386 Position (kb) 63 64 65Strain fitness (log2 ratio) -2 -1 0 1 2at 62.685 kb on + strand, within Ac3H11_383at 62.685 kb on + strand, within Ac3H11_383at 62.685 kb on + strand, within Ac3H11_383at 62.686 kb on - strand, within Ac3H11_383at 62.786 kb on + strand, within Ac3H11_383at 62.786 kb on + strand, within Ac3H11_383at 62.786 kb on + strand, within Ac3H11_383at 62.786 kb on + strand, within Ac3H11_383at 62.787 kb on - strand, within Ac3H11_383at 62.787 kb on - strand, within Ac3H11_383at 62.787 kb on - strand, within Ac3H11_383at 62.787 kb on - strand, within Ac3H11_383at 62.832 kb on - strand, within Ac3H11_383at 62.832 kb on - strand, within Ac3H11_383at 62.832 kb on - strand, within Ac3H11_383at 63.235 kb on + strandat 63.235 kb on + strandat 63.235 kb on + strandat 63.235 kb on + strandat 63.235 kb on + strandat 63.235 kb on + strandat 63.235 kb on + strandat 63.235 kb on + strandat 63.236 kb on - strandat 63.236 kb on - strandat 63.236 kb on - strandat 63.236 kb on - strandat 63.236 kb on - strandat 63.236 kb on - strandat 63.238 kb on + strandat 63.238 kb on + strandat 63.238 kb on + strandat 63.238 kb on + strandat 63.238 kb on + strandat 63.238 kb on + strandat 63.238 kb on + strandat 63.238 kb on + strandat 63.239 kb on - strandat 63.239 kb on - strandat 63.239 kb on - strandat 63.263 kb on - strandat 63.270 kb on + strandat 63.270 kb on + strandat 63.271 kb on - strandat 63.271 kb on - strandat 63.271 kb on - strandat 63.344 kb on + strandat 63.345 kb on - strandat 63.455 kb on + strand, within Ac3H11_384at 63.455 kb on + strand, within Ac3H11_384at 63.455 kb on + strand, within Ac3H11_384at 63.456 kb on - strand, within Ac3H11_384at 63.456 kb on - strand, within Ac3H11_384at 63.456 kb on - strand, within Ac3H11_384at 63.456 kb on - strand, within Ac3H11_384at 63.605 kb on + strand, within Ac3H11_384at 63.605 kb on + strand, within Ac3H11_384at 63.742 kb on + strand, within Ac3H11_384at 63.742 kb on + strand, within Ac3H11_384at 63.742 kb on + strand, within Ac3H11_384at 63.742 kb on + strand, within Ac3H11_384at 63.743 kb on - strand, within Ac3H11_384at 63.743 kb on - strand, within Ac3H11_384at 63.743 kb on - strandat 63.743 kb on - strand, within Ac3H11_384at 64.036 kb on + strand, within Ac3H11_384at 64.140 kb on - strand, within Ac3H11_384at 64.140 kb on - strand, within Ac3H11_384at 64.277 kb on + strand, within Ac3H11_384at 64.277 kb on + strand, within Ac3H11_384at 64.277 kb on + strand, within Ac3H11_384at 64.277 kb on + strand, within Ac3H11_384at 64.278 kb on - strand, within Ac3H11_384at 64.278 kb on - strand, within Ac3H11_384at 64.278 kb on - strand, within Ac3H11_384at 64.295 kb on + strandat 64.295 kb on + strandat 64.296 kb on - strandat 64.296 kb on - strandat 64.296 kb on - strandat 64.412 kb on - strandat 64.520 kb on + strand, within Ac3H11_385at 64.520 kb on + strand, within Ac3H11_385at 64.520 kb on + strand, within Ac3H11_385at 64.521 kb on - strand, within Ac3H11_385at 64.569 kb on + strand, within Ac3H11_385at 64.569 kb on + strand, within Ac3H11_385at 64.569 kb on + strand, within Ac3H11_385at 64.569 kb on + strand, within Ac3H11_385at 64.570 kb on - strand, within Ac3H11_385at 64.570 kb on - strand, within Ac3H11_385at 64.570 kb on - strand, within Ac3H11_385at 64.684 kb on + strand, within Ac3H11_385at 64.749 kb on + strand, within Ac3H11_385at 64.749 kb on + strand, within Ac3H11_385at 64.749 kb on + strand, within Ac3H11_385at 64.750 kb on - strand, within Ac3H11_385at 64.750 kb on - strand, within Ac3H11_385at 64.750 kb on - strand, within Ac3H11_385at 64.790 kb on + strand, within Ac3H11_385at 64.790 kb on + strand, within Ac3H11_385at 64.790 kb on + strand, within Ac3H11_385at 64.791 kb on - strand, within Ac3H11_385at 64.851 kb on + strand, within Ac3H11_385at 64.851 kb on + strand, within Ac3H11_385at 64.852 kb on - strand, within Ac3H11_385at 64.852 kb on - strand, within Ac3H11_385at 64.852 kb on - strand, within Ac3H11_385at 64.852 kb on - strand, within Ac3H11_385at 64.914 kb on + strand, within Ac3H11_385at 64.914 kb on + strand, within Ac3H11_385at 64.914 kb on + strand, within Ac3H11_385at 64.914 kb on + strand, within Ac3H11_385at 64.914 kb on + strand, within Ac3H11_385at 64.914 kb on + strand, within Ac3H11_385at 64.914 kb on + strand, within Ac3H11_385at 64.914 kb on + strand, within Ac3H11_385at 64.914 kb on + strand, within Ac3H11_385at 64.914 kb on + strand, within Ac3H11_385at 64.914 kb on + strand, within Ac3H11_385at 64.915 kb on - strand, within Ac3H11_385at 64.915 kb on - strand, within Ac3H11_385at 64.915 kb on - strand, within Ac3H11_385at 64.915 kb on - strand, within Ac3H11_385at 64.915 kb on - strand, within Ac3H11_385at 64.915 kb on - strand, within Ac3H11_385at 64.915 kb on - strand, within Ac3H11_385at 64.915 kb on - strand, within Ac3H11_385at 64.915 kb on - strand, within Ac3H11_385at 64.915 kb on - strand, within Ac3H11_385at 64.915 kb on - strand, within Ac3H11_385at 64.915 kb on - strand, within Ac3H11_385at 64.915 kb on - strand, within Ac3H11_385at 65.133 kb on - strandat 65.133 kb on - strandat 65.271 kb on + strandat 65.272 kb on - strandat 65.355 kb on - strand, within Ac3H11_386

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Per-strain Table

Position Strand Gene LocusTag Fraction Bacitracin 0.032 mg/ml
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62,685 + Ac3H11_383 0.73 -0.1
62,685 + Ac3H11_383 0.73 +0.5
62,685 + Ac3H11_383 0.73 -2.0
62,686 - Ac3H11_383 0.73 -0.6
62,786 + Ac3H11_383 0.79 -1.0
62,786 + Ac3H11_383 0.79 +0.2
62,786 + Ac3H11_383 0.79 -0.2
62,786 + Ac3H11_383 0.79 -0.9
62,787 - Ac3H11_383 0.79 +0.2
62,787 - Ac3H11_383 0.79 +0.0
62,787 - Ac3H11_383 0.79 -0.5
62,787 - Ac3H11_383 0.79 +0.5
62,832 - Ac3H11_383 0.81 -0.4
62,832 - Ac3H11_383 0.81 -0.6
62,832 - Ac3H11_383 0.81 -0.8
63,235 + +0.8
63,235 + +0.3
63,235 + +0.9
63,235 + -1.0
63,235 + +0.5
63,235 + -1.3
63,235 + -0.7
63,235 + +1.4
63,236 - -0.2
63,236 - +0.2
63,236 - +1.8
63,236 - +0.6
63,236 - +0.2
63,236 - +0.4
63,238 + -0.7
63,238 + +1.0
63,238 + -0.6
63,238 + +1.8
63,238 + -0.1
63,238 + -1.8
63,238 + -1.0
63,238 + -0.1
63,239 - +0.5
63,239 - +0.2
63,239 - +1.1
63,263 - -0.5
63,270 + +1.7
63,270 + -1.3
63,271 - +0.2
63,271 - -1.0
63,271 - +0.4
63,344 + +1.6
63,345 - -2.3
63,455 + Ac3H11_384 0.11 +0.2
63,455 + Ac3H11_384 0.11 +0.3
63,455 + Ac3H11_384 0.11 -0.8
63,456 - Ac3H11_384 0.11 +0.7
63,456 - Ac3H11_384 0.11 +0.6
63,456 - Ac3H11_384 0.11 +0.1
63,456 - Ac3H11_384 0.11 -0.1
63,605 + Ac3H11_384 0.25 -1.8
63,605 + Ac3H11_384 0.25 -0.4
63,742 + Ac3H11_384 0.38 -0.8
63,742 + Ac3H11_384 0.38 -0.3
63,742 + Ac3H11_384 0.38 -0.8
63,742 + Ac3H11_384 0.38 +0.6
63,743 - Ac3H11_384 0.38 +0.5
63,743 - Ac3H11_384 0.38 +1.0
63,743 - +1.6
63,743 - Ac3H11_384 0.38 -1.0
64,036 + Ac3H11_384 0.66 +0.6
64,140 - Ac3H11_384 0.76 -0.2
64,140 - Ac3H11_384 0.76 -1.6
64,277 + Ac3H11_384 0.89 -1.8
64,277 + Ac3H11_384 0.89 -1.2
64,277 + Ac3H11_384 0.89 +0.3
64,277 + Ac3H11_384 0.89 +0.0
64,278 - Ac3H11_384 0.90 +0.4
64,278 - Ac3H11_384 0.90 +0.6
64,278 - Ac3H11_384 0.90 +1.4
64,295 + -0.2
64,295 + +1.2
64,296 - +0.6
64,296 - -0.6
64,296 - -0.2
64,412 - +1.0
64,520 + Ac3H11_385 0.10 -0.0
64,520 + Ac3H11_385 0.10 +1.8
64,520 + Ac3H11_385 0.10 -0.9
64,521 - Ac3H11_385 0.10 -0.3
64,569 + Ac3H11_385 0.19 +0.7
64,569 + Ac3H11_385 0.19 +0.1
64,569 + Ac3H11_385 0.19 +0.3
64,569 + Ac3H11_385 0.19 +0.7
64,570 - Ac3H11_385 0.19 +0.3
64,570 - Ac3H11_385 0.19 +0.0
64,570 - Ac3H11_385 0.19 +0.7
64,684 + Ac3H11_385 0.39 +1.6
64,749 + Ac3H11_385 0.51 -0.1
64,749 + Ac3H11_385 0.51 -0.4
64,749 + Ac3H11_385 0.51 +0.8
64,750 - Ac3H11_385 0.51 -0.5
64,750 - Ac3H11_385 0.51 +0.0
64,750 - Ac3H11_385 0.51 +0.7
64,790 + Ac3H11_385 0.58 +1.8
64,790 + Ac3H11_385 0.58 +1.5
64,790 + Ac3H11_385 0.58 +0.7
64,791 - Ac3H11_385 0.58 -1.6
64,851 + Ac3H11_385 0.69 +0.9
64,851 + Ac3H11_385 0.69 +0.2
64,852 - Ac3H11_385 0.69 +0.7
64,852 - Ac3H11_385 0.69 +0.3
64,852 - Ac3H11_385 0.69 -1.3
64,852 - Ac3H11_385 0.69 -0.1
64,914 + Ac3H11_385 0.80 +0.7
64,914 + Ac3H11_385 0.80 -0.4
64,914 + Ac3H11_385 0.80 +0.1
64,914 + Ac3H11_385 0.80 +0.7
64,914 + Ac3H11_385 0.80 -1.1
64,914 + Ac3H11_385 0.80 +0.5
64,914 + Ac3H11_385 0.80 -0.2
64,914 + Ac3H11_385 0.80 +0.6
64,914 + Ac3H11_385 0.80 +1.7
64,914 + Ac3H11_385 0.80 -0.3
64,914 + Ac3H11_385 0.80 -0.2
64,915 - Ac3H11_385 0.81 +0.4
64,915 - Ac3H11_385 0.81 -2.6
64,915 - Ac3H11_385 0.81 +0.6
64,915 - Ac3H11_385 0.81 -1.5
64,915 - Ac3H11_385 0.81 +0.9
64,915 - Ac3H11_385 0.81 -0.7
64,915 - Ac3H11_385 0.81 +0.7
64,915 - Ac3H11_385 0.81 -1.1
64,915 - Ac3H11_385 0.81 -0.3
64,915 - Ac3H11_385 0.81 -0.8
64,915 - Ac3H11_385 0.81 +0.2
64,915 - Ac3H11_385 0.81 +0.5
64,915 - Ac3H11_385 0.81 -0.1
65,133 - +0.1
65,133 - -1.6
65,271 + -2.7
65,272 - -0.5
65,355 - Ac3H11_386 0.13 -0.6

Or see this region's nucleotide sequence