Experiment: Bacitracin 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3686 and Ac3H11_3687 are separated by 119 nucleotides Ac3H11_3687 and Ac3H11_3688 are separated by 64 nucleotides Ac3H11_3688 and Ac3H11_3689 are separated by 7 nucleotides
Ac3H11_3686 - Urease accessory protein UreF, at 44,073 to 44,783
_3686
Ac3H11_3687 - Urease accessory protein UreE, at 44,903 to 45,553
_3687
Ac3H11_3688 - Histone acetyltransferase HPA2, at 45,618 to 46,106
_3688
Ac3H11_3689 - Urease alpha subunit (EC 3.5.1.5), at 46,114 to 47,832
_3689
Position (kb) 45
46
47 Strain fitness (log2 ratio) -2
-1
0
1 at 45.255 kb on + strand, within Ac3H11_3687 at 45.255 kb on + strand, within Ac3H11_3687 at 45.704 kb on - strand, within Ac3H11_3688 at 46.012 kb on + strand, within Ac3H11_3688 at 46.012 kb on + strand, within Ac3H11_3688 at 46.012 kb on + strand, within Ac3H11_3688 at 46.012 kb on + strand, within Ac3H11_3688 at 46.012 kb on + strand, within Ac3H11_3688 at 46.012 kb on + strand, within Ac3H11_3688 at 46.012 kb on + strand, within Ac3H11_3688 at 46.012 kb on + strand, within Ac3H11_3688 at 46.012 kb on + strand, within Ac3H11_3688 at 46.012 kb on + strand, within Ac3H11_3688 at 46.012 kb on + strand, within Ac3H11_3688 at 46.012 kb on + strand, within Ac3H11_3688 at 46.013 kb on - strand, within Ac3H11_3688 at 46.013 kb on - strand, within Ac3H11_3688 at 46.013 kb on - strand, within Ac3H11_3688 at 46.013 kb on - strand, within Ac3H11_3688 at 46.013 kb on - strand, within Ac3H11_3688 at 46.013 kb on - strand, within Ac3H11_3688 at 46.013 kb on - strand, within Ac3H11_3688 at 46.013 kb on - strand, within Ac3H11_3688 at 46.013 kb on - strand, within Ac3H11_3688 at 46.013 kb on - strand, within Ac3H11_3688 at 46.013 kb on - strand, within Ac3H11_3688 at 46.127 kb on + strand at 46.127 kb on + strand at 46.128 kb on - strand at 46.196 kb on + strand at 46.197 kb on - strand at 46.197 kb on - strand at 46.229 kb on + strand at 46.229 kb on + strand at 46.229 kb on + strand at 46.229 kb on + strand at 46.230 kb on - strand at 46.230 kb on - strand at 46.230 kb on - strand at 46.598 kb on + strand, within Ac3H11_3689 at 46.598 kb on + strand, within Ac3H11_3689 at 46.598 kb on + strand, within Ac3H11_3689 at 46.598 kb on + strand, within Ac3H11_3689 at 46.599 kb on - strand, within Ac3H11_3689 at 46.599 kb on - strand, within Ac3H11_3689 at 46.599 kb on - strand, within Ac3H11_3689 at 46.610 kb on + strand, within Ac3H11_3689 at 46.907 kb on + strand, within Ac3H11_3689 at 46.907 kb on + strand, within Ac3H11_3689 at 46.908 kb on - strand, within Ac3H11_3689
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.032 mg/ml remove 45,255 + Ac3H11_3687 0.54 -1.3 45,255 + Ac3H11_3687 0.54 -2.7 45,704 - Ac3H11_3688 0.18 -0.8 46,012 + Ac3H11_3688 0.81 +0.1 46,012 + Ac3H11_3688 0.81 -0.3 46,012 + Ac3H11_3688 0.81 +0.3 46,012 + Ac3H11_3688 0.81 -0.1 46,012 + Ac3H11_3688 0.81 -1.4 46,012 + Ac3H11_3688 0.81 +0.3 46,012 + Ac3H11_3688 0.81 -1.3 46,012 + Ac3H11_3688 0.81 -0.7 46,012 + Ac3H11_3688 0.81 -0.4 46,012 + Ac3H11_3688 0.81 +0.1 46,012 + Ac3H11_3688 0.81 +0.2 46,012 + Ac3H11_3688 0.81 +1.1 46,013 - Ac3H11_3688 0.81 +0.6 46,013 - Ac3H11_3688 0.81 +0.4 46,013 - Ac3H11_3688 0.81 +1.4 46,013 - Ac3H11_3688 0.81 -0.3 46,013 - Ac3H11_3688 0.81 -0.2 46,013 - Ac3H11_3688 0.81 +1.6 46,013 - Ac3H11_3688 0.81 +0.8 46,013 - Ac3H11_3688 0.81 -0.7 46,013 - Ac3H11_3688 0.81 +1.3 46,013 - Ac3H11_3688 0.81 -0.4 46,013 - Ac3H11_3688 0.81 -0.0 46,127 + +0.2 46,127 + +0.6 46,128 - +0.8 46,196 + +0.1 46,197 - -0.9 46,197 - -0.3 46,229 + -0.9 46,229 + +0.4 46,229 + +0.0 46,229 + -1.5 46,230 - +1.5 46,230 - -1.6 46,230 - +0.5 46,598 + Ac3H11_3689 0.28 +0.4 46,598 + Ac3H11_3689 0.28 -0.6 46,598 + Ac3H11_3689 0.28 +0.5 46,598 + Ac3H11_3689 0.28 -2.3 46,599 - Ac3H11_3689 0.28 -0.2 46,599 - Ac3H11_3689 0.28 +1.4 46,599 - Ac3H11_3689 0.28 -0.4 46,610 + Ac3H11_3689 0.29 -0.5 46,907 + Ac3H11_3689 0.46 -1.2 46,907 + Ac3H11_3689 0.46 +0.9 46,908 - Ac3H11_3689 0.46 -0.4
Or see this region's nucleotide sequence