Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_2427

Experiment: Bacitracin 0.032 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_2426 and Ac3H11_2427 are separated by 178 nucleotidesAc3H11_2427 and Ac3H11_2428 are separated by 77 nucleotidesAc3H11_2428 and Ac3H11_2429 are separated by 223 nucleotides Ac3H11_2426 - Enoyl-CoA hydratase (EC 4.2.1.17), at 684,484 to 685,329 _2426 Ac3H11_2427 - Threonine dehydratase, catabolic (EC 4.3.1.19), at 685,508 to 686,512 _2427 Ac3H11_2428 - Uracil phosphoribosyltransferase (EC 2.4.2.9), at 686,590 to 687,219 _2428 Ac3H11_2429 - Nucleoside ABC transporter, periplasmic nucleoside-binding protein, at 687,443 to 688,453 _2429 Position (kb) 685 686 687Strain fitness (log2 ratio) -2 -1 0 1at 684.522 kb on + strandat 684.523 kb on - strandat 684.880 kb on + strand, within Ac3H11_2426at 684.881 kb on - strand, within Ac3H11_2426at 685.000 kb on + strand, within Ac3H11_2426at 685.001 kb on - strand, within Ac3H11_2426at 685.001 kb on - strand, within Ac3H11_2426at 685.162 kb on + strand, within Ac3H11_2426at 685.707 kb on - strand, within Ac3H11_2427at 685.877 kb on + strand, within Ac3H11_2427at 685.898 kb on + strand, within Ac3H11_2427at 685.898 kb on + strand, within Ac3H11_2427at 685.898 kb on + strand, within Ac3H11_2427at 685.898 kb on + strand, within Ac3H11_2427at 685.898 kb on + strand, within Ac3H11_2427at 685.898 kb on + strand, within Ac3H11_2427at 685.898 kb on + strand, within Ac3H11_2427at 685.899 kb on - strand, within Ac3H11_2427at 685.899 kb on - strand, within Ac3H11_2427at 685.899 kb on - strand, within Ac3H11_2427at 685.899 kb on - strand, within Ac3H11_2427at 686.051 kb on + strand, within Ac3H11_2427at 686.051 kb on + strand, within Ac3H11_2427at 686.052 kb on - strand, within Ac3H11_2427at 686.261 kb on + strand, within Ac3H11_2427at 686.261 kb on + strand, within Ac3H11_2427at 686.262 kb on - strand, within Ac3H11_2427at 686.510 kb on + strandat 686.510 kb on + strandat 686.511 kb on - strandat 686.511 kb on - strandat 686.525 kb on + strandat 686.713 kb on + strand, within Ac3H11_2428at 686.713 kb on + strand, within Ac3H11_2428at 686.713 kb on + strand, within Ac3H11_2428at 686.714 kb on - strand, within Ac3H11_2428at 686.929 kb on + strand, within Ac3H11_2428at 686.929 kb on + strand, within Ac3H11_2428at 686.929 kb on + strand, within Ac3H11_2428at 686.929 kb on + strand, within Ac3H11_2428at 686.929 kb on + strand, within Ac3H11_2428at 686.930 kb on - strand, within Ac3H11_2428at 686.930 kb on - strand, within Ac3H11_2428at 686.932 kb on + strand, within Ac3H11_2428at 686.933 kb on - strand, within Ac3H11_2428at 686.933 kb on - strand, within Ac3H11_2428at 687.039 kb on + strand, within Ac3H11_2428at 687.166 kb on + strandat 687.167 kb on - strandat 687.167 kb on - strandat 687.167 kb on - strandat 687.167 kb on - strandat 687.167 kb on - strandat 687.217 kb on + strandat 687.217 kb on + strandat 687.217 kb on + strandat 687.218 kb on - strandat 687.218 kb on - strandat 687.375 kb on - strandat 687.375 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bacitracin 0.032 mg/ml
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684,522 + -0.3
684,523 - -1.8
684,880 + Ac3H11_2426 0.47 +0.3
684,881 - Ac3H11_2426 0.47 -1.0
685,000 + Ac3H11_2426 0.61 -1.4
685,001 - Ac3H11_2426 0.61 +0.9
685,001 - Ac3H11_2426 0.61 -1.3
685,162 + Ac3H11_2426 0.80 -0.4
685,707 - Ac3H11_2427 0.20 +0.6
685,877 + Ac3H11_2427 0.37 +0.6
685,898 + Ac3H11_2427 0.39 +1.1
685,898 + Ac3H11_2427 0.39 -0.3
685,898 + Ac3H11_2427 0.39 +0.2
685,898 + Ac3H11_2427 0.39 -0.2
685,898 + Ac3H11_2427 0.39 -0.8
685,898 + Ac3H11_2427 0.39 -0.2
685,898 + Ac3H11_2427 0.39 -1.2
685,899 - Ac3H11_2427 0.39 -0.1
685,899 - Ac3H11_2427 0.39 -0.3
685,899 - Ac3H11_2427 0.39 +0.1
685,899 - Ac3H11_2427 0.39 -0.8
686,051 + Ac3H11_2427 0.54 +0.8
686,051 + Ac3H11_2427 0.54 -0.2
686,052 - Ac3H11_2427 0.54 +0.2
686,261 + Ac3H11_2427 0.75 -0.5
686,261 + Ac3H11_2427 0.75 -1.6
686,262 - Ac3H11_2427 0.75 +0.3
686,510 + -1.0
686,510 + +1.3
686,511 - -1.2
686,511 - +0.2
686,525 + +1.5
686,713 + Ac3H11_2428 0.20 +1.2
686,713 + Ac3H11_2428 0.20 -0.4
686,713 + Ac3H11_2428 0.20 +0.8
686,714 - Ac3H11_2428 0.20 -0.0
686,929 + Ac3H11_2428 0.54 +0.5
686,929 + Ac3H11_2428 0.54 -1.1
686,929 + Ac3H11_2428 0.54 -1.7
686,929 + Ac3H11_2428 0.54 +1.0
686,929 + Ac3H11_2428 0.54 -0.3
686,930 - Ac3H11_2428 0.54 -0.2
686,930 - Ac3H11_2428 0.54 -1.6
686,932 + Ac3H11_2428 0.54 -1.1
686,933 - Ac3H11_2428 0.54 -1.4
686,933 - Ac3H11_2428 0.54 +0.1
687,039 + Ac3H11_2428 0.71 -0.0
687,166 + +0.0
687,167 - -0.6
687,167 - -0.6
687,167 - -1.2
687,167 - -0.0
687,167 - +0.3
687,217 + -0.4
687,217 + -0.8
687,217 + -1.8
687,218 - +1.0
687,218 - +0.1
687,375 - -0.3
687,375 - +0.1

Or see this region's nucleotide sequence