Experiment: Bacitracin 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1765 and Ac3H11_1766 are separated by 317 nucleotides Ac3H11_1766 and Ac3H11_1779 are separated by 94 nucleotides Ac3H11_1779 and Ac3H11_1767 are separated by 74 nucleotides
Ac3H11_1765 - Selenide,water dikinase (EC 2.7.9.3), at 378,553 to 379,605
_1765
Ac3H11_1766 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 379,923 to 381,038
_1766
Ac3H11_1779 - tRNA-Ser-CGA, at 381,133 to 381,219
_1779
Ac3H11_1767 - L-lactate dehydrogenase (EC 1.1.2.3), at 381,294 to 382,553
_1767
Position (kb) 379
380
381
382 Strain fitness (log2 ratio) -2
-1
0
1
2 at 379.068 kb on - strand, within Ac3H11_1765 at 379.313 kb on + strand, within Ac3H11_1765 at 379.313 kb on + strand, within Ac3H11_1765 at 379.313 kb on + strand, within Ac3H11_1765 at 379.314 kb on - strand, within Ac3H11_1765 at 379.314 kb on - strand, within Ac3H11_1765 at 379.314 kb on - strand, within Ac3H11_1765 at 379.314 kb on - strand, within Ac3H11_1765 at 379.314 kb on - strand, within Ac3H11_1765 at 379.427 kb on + strand, within Ac3H11_1765 at 379.428 kb on - strand, within Ac3H11_1765 at 379.428 kb on - strand, within Ac3H11_1765 at 379.428 kb on - strand, within Ac3H11_1765 at 379.559 kb on + strand at 379.560 kb on - strand at 379.605 kb on + strand at 379.605 kb on + strand at 379.605 kb on + strand at 379.605 kb on + strand at 379.605 kb on + strand at 379.605 kb on + strand at 379.605 kb on + strand at 379.605 kb on + strand at 379.606 kb on - strand at 379.606 kb on - strand at 379.606 kb on - strand at 379.606 kb on - strand at 379.606 kb on - strand at 379.606 kb on - strand at 379.734 kb on + strand at 379.736 kb on + strand at 379.736 kb on + strand at 379.750 kb on + strand at 379.750 kb on + strand at 379.750 kb on + strand at 379.751 kb on - strand at 379.751 kb on - strand at 379.751 kb on - strand at 379.751 kb on - strand at 379.751 kb on - strand at 379.980 kb on + strand at 380.052 kb on + strand, within Ac3H11_1766 at 380.052 kb on + strand, within Ac3H11_1766 at 380.053 kb on - strand, within Ac3H11_1766 at 380.053 kb on - strand, within Ac3H11_1766 at 380.154 kb on + strand, within Ac3H11_1766 at 380.154 kb on + strand, within Ac3H11_1766 at 380.155 kb on - strand, within Ac3H11_1766 at 380.155 kb on - strand, within Ac3H11_1766 at 380.155 kb on - strand, within Ac3H11_1766 at 380.463 kb on + strand, within Ac3H11_1766 at 380.463 kb on + strand, within Ac3H11_1766 at 380.463 kb on + strand, within Ac3H11_1766 at 380.464 kb on - strand, within Ac3H11_1766 at 380.464 kb on - strand, within Ac3H11_1766 at 380.550 kb on + strand, within Ac3H11_1766 at 380.550 kb on + strand, within Ac3H11_1766 at 380.551 kb on - strand, within Ac3H11_1766 at 380.640 kb on + strand, within Ac3H11_1766 at 380.994 kb on + strand at 380.995 kb on - strand at 381.044 kb on + strand at 381.044 kb on + strand at 381.045 kb on - strand at 381.045 kb on - strand at 381.045 kb on - strand at 381.437 kb on - strand, within Ac3H11_1767 at 381.437 kb on - strand, within Ac3H11_1767 at 381.437 kb on - strand, within Ac3H11_1767 at 381.972 kb on + strand, within Ac3H11_1767 at 381.972 kb on + strand, within Ac3H11_1767 at 381.972 kb on + strand, within Ac3H11_1767 at 381.972 kb on + strand, within Ac3H11_1767 at 381.972 kb on + strand, within Ac3H11_1767 at 381.972 kb on + strand, within Ac3H11_1767 at 381.973 kb on - strand, within Ac3H11_1767 at 381.973 kb on - strand, within Ac3H11_1767
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.032 mg/ml remove 379,068 - Ac3H11_1765 0.49 +1.0 379,313 + Ac3H11_1765 0.72 +0.2 379,313 + Ac3H11_1765 0.72 +0.3 379,313 + Ac3H11_1765 0.72 +2.3 379,314 - Ac3H11_1765 0.72 -0.9 379,314 - Ac3H11_1765 0.72 -0.1 379,314 - Ac3H11_1765 0.72 +0.6 379,314 - Ac3H11_1765 0.72 -1.5 379,314 - Ac3H11_1765 0.72 +0.5 379,427 + Ac3H11_1765 0.83 +1.8 379,428 - Ac3H11_1765 0.83 -2.1 379,428 - Ac3H11_1765 0.83 -0.7 379,428 - Ac3H11_1765 0.83 -1.5 379,559 + -0.0 379,560 - +1.2 379,605 + -0.6 379,605 + -1.9 379,605 + -0.6 379,605 + +0.7 379,605 + -1.5 379,605 + -0.0 379,605 + -0.3 379,605 + +0.5 379,606 - -0.1 379,606 - -0.4 379,606 - +1.9 379,606 - +0.5 379,606 - +0.8 379,606 - +0.4 379,734 + +0.5 379,736 + -0.6 379,736 + -2.4 379,750 + -1.5 379,750 + -1.5 379,750 + -0.0 379,751 - +0.8 379,751 - +1.1 379,751 - +0.4 379,751 - +0.2 379,751 - +0.3 379,980 + -1.5 380,052 + Ac3H11_1766 0.12 +2.1 380,052 + Ac3H11_1766 0.12 -2.0 380,053 - Ac3H11_1766 0.12 +0.3 380,053 - Ac3H11_1766 0.12 -0.1 380,154 + Ac3H11_1766 0.21 -2.3 380,154 + Ac3H11_1766 0.21 -2.4 380,155 - Ac3H11_1766 0.21 -0.2 380,155 - Ac3H11_1766 0.21 -0.1 380,155 - Ac3H11_1766 0.21 -0.1 380,463 + Ac3H11_1766 0.48 -0.5 380,463 + Ac3H11_1766 0.48 +0.3 380,463 + Ac3H11_1766 0.48 +1.1 380,464 - Ac3H11_1766 0.48 -0.1 380,464 - Ac3H11_1766 0.48 -1.3 380,550 + Ac3H11_1766 0.56 -0.5 380,550 + Ac3H11_1766 0.56 -0.6 380,551 - Ac3H11_1766 0.56 +1.5 380,640 + Ac3H11_1766 0.64 +0.9 380,994 + -0.6 380,995 - +1.1 381,044 + +1.0 381,044 + +1.1 381,045 - +1.0 381,045 - -0.3 381,045 - +0.1 381,437 - Ac3H11_1767 0.11 +0.6 381,437 - Ac3H11_1767 0.11 +0.8 381,437 - Ac3H11_1767 0.11 +0.5 381,972 + Ac3H11_1767 0.54 -0.3 381,972 + Ac3H11_1767 0.54 +0.1 381,972 + Ac3H11_1767 0.54 -1.6 381,972 + Ac3H11_1767 0.54 -0.4 381,972 + Ac3H11_1767 0.54 -0.2 381,972 + Ac3H11_1767 0.54 +1.4 381,973 - Ac3H11_1767 0.54 -0.8 381,973 - Ac3H11_1767 0.54 -1.5
Or see this region's nucleotide sequence