Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_29110 and AO353_29115 are separated by 55 nucleotides AO353_29115 and AO353_29120 are separated by 165 nucleotides AO353_29120 and AO353_29125 overlap by 4 nucleotides
AO353_29110: AO353_29110 - FAD-dependent oxidoreductase, at 6,325,090 to 6,326,400
_29110
AO353_29115: AO353_29115 - enamine deaminase RidA, at 6,326,456 to 6,326,872
_29115
AO353_29120: AO353_29120 - fimbrial assembly protein FimA, at 6,327,038 to 6,327,715
_29120
AO353_29125: AO353_29125 - acetylornithine deacetylase, at 6,327,712 to 6,328,860
_29125
Position (kb)
6326
6327 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6325.649 kb on + strand, within AO353_29110 at 6325.649 kb on + strand, within AO353_29110 at 6325.650 kb on - strand, within AO353_29110 at 6325.650 kb on - strand, within AO353_29110 at 6325.650 kb on - strand, within AO353_29110 at 6325.672 kb on + strand, within AO353_29110 at 6325.672 kb on + strand, within AO353_29110 at 6325.672 kb on + strand, within AO353_29110 at 6325.672 kb on + strand, within AO353_29110 at 6325.673 kb on - strand, within AO353_29110 at 6325.673 kb on - strand, within AO353_29110 at 6325.805 kb on + strand, within AO353_29110 at 6325.827 kb on + strand, within AO353_29110 at 6325.827 kb on + strand, within AO353_29110 at 6325.828 kb on - strand, within AO353_29110 at 6325.828 kb on - strand, within AO353_29110 at 6325.954 kb on + strand, within AO353_29110 at 6325.954 kb on + strand, within AO353_29110 at 6325.954 kb on + strand, within AO353_29110 at 6325.954 kb on + strand, within AO353_29110 at 6325.954 kb on + strand, within AO353_29110 at 6325.955 kb on - strand, within AO353_29110 at 6325.955 kb on - strand, within AO353_29110 at 6325.955 kb on - strand, within AO353_29110 at 6325.955 kb on - strand, within AO353_29110 at 6325.955 kb on - strand, within AO353_29110 at 6325.984 kb on + strand, within AO353_29110 at 6325.984 kb on + strand, within AO353_29110 at 6325.984 kb on + strand, within AO353_29110 at 6326.034 kb on + strand, within AO353_29110 at 6326.034 kb on + strand, within AO353_29110 at 6326.035 kb on - strand, within AO353_29110 at 6326.035 kb on - strand, within AO353_29110 at 6326.035 kb on - strand, within AO353_29110 at 6326.138 kb on - strand, within AO353_29110 at 6326.199 kb on - strand, within AO353_29110 at 6326.218 kb on + strand, within AO353_29110 at 6326.218 kb on + strand, within AO353_29110 at 6326.219 kb on - strand, within AO353_29110 at 6326.219 kb on - strand, within AO353_29110 at 6326.219 kb on - strand, within AO353_29110 at 6326.219 kb on - strand, within AO353_29110 at 6326.263 kb on - strand, within AO353_29110 at 6326.263 kb on - strand, within AO353_29110 at 6326.290 kb on + strand at 6326.290 kb on + strand at 6326.290 kb on + strand at 6326.291 kb on - strand at 6326.291 kb on - strand at 6326.291 kb on - strand at 6326.379 kb on + strand at 6326.379 kb on + strand at 6326.379 kb on + strand at 6326.564 kb on + strand, within AO353_29115 at 6326.565 kb on + strand, within AO353_29115 at 6326.565 kb on + strand, within AO353_29115 at 6326.565 kb on + strand, within AO353_29115 at 6326.565 kb on + strand, within AO353_29115 at 6326.565 kb on + strand, within AO353_29115 at 6326.565 kb on + strand, within AO353_29115 at 6326.565 kb on + strand, within AO353_29115 at 6326.565 kb on + strand, within AO353_29115 at 6326.565 kb on + strand, within AO353_29115 at 6326.565 kb on + strand, within AO353_29115 at 6326.565 kb on + strand, within AO353_29115 at 6326.565 kb on + strand, within AO353_29115 at 6326.565 kb on + strand, within AO353_29115 at 6326.566 kb on - strand, within AO353_29115 at 6326.566 kb on - strand, within AO353_29115 at 6326.566 kb on - strand, within AO353_29115 at 6326.566 kb on - strand, within AO353_29115 at 6326.566 kb on - strand, within AO353_29115 at 6326.566 kb on - strand, within AO353_29115 at 6326.566 kb on - strand, within AO353_29115 at 6326.566 kb on - strand, within AO353_29115 at 6326.566 kb on - strand, within AO353_29115 at 6326.566 kb on - strand, within AO353_29115 at 6326.566 kb on - strand, within AO353_29115 at 6326.566 kb on - strand, within AO353_29115 at 6326.567 kb on + strand, within AO353_29115 at 6326.567 kb on + strand, within AO353_29115 at 6326.567 kb on + strand, within AO353_29115 at 6326.567 kb on + strand, within AO353_29115 at 6326.567 kb on + strand, within AO353_29115 at 6326.567 kb on + strand, within AO353_29115 at 6326.567 kb on + strand, within AO353_29115 at 6326.567 kb on + strand, within AO353_29115 at 6326.568 kb on - strand, within AO353_29115 at 6326.568 kb on - strand, within AO353_29115 at 6326.568 kb on - strand, within AO353_29115 at 6326.568 kb on - strand, within AO353_29115 at 6326.568 kb on - strand, within AO353_29115 at 6326.568 kb on - strand, within AO353_29115 at 6326.717 kb on + strand, within AO353_29115 at 6326.717 kb on + strand, within AO353_29115 at 6326.717 kb on + strand, within AO353_29115 at 6326.717 kb on + strand, within AO353_29115 at 6326.717 kb on + strand, within AO353_29115 at 6326.717 kb on + strand, within AO353_29115 at 6326.717 kb on + strand, within AO353_29115 at 6326.717 kb on + strand, within AO353_29115 at 6326.717 kb on + strand, within AO353_29115 at 6326.717 kb on + strand, within AO353_29115 at 6326.717 kb on + strand, within AO353_29115 at 6326.718 kb on - strand, within AO353_29115 at 6326.718 kb on - strand, within AO353_29115 at 6326.718 kb on - strand, within AO353_29115 at 6326.718 kb on - strand, within AO353_29115 at 6326.751 kb on - strand, within AO353_29115 at 6326.881 kb on - strand at 6326.916 kb on + strand at 6326.916 kb on + strand at 6326.917 kb on - strand at 6327.267 kb on - strand, within AO353_29120 at 6327.418 kb on - strand, within AO353_29120 at 6327.651 kb on - strand at 6327.651 kb on - strand at 6327.651 kb on - strand at 6327.805 kb on + strand at 6327.805 kb on + strand at 6327.806 kb on - strand at 6327.841 kb on + strand, within AO353_29125 at 6327.841 kb on + strand, within AO353_29125 at 6327.841 kb on + strand, within AO353_29125 at 6327.841 kb on + strand, within AO353_29125 at 6327.842 kb on - strand, within AO353_29125 at 6327.842 kb on - strand, within AO353_29125 at 6327.842 kb on - strand, within AO353_29125 at 6327.842 kb on - strand, within AO353_29125 at 6327.842 kb on - strand, within AO353_29125
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 6,325,649 + AO353_29110 0.43 +0.2 6,325,649 + AO353_29110 0.43 -0.6 6,325,650 - AO353_29110 0.43 +0.6 6,325,650 - AO353_29110 0.43 -0.4 6,325,650 - AO353_29110 0.43 -1.1 6,325,672 + AO353_29110 0.44 -2.4 6,325,672 + AO353_29110 0.44 -1.4 6,325,672 + AO353_29110 0.44 +0.3 6,325,672 + AO353_29110 0.44 -1.4 6,325,673 - AO353_29110 0.44 -0.4 6,325,673 - AO353_29110 0.44 +0.4 6,325,805 + AO353_29110 0.55 -1.1 6,325,827 + AO353_29110 0.56 +0.2 6,325,827 + AO353_29110 0.56 -1.7 6,325,828 - AO353_29110 0.56 +0.6 6,325,828 - AO353_29110 0.56 +1.1 6,325,954 + AO353_29110 0.66 -0.9 6,325,954 + AO353_29110 0.66 -1.4 6,325,954 + AO353_29110 0.66 -0.8 6,325,954 + AO353_29110 0.66 -1.0 6,325,954 + AO353_29110 0.66 -0.4 6,325,955 - AO353_29110 0.66 -0.4 6,325,955 - AO353_29110 0.66 +0.1 6,325,955 - AO353_29110 0.66 -0.4 6,325,955 - AO353_29110 0.66 -2.2 6,325,955 - AO353_29110 0.66 -0.2 6,325,984 + AO353_29110 0.68 +0.2 6,325,984 + AO353_29110 0.68 -1.4 6,325,984 + AO353_29110 0.68 -1.2 6,326,034 + AO353_29110 0.72 +0.3 6,326,034 + AO353_29110 0.72 -0.4 6,326,035 - AO353_29110 0.72 +0.8 6,326,035 - AO353_29110 0.72 +0.5 6,326,035 - AO353_29110 0.72 +1.4 6,326,138 - AO353_29110 0.80 -1.2 6,326,199 - AO353_29110 0.85 -0.4 6,326,218 + AO353_29110 0.86 -1.4 6,326,218 + AO353_29110 0.86 -0.6 6,326,219 - AO353_29110 0.86 +0.0 6,326,219 - AO353_29110 0.86 +1.4 6,326,219 - AO353_29110 0.86 -1.0 6,326,219 - AO353_29110 0.86 +1.6 6,326,263 - AO353_29110 0.89 +0.8 6,326,263 - AO353_29110 0.89 +0.3 6,326,290 + +0.6 6,326,290 + +0.6 6,326,290 + -0.1 6,326,291 - -1.2 6,326,291 - -1.0 6,326,291 - +0.5 6,326,379 + +0.9 6,326,379 + -1.1 6,326,379 + -0.5 6,326,564 + AO353_29115 0.26 -0.2 6,326,565 + AO353_29115 0.26 -0.5 6,326,565 + AO353_29115 0.26 -0.8 6,326,565 + AO353_29115 0.26 -0.2 6,326,565 + AO353_29115 0.26 -0.4 6,326,565 + AO353_29115 0.26 -1.4 6,326,565 + AO353_29115 0.26 +0.0 6,326,565 + AO353_29115 0.26 +0.9 6,326,565 + AO353_29115 0.26 -0.4 6,326,565 + AO353_29115 0.26 +0.9 6,326,565 + AO353_29115 0.26 +0.6 6,326,565 + AO353_29115 0.26 -0.4 6,326,565 + AO353_29115 0.26 +0.6 6,326,565 + AO353_29115 0.26 -0.4 6,326,566 - AO353_29115 0.26 -0.4 6,326,566 - AO353_29115 0.26 -0.8 6,326,566 - AO353_29115 0.26 -0.7 6,326,566 - AO353_29115 0.26 -0.4 6,326,566 - AO353_29115 0.26 +2.6 6,326,566 - AO353_29115 0.26 +1.6 6,326,566 - AO353_29115 0.26 -2.0 6,326,566 - AO353_29115 0.26 -1.4 6,326,566 - AO353_29115 0.26 +0.1 6,326,566 - AO353_29115 0.26 +2.2 6,326,566 - AO353_29115 0.26 -1.6 6,326,566 - AO353_29115 0.26 +0.0 6,326,567 + AO353_29115 0.27 +0.2 6,326,567 + AO353_29115 0.27 -0.4 6,326,567 + AO353_29115 0.27 -1.0 6,326,567 + AO353_29115 0.27 +0.1 6,326,567 + AO353_29115 0.27 +0.2 6,326,567 + AO353_29115 0.27 -1.5 6,326,567 + AO353_29115 0.27 +0.4 6,326,567 + AO353_29115 0.27 +1.9 6,326,568 - AO353_29115 0.27 -1.4 6,326,568 - AO353_29115 0.27 +0.2 6,326,568 - AO353_29115 0.27 +1.2 6,326,568 - AO353_29115 0.27 +1.2 6,326,568 - AO353_29115 0.27 -2.7 6,326,568 - AO353_29115 0.27 +0.0 6,326,717 + AO353_29115 0.63 -0.6 6,326,717 + AO353_29115 0.63 -1.4 6,326,717 + AO353_29115 0.63 -0.4 6,326,717 + AO353_29115 0.63 -0.4 6,326,717 + AO353_29115 0.63 -1.4 6,326,717 + AO353_29115 0.63 -1.0 6,326,717 + AO353_29115 0.63 +1.2 6,326,717 + AO353_29115 0.63 +0.4 6,326,717 + AO353_29115 0.63 -0.4 6,326,717 + AO353_29115 0.63 +0.9 6,326,717 + AO353_29115 0.63 +0.6 6,326,718 - AO353_29115 0.63 -1.4 6,326,718 - AO353_29115 0.63 +0.6 6,326,718 - AO353_29115 0.63 +0.2 6,326,718 - AO353_29115 0.63 -0.8 6,326,751 - AO353_29115 0.71 +0.8 6,326,881 - +0.2 6,326,916 + +0.0 6,326,916 + -1.1 6,326,917 - -2.0 6,327,267 - AO353_29120 0.34 -1.0 6,327,418 - AO353_29120 0.56 -1.4 6,327,651 - +1.2 6,327,651 - -2.5 6,327,651 - +1.9 6,327,805 + -0.4 6,327,805 + +0.4 6,327,806 - -1.4 6,327,841 + AO353_29125 0.11 +1.9 6,327,841 + AO353_29125 0.11 +0.2 6,327,841 + AO353_29125 0.11 +0.2 6,327,841 + AO353_29125 0.11 -1.7 6,327,842 - AO353_29125 0.11 +0.9 6,327,842 - AO353_29125 0.11 -1.4 6,327,842 - AO353_29125 0.11 +1.2 6,327,842 - AO353_29125 0.11 -1.1 6,327,842 - AO353_29125 0.11 +0.5
Or see this region's nucleotide sequence