Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_25295 and AO353_25300 are separated by 789 nucleotides AO353_25300 and AO353_25305 are separated by 137 nucleotides AO353_25305 and AO353_25310 are separated by 1 nucleotides
AO353_25295: AO353_25295 - hypothetical protein, at 5,580,006 to 5,581,415
_25295
AO353_25300: AO353_25300 - LysR family transcriptional regulator, at 5,582,205 to 5,583,119
_25300
AO353_25305: AO353_25305 - malonate transporter, at 5,583,257 to 5,584,021
_25305
AO353_25310: AO353_25310 - malonate carrier protein, at 5,584,023 to 5,584,439
_25310
Position (kb)
5582
5583
5584 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5581.249 kb on + strand, within AO353_25295 at 5581.251 kb on + strand, within AO353_25295 at 5581.251 kb on + strand, within AO353_25295 at 5581.251 kb on + strand, within AO353_25295 at 5581.251 kb on + strand, within AO353_25295 at 5581.251 kb on + strand, within AO353_25295 at 5581.358 kb on - strand at 5581.387 kb on + strand at 5581.416 kb on - strand at 5581.484 kb on - strand at 5581.550 kb on + strand at 5581.641 kb on + strand at 5581.642 kb on - strand at 5581.741 kb on + strand at 5581.769 kb on + strand at 5581.830 kb on - strand at 5581.839 kb on - strand at 5581.947 kb on + strand at 5581.948 kb on - strand at 5581.995 kb on + strand at 5582.017 kb on + strand at 5582.057 kb on + strand at 5582.057 kb on + strand at 5582.175 kb on + strand at 5582.176 kb on - strand at 5582.176 kb on - strand at 5582.406 kb on + strand, within AO353_25300 at 5582.406 kb on + strand, within AO353_25300 at 5582.407 kb on - strand, within AO353_25300 at 5582.407 kb on - strand, within AO353_25300 at 5582.407 kb on - strand, within AO353_25300 at 5582.407 kb on - strand, within AO353_25300 at 5582.410 kb on + strand, within AO353_25300 at 5582.410 kb on + strand, within AO353_25300 at 5582.411 kb on - strand, within AO353_25300 at 5582.411 kb on - strand, within AO353_25300 at 5582.411 kb on - strand, within AO353_25300 at 5582.458 kb on + strand, within AO353_25300 at 5582.518 kb on - strand, within AO353_25300 at 5582.518 kb on - strand, within AO353_25300 at 5582.622 kb on + strand, within AO353_25300 at 5582.622 kb on + strand, within AO353_25300 at 5582.622 kb on + strand, within AO353_25300 at 5582.622 kb on + strand, within AO353_25300 at 5582.623 kb on - strand, within AO353_25300 at 5582.623 kb on - strand, within AO353_25300 at 5582.623 kb on - strand, within AO353_25300 at 5582.970 kb on + strand, within AO353_25300 at 5583.099 kb on + strand at 5583.099 kb on + strand at 5583.099 kb on + strand at 5583.100 kb on - strand at 5583.100 kb on - strand at 5583.100 kb on - strand at 5583.100 kb on - strand at 5583.100 kb on - strand at 5583.100 kb on - strand at 5583.100 kb on - strand at 5583.165 kb on + strand at 5583.165 kb on + strand at 5583.165 kb on + strand at 5583.165 kb on + strand at 5583.166 kb on - strand at 5583.166 kb on - strand at 5583.166 kb on - strand at 5583.190 kb on + strand at 5583.259 kb on - strand at 5583.285 kb on + strand at 5583.579 kb on + strand, within AO353_25305 at 5583.579 kb on + strand, within AO353_25305 at 5583.579 kb on + strand, within AO353_25305 at 5583.580 kb on - strand, within AO353_25305 at 5583.580 kb on - strand, within AO353_25305 at 5583.580 kb on - strand, within AO353_25305 at 5583.580 kb on - strand, within AO353_25305 at 5583.580 kb on - strand, within AO353_25305 at 5583.580 kb on - strand, within AO353_25305 at 5583.662 kb on - strand, within AO353_25305 at 5583.662 kb on - strand, within AO353_25305 at 5583.662 kb on - strand, within AO353_25305 at 5584.021 kb on + strand at 5584.021 kb on + strand at 5584.022 kb on - strand at 5584.022 kb on - strand at 5584.022 kb on - strand at 5584.022 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 5,581,249 + AO353_25295 0.88 -1.1 5,581,251 + AO353_25295 0.88 -0.2 5,581,251 + AO353_25295 0.88 -0.2 5,581,251 + AO353_25295 0.88 -0.0 5,581,251 + AO353_25295 0.88 +0.2 5,581,251 + AO353_25295 0.88 -0.6 5,581,358 - +0.4 5,581,387 + -2.1 5,581,416 - +1.1 5,581,484 - -0.6 5,581,550 + +0.4 5,581,641 + -0.1 5,581,642 - -1.1 5,581,741 + -1.6 5,581,769 + +0.3 5,581,830 - -1.1 5,581,839 - +1.2 5,581,947 + -0.0 5,581,948 - -0.6 5,581,995 + -0.3 5,582,017 + -0.6 5,582,057 + +1.0 5,582,057 + -1.1 5,582,175 + +0.2 5,582,176 - -1.1 5,582,176 - +0.0 5,582,406 + AO353_25300 0.22 -0.6 5,582,406 + AO353_25300 0.22 +0.2 5,582,407 - AO353_25300 0.22 +1.4 5,582,407 - AO353_25300 0.22 +0.4 5,582,407 - AO353_25300 0.22 -0.2 5,582,407 - AO353_25300 0.22 +1.4 5,582,410 + AO353_25300 0.22 +2.0 5,582,410 + AO353_25300 0.22 -0.6 5,582,411 - AO353_25300 0.23 -1.3 5,582,411 - AO353_25300 0.23 -1.6 5,582,411 - AO353_25300 0.23 -0.4 5,582,458 + AO353_25300 0.28 +1.2 5,582,518 - AO353_25300 0.34 +1.0 5,582,518 - AO353_25300 0.34 -0.8 5,582,622 + AO353_25300 0.46 -0.8 5,582,622 + AO353_25300 0.46 +0.1 5,582,622 + AO353_25300 0.46 +0.0 5,582,622 + AO353_25300 0.46 -0.6 5,582,623 - AO353_25300 0.46 +0.2 5,582,623 - AO353_25300 0.46 -0.1 5,582,623 - AO353_25300 0.46 +0.4 5,582,970 + AO353_25300 0.84 -1.3 5,583,099 + -0.6 5,583,099 + +0.2 5,583,099 + +1.4 5,583,100 - -1.6 5,583,100 - +0.4 5,583,100 - +0.8 5,583,100 - -1.6 5,583,100 - +0.6 5,583,100 - -1.1 5,583,100 - +0.0 5,583,165 + +0.4 5,583,165 + -0.8 5,583,165 + -0.6 5,583,165 + +1.4 5,583,166 - +0.8 5,583,166 - -0.7 5,583,166 - -0.1 5,583,190 + +0.2 5,583,259 - +0.3 5,583,285 + +0.6 5,583,579 + AO353_25305 0.42 -0.6 5,583,579 + AO353_25305 0.42 +1.6 5,583,579 + AO353_25305 0.42 -1.0 5,583,580 - AO353_25305 0.42 +0.0 5,583,580 - AO353_25305 0.42 -0.9 5,583,580 - AO353_25305 0.42 +0.8 5,583,580 - AO353_25305 0.42 -0.6 5,583,580 - AO353_25305 0.42 +0.3 5,583,580 - AO353_25305 0.42 +0.0 5,583,662 - AO353_25305 0.53 +0.3 5,583,662 - AO353_25305 0.53 -0.9 5,583,662 - AO353_25305 0.53 -0.6 5,584,021 + -1.3 5,584,021 + +0.4 5,584,022 - -1.6 5,584,022 - +1.6 5,584,022 - +0.4 5,584,022 - +0.0
Or see this region's nucleotide sequence