Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_16160

Experiment: L-Glutamine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_16150 and AO353_16155 are separated by 40 nucleotidesAO353_16155 and AO353_16160 are separated by 57 nucleotidesAO353_16160 and AO353_16165 are separated by 398 nucleotides AO353_16150: AO353_16150 - hypothetical protein, at 3,581,383 to 3,583,011 _16150 AO353_16155: AO353_16155 - antibiotic biosynthesis monooxygenase, at 3,583,052 to 3,583,336 _16155 AO353_16160: AO353_16160 - glutamate synthase, at 3,583,394 to 3,585,010 _16160 AO353_16165: AO353_16165 - ATPase, at 3,585,409 to 3,586,815 _16165 Position (kb) 3583 3584 3585 3586Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3582.450 kb on + strand, within AO353_16150at 3582.450 kb on + strand, within AO353_16150at 3582.450 kb on + strand, within AO353_16150at 3582.450 kb on + strand, within AO353_16150at 3582.451 kb on - strand, within AO353_16150at 3582.451 kb on - strand, within AO353_16150at 3582.451 kb on - strand, within AO353_16150at 3582.451 kb on - strand, within AO353_16150at 3582.457 kb on + strand, within AO353_16150at 3582.457 kb on + strand, within AO353_16150at 3582.457 kb on + strand, within AO353_16150at 3582.457 kb on + strand, within AO353_16150at 3582.457 kb on + strand, within AO353_16150at 3582.457 kb on + strand, within AO353_16150at 3582.457 kb on + strand, within AO353_16150at 3582.457 kb on + strand, within AO353_16150at 3582.457 kb on + strand, within AO353_16150at 3582.457 kb on + strand, within AO353_16150at 3582.457 kb on + strand, within AO353_16150at 3582.458 kb on - strand, within AO353_16150at 3582.458 kb on - strand, within AO353_16150at 3582.458 kb on - strand, within AO353_16150at 3582.458 kb on - strand, within AO353_16150at 3582.528 kb on + strand, within AO353_16150at 3582.529 kb on - strand, within AO353_16150at 3582.577 kb on + strand, within AO353_16150at 3582.584 kb on - strand, within AO353_16150at 3582.586 kb on + strand, within AO353_16150at 3582.586 kb on + strand, within AO353_16150at 3582.586 kb on + strand, within AO353_16150at 3582.586 kb on + strand, within AO353_16150at 3582.586 kb on + strand, within AO353_16150at 3582.598 kb on + strand, within AO353_16150at 3582.598 kb on + strand, within AO353_16150at 3582.598 kb on + strand, within AO353_16150at 3582.599 kb on - strand, within AO353_16150at 3582.601 kb on + strand, within AO353_16150at 3582.601 kb on + strand, within AO353_16150at 3582.601 kb on + strand, within AO353_16150at 3582.601 kb on + strand, within AO353_16150at 3582.601 kb on + strand, within AO353_16150at 3582.602 kb on - strand, within AO353_16150at 3582.602 kb on - strand, within AO353_16150at 3582.602 kb on - strand, within AO353_16150at 3582.602 kb on - strand, within AO353_16150at 3582.602 kb on - strand, within AO353_16150at 3582.632 kb on - strand, within AO353_16150at 3582.677 kb on - strand, within AO353_16150at 3582.697 kb on + strand, within AO353_16150at 3582.697 kb on + strand, within AO353_16150at 3582.698 kb on - strand, within AO353_16150at 3582.698 kb on - strand, within AO353_16150at 3582.698 kb on - strand, within AO353_16150at 3582.698 kb on - strand, within AO353_16150at 3582.698 kb on - strand, within AO353_16150at 3582.740 kb on + strand, within AO353_16150at 3582.741 kb on - strand, within AO353_16150at 3582.741 kb on - strand, within AO353_16150at 3582.865 kb on + strandat 3582.865 kb on + strandat 3582.865 kb on + strandat 3582.865 kb on + strandat 3582.865 kb on + strandat 3582.865 kb on + strandat 3582.865 kb on + strandat 3582.865 kb on + strandat 3582.866 kb on - strandat 3582.866 kb on - strandat 3582.866 kb on - strandat 3582.866 kb on - strandat 3582.866 kb on - strandat 3582.953 kb on - strandat 3582.953 kb on - strandat 3582.959 kb on + strandat 3582.959 kb on + strandat 3582.960 kb on - strandat 3582.960 kb on - strandat 3583.013 kb on + strandat 3583.013 kb on + strandat 3583.013 kb on + strandat 3583.013 kb on + strandat 3583.013 kb on + strandat 3583.014 kb on - strandat 3583.014 kb on - strandat 3583.014 kb on - strandat 3583.038 kb on + strandat 3583.038 kb on + strandat 3583.038 kb on + strandat 3583.038 kb on + strandat 3583.038 kb on + strandat 3583.038 kb on + strandat 3583.039 kb on - strandat 3583.039 kb on - strandat 3583.039 kb on - strandat 3583.039 kb on - strandat 3583.039 kb on - strandat 3583.096 kb on - strand, within AO353_16155at 3583.225 kb on - strand, within AO353_16155at 3583.272 kb on + strand, within AO353_16155at 3583.272 kb on + strand, within AO353_16155at 3583.273 kb on - strand, within AO353_16155at 3583.273 kb on - strand, within AO353_16155at 3583.294 kb on + strand, within AO353_16155at 3583.326 kb on - strandat 3583.326 kb on - strandat 3583.326 kb on - strandat 3583.382 kb on + strandat 3583.382 kb on + strandat 3583.383 kb on - strandat 3583.389 kb on + strandat 3583.389 kb on + strandat 3583.389 kb on + strandat 3583.389 kb on + strandat 3583.389 kb on + strandat 3583.390 kb on - strandat 3583.390 kb on - strandat 3583.423 kb on + strandat 3583.424 kb on - strandat 3583.455 kb on + strandat 3583.455 kb on + strandat 3583.455 kb on + strandat 3583.456 kb on - strandat 3583.456 kb on - strandat 3583.456 kb on - strandat 3583.456 kb on - strandat 3583.456 kb on - strandat 3583.456 kb on - strandat 3583.554 kb on - strandat 3583.900 kb on + strand, within AO353_16160at 3583.900 kb on + strand, within AO353_16160at 3583.900 kb on + strand, within AO353_16160at 3583.900 kb on + strand, within AO353_16160at 3583.901 kb on - strand, within AO353_16160at 3583.901 kb on - strand, within AO353_16160at 3583.901 kb on - strand, within AO353_16160at 3584.228 kb on + strand, within AO353_16160at 3584.230 kb on + strand, within AO353_16160at 3584.230 kb on + strand, within AO353_16160at 3584.230 kb on + strand, within AO353_16160at 3584.230 kb on + strand, within AO353_16160at 3584.230 kb on + strand, within AO353_16160at 3584.230 kb on + strand, within AO353_16160at 3584.230 kb on + strand, within AO353_16160at 3584.231 kb on - strand, within AO353_16160at 3584.231 kb on - strand, within AO353_16160at 3584.231 kb on - strand, within AO353_16160at 3584.231 kb on - strand, within AO353_16160at 3584.297 kb on + strand, within AO353_16160at 3584.297 kb on + strand, within AO353_16160at 3584.298 kb on - strand, within AO353_16160at 3584.370 kb on + strand, within AO353_16160at 3584.370 kb on + strand, within AO353_16160at 3584.418 kb on + strand, within AO353_16160at 3584.551 kb on - strand, within AO353_16160at 3584.551 kb on - strand, within AO353_16160at 3584.560 kb on + strand, within AO353_16160at 3584.560 kb on + strand, within AO353_16160at 3584.561 kb on - strand, within AO353_16160at 3584.561 kb on - strand, within AO353_16160at 3584.561 kb on - strand, within AO353_16160at 3584.655 kb on + strand, within AO353_16160at 3584.656 kb on - strand, within AO353_16160at 3584.773 kb on - strand, within AO353_16160at 3584.809 kb on - strand, within AO353_16160at 3584.815 kb on + strand, within AO353_16160at 3584.833 kb on - strand, within AO353_16160at 3584.876 kb on - strandat 3584.876 kb on - strandat 3584.928 kb on + strandat 3584.929 kb on - strandat 3584.929 kb on - strandat 3584.929 kb on - strandat 3585.011 kb on - strandat 3585.033 kb on + strandat 3585.033 kb on + strandat 3585.033 kb on + strandat 3585.033 kb on + strandat 3585.034 kb on - strandat 3585.034 kb on - strandat 3585.034 kb on - strandat 3585.034 kb on - strandat 3585.034 kb on - strandat 3585.041 kb on - strandat 3585.051 kb on + strandat 3585.051 kb on + strandat 3585.051 kb on + strandat 3585.052 kb on - strandat 3585.052 kb on - strandat 3585.052 kb on - strandat 3585.052 kb on - strandat 3585.052 kb on - strandat 3585.052 kb on - strandat 3585.129 kb on + strandat 3585.129 kb on + strandat 3585.129 kb on + strandat 3585.130 kb on - strandat 3585.300 kb on + strandat 3585.300 kb on + strandat 3585.300 kb on + strandat 3585.300 kb on + strandat 3585.301 kb on - strandat 3585.350 kb on - strandat 3585.439 kb on + strandat 3585.487 kb on - strandat 3585.518 kb on + strandat 3585.518 kb on + strandat 3585.519 kb on - strandat 3585.519 kb on - strandat 3585.535 kb on + strandat 3585.780 kb on - strand, within AO353_16165at 3585.803 kb on + strand, within AO353_16165at 3585.803 kb on + strand, within AO353_16165at 3585.803 kb on + strand, within AO353_16165at 3585.803 kb on + strand, within AO353_16165at 3585.804 kb on - strand, within AO353_16165at 3585.886 kb on + strand, within AO353_16165at 3585.886 kb on + strand, within AO353_16165at 3585.969 kb on + strand, within AO353_16165at 3585.970 kb on - strand, within AO353_16165at 3585.970 kb on - strand, within AO353_16165at 3586.003 kb on - strand, within AO353_16165at 3586.003 kb on - strand, within AO353_16165

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (C)
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3,582,450 + AO353_16150 0.66 -1.9
3,582,450 + AO353_16150 0.66 -0.4
3,582,450 + AO353_16150 0.66 -2.4
3,582,450 + AO353_16150 0.66 -0.5
3,582,451 - AO353_16150 0.66 -0.3
3,582,451 - AO353_16150 0.66 +0.3
3,582,451 - AO353_16150 0.66 +0.6
3,582,451 - AO353_16150 0.66 -3.2
3,582,457 + AO353_16150 0.66 -0.7
3,582,457 + AO353_16150 0.66 +0.4
3,582,457 + AO353_16150 0.66 +1.0
3,582,457 + AO353_16150 0.66 -0.3
3,582,457 + AO353_16150 0.66 +2.7
3,582,457 + AO353_16150 0.66 +1.9
3,582,457 + AO353_16150 0.66 +0.4
3,582,457 + AO353_16150 0.66 +0.6
3,582,457 + AO353_16150 0.66 +0.1
3,582,457 + AO353_16150 0.66 +1.4
3,582,457 + AO353_16150 0.66 +1.1
3,582,458 - AO353_16150 0.66 +0.4
3,582,458 - AO353_16150 0.66 -0.2
3,582,458 - AO353_16150 0.66 -0.6
3,582,458 - AO353_16150 0.66 +1.1
3,582,528 + AO353_16150 0.70 -1.0
3,582,529 - AO353_16150 0.70 +0.1
3,582,577 + AO353_16150 0.73 -0.5
3,582,584 - AO353_16150 0.74 +1.7
3,582,586 + AO353_16150 0.74 +0.5
3,582,586 + AO353_16150 0.74 +1.5
3,582,586 + AO353_16150 0.74 -0.9
3,582,586 + AO353_16150 0.74 -0.1
3,582,586 + AO353_16150 0.74 -0.3
3,582,598 + AO353_16150 0.75 +0.7
3,582,598 + AO353_16150 0.75 +0.5
3,582,598 + AO353_16150 0.75 +0.1
3,582,599 - AO353_16150 0.75 +2.7
3,582,601 + AO353_16150 0.75 -0.9
3,582,601 + AO353_16150 0.75 -0.3
3,582,601 + AO353_16150 0.75 +0.5
3,582,601 + AO353_16150 0.75 -1.9
3,582,601 + AO353_16150 0.75 +0.5
3,582,602 - AO353_16150 0.75 +0.5
3,582,602 - AO353_16150 0.75 +2.7
3,582,602 - AO353_16150 0.75 +0.1
3,582,602 - AO353_16150 0.75 +0.1
3,582,602 - AO353_16150 0.75 -0.2
3,582,632 - AO353_16150 0.77 -0.4
3,582,677 - AO353_16150 0.79 +1.5
3,582,697 + AO353_16150 0.81 +1.7
3,582,697 + AO353_16150 0.81 -0.4
3,582,698 - AO353_16150 0.81 -0.7
3,582,698 - AO353_16150 0.81 -0.4
3,582,698 - AO353_16150 0.81 +1.1
3,582,698 - AO353_16150 0.81 -1.9
3,582,698 - AO353_16150 0.81 -0.4
3,582,740 + AO353_16150 0.83 +1.7
3,582,741 - AO353_16150 0.83 +2.0
3,582,741 - AO353_16150 0.83 +0.1
3,582,865 + +0.1
3,582,865 + +1.5
3,582,865 + -2.2
3,582,865 + -1.6
3,582,865 + -1.4
3,582,865 + -0.7
3,582,865 + +0.7
3,582,865 + +0.8
3,582,866 - +1.1
3,582,866 - -0.8
3,582,866 - -1.9
3,582,866 - +0.5
3,582,866 - +1.7
3,582,953 - +0.1
3,582,953 - +1.5
3,582,959 + -0.9
3,582,959 + +0.1
3,582,960 - -0.4
3,582,960 - +0.6
3,583,013 + -0.6
3,583,013 + -1.4
3,583,013 + -1.2
3,583,013 + -0.6
3,583,013 + +0.4
3,583,014 - -0.0
3,583,014 - -0.4
3,583,014 - -0.2
3,583,038 + +1.1
3,583,038 + +1.5
3,583,038 + +0.7
3,583,038 + -1.4
3,583,038 + -1.0
3,583,038 + -0.4
3,583,039 - +0.1
3,583,039 - -0.6
3,583,039 - -0.4
3,583,039 - -0.4
3,583,039 - +0.1
3,583,096 - AO353_16155 0.15 -1.4
3,583,225 - AO353_16155 0.61 +1.1
3,583,272 + AO353_16155 0.77 -0.4
3,583,272 + AO353_16155 0.77 -0.3
3,583,273 - AO353_16155 0.78 +1.1
3,583,273 - AO353_16155 0.78 -0.9
3,583,294 + AO353_16155 0.85 -1.2
3,583,326 - +1.1
3,583,326 - -1.4
3,583,326 - -1.3
3,583,382 + -1.0
3,583,382 + -0.4
3,583,383 - +0.7
3,583,389 + -0.4
3,583,389 + -1.9
3,583,389 + +1.1
3,583,389 + +0.1
3,583,389 + -1.0
3,583,390 - +0.7
3,583,390 - -0.9
3,583,423 + -0.1
3,583,424 - -0.6
3,583,455 + +1.1
3,583,455 + +2.3
3,583,455 + +0.1
3,583,456 - -0.1
3,583,456 - +0.1
3,583,456 - +0.3
3,583,456 - -0.9
3,583,456 - +1.1
3,583,456 - -1.9
3,583,554 - -0.6
3,583,900 + AO353_16160 0.31 -0.1
3,583,900 + AO353_16160 0.31 -0.4
3,583,900 + AO353_16160 0.31 -0.7
3,583,900 + AO353_16160 0.31 -1.4
3,583,901 - AO353_16160 0.31 -0.6
3,583,901 - AO353_16160 0.31 -0.2
3,583,901 - AO353_16160 0.31 -0.5
3,584,228 + AO353_16160 0.52 +0.6
3,584,230 + AO353_16160 0.52 -0.4
3,584,230 + AO353_16160 0.52 +1.7
3,584,230 + AO353_16160 0.52 -0.5
3,584,230 + AO353_16160 0.52 +0.7
3,584,230 + AO353_16160 0.52 -1.2
3,584,230 + AO353_16160 0.52 +0.5
3,584,230 + AO353_16160 0.52 +1.1
3,584,231 - AO353_16160 0.52 +0.6
3,584,231 - AO353_16160 0.52 -1.4
3,584,231 - AO353_16160 0.52 +0.1
3,584,231 - AO353_16160 0.52 +0.3
3,584,297 + AO353_16160 0.56 +1.1
3,584,297 + AO353_16160 0.56 -0.6
3,584,298 - AO353_16160 0.56 -0.1
3,584,370 + AO353_16160 0.60 +0.7
3,584,370 + AO353_16160 0.60 -0.3
3,584,418 + AO353_16160 0.63 +1.1
3,584,551 - AO353_16160 0.72 +0.1
3,584,551 - AO353_16160 0.72 -0.3
3,584,560 + AO353_16160 0.72 +0.6
3,584,560 + AO353_16160 0.72 -1.4
3,584,561 - AO353_16160 0.72 -0.9
3,584,561 - AO353_16160 0.72 +1.1
3,584,561 - AO353_16160 0.72 -0.4
3,584,655 + AO353_16160 0.78 +1.5
3,584,656 - AO353_16160 0.78 -0.3
3,584,773 - AO353_16160 0.85 -0.3
3,584,809 - AO353_16160 0.88 +0.7
3,584,815 + AO353_16160 0.88 +0.1
3,584,833 - AO353_16160 0.89 +0.5
3,584,876 - -0.3
3,584,876 - -1.4
3,584,928 + +1.1
3,584,929 - +0.4
3,584,929 - -0.0
3,584,929 - +0.1
3,585,011 - -1.9
3,585,033 + -0.9
3,585,033 + +0.3
3,585,033 + -0.9
3,585,033 + +1.1
3,585,034 - -0.4
3,585,034 - -1.2
3,585,034 - +1.7
3,585,034 - -1.6
3,585,034 - -0.9
3,585,041 - -0.7
3,585,051 + +0.9
3,585,051 + +0.1
3,585,051 + -0.3
3,585,052 - +1.1
3,585,052 - +0.6
3,585,052 - +0.3
3,585,052 - -1.0
3,585,052 - +0.8
3,585,052 - +0.1
3,585,129 + -0.3
3,585,129 + -1.4
3,585,129 + +0.5
3,585,130 - +1.1
3,585,300 + -0.7
3,585,300 + -1.2
3,585,300 + +0.1
3,585,300 + -0.9
3,585,301 - +0.4
3,585,350 - +0.1
3,585,439 + +0.7
3,585,487 - +0.1
3,585,518 + +0.1
3,585,518 + +0.1
3,585,519 - +1.6
3,585,519 - +1.1
3,585,535 + +0.6
3,585,780 - AO353_16165 0.26 +0.7
3,585,803 + AO353_16165 0.28 +0.7
3,585,803 + AO353_16165 0.28 +1.1
3,585,803 + AO353_16165 0.28 -0.4
3,585,803 + AO353_16165 0.28 +1.7
3,585,804 - AO353_16165 0.28 -0.9
3,585,886 + AO353_16165 0.34 +0.5
3,585,886 + AO353_16165 0.34 +0.1
3,585,969 + AO353_16165 0.40 +0.3
3,585,970 - AO353_16165 0.40 +0.5
3,585,970 - AO353_16165 0.40 -0.6
3,586,003 - AO353_16165 0.42 +0.1
3,586,003 - AO353_16165 0.42 -1.1

Or see this region's nucleotide sequence