Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_04640

Experiment: L-Glutamine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_04635 and AO353_04640 are separated by 89 nucleotidesAO353_04640 and AO353_04645 are separated by 176 nucleotides AO353_04635: AO353_04635 - FAD-dependent oxidoreductase, at 1,000,818 to 1,001,945 _04635 AO353_04640: AO353_04640 - hypothetical protein, at 1,002,035 to 1,002,661 _04640 AO353_04645: AO353_04645 - ABC transporter substrate-binding protein, at 1,002,838 to 1,003,614 _04645 Position (kb) 1002 1003Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1001.124 kb on + strand, within AO353_04635at 1001.125 kb on - strand, within AO353_04635at 1001.125 kb on - strand, within AO353_04635at 1001.125 kb on - strand, within AO353_04635at 1001.229 kb on + strand, within AO353_04635at 1001.229 kb on + strand, within AO353_04635at 1001.229 kb on + strand, within AO353_04635at 1001.229 kb on + strand, within AO353_04635at 1001.229 kb on + strand, within AO353_04635at 1001.230 kb on - strand, within AO353_04635at 1001.230 kb on - strand, within AO353_04635at 1001.230 kb on - strand, within AO353_04635at 1001.230 kb on - strand, within AO353_04635at 1001.230 kb on - strand, within AO353_04635at 1001.230 kb on - strand, within AO353_04635at 1001.230 kb on - strand, within AO353_04635at 1001.278 kb on - strand, within AO353_04635at 1001.278 kb on - strand, within AO353_04635at 1001.565 kb on + strand, within AO353_04635at 1001.565 kb on + strand, within AO353_04635at 1001.565 kb on + strand, within AO353_04635at 1001.565 kb on + strand, within AO353_04635at 1001.565 kb on + strand, within AO353_04635at 1001.565 kb on + strand, within AO353_04635at 1001.565 kb on + strand, within AO353_04635at 1001.565 kb on + strand, within AO353_04635at 1001.565 kb on + strand, within AO353_04635at 1001.565 kb on + strand, within AO353_04635at 1001.566 kb on - strand, within AO353_04635at 1001.566 kb on - strand, within AO353_04635at 1001.566 kb on - strand, within AO353_04635at 1001.566 kb on - strand, within AO353_04635at 1001.566 kb on - strand, within AO353_04635at 1001.566 kb on - strand, within AO353_04635at 1001.566 kb on - strand, within AO353_04635at 1001.566 kb on - strand, within AO353_04635at 1001.566 kb on - strand, within AO353_04635at 1001.566 kb on - strand, within AO353_04635at 1001.670 kb on + strand, within AO353_04635at 1001.670 kb on + strand, within AO353_04635at 1001.670 kb on + strand, within AO353_04635at 1001.731 kb on + strand, within AO353_04635at 1001.732 kb on - strand, within AO353_04635at 1001.782 kb on + strand, within AO353_04635at 1001.783 kb on - strand, within AO353_04635at 1002.068 kb on - strandat 1002.071 kb on + strandat 1002.158 kb on + strand, within AO353_04640at 1002.158 kb on + strand, within AO353_04640at 1002.158 kb on + strand, within AO353_04640at 1002.158 kb on + strand, within AO353_04640at 1002.159 kb on - strand, within AO353_04640at 1002.159 kb on - strand, within AO353_04640at 1002.254 kb on + strand, within AO353_04640at 1002.254 kb on + strand, within AO353_04640at 1002.255 kb on - strand, within AO353_04640at 1002.355 kb on + strand, within AO353_04640at 1002.355 kb on + strand, within AO353_04640at 1002.356 kb on - strand, within AO353_04640at 1002.356 kb on - strand, within AO353_04640at 1002.356 kb on - strand, within AO353_04640at 1002.356 kb on - strandat 1002.356 kb on - strand, within AO353_04640at 1002.409 kb on + strand, within AO353_04640at 1002.410 kb on - strand, within AO353_04640at 1002.478 kb on + strand, within AO353_04640at 1002.478 kb on + strand, within AO353_04640at 1002.478 kb on + strand, within AO353_04640at 1002.478 kb on + strand, within AO353_04640at 1002.478 kb on + strand, within AO353_04640at 1002.478 kb on + strand, within AO353_04640at 1002.478 kb on + strand, within AO353_04640at 1002.478 kb on + strand, within AO353_04640at 1002.479 kb on - strand, within AO353_04640at 1002.479 kb on - strand, within AO353_04640at 1002.479 kb on - strand, within AO353_04640at 1002.479 kb on - strand, within AO353_04640at 1002.479 kb on - strand, within AO353_04640at 1002.479 kb on - strand, within AO353_04640at 1002.479 kb on - strand, within AO353_04640at 1002.479 kb on - strand, within AO353_04640at 1002.479 kb on - strand, within AO353_04640at 1002.511 kb on + strand, within AO353_04640at 1002.511 kb on + strand, within AO353_04640at 1002.511 kb on + strand, within AO353_04640at 1002.511 kb on + strand, within AO353_04640at 1002.512 kb on - strand, within AO353_04640at 1002.512 kb on - strand, within AO353_04640at 1002.512 kb on - strand, within AO353_04640at 1002.593 kb on + strand, within AO353_04640at 1002.593 kb on + strand, within AO353_04640at 1002.593 kb on + strand, within AO353_04640at 1002.593 kb on + strand, within AO353_04640at 1002.593 kb on + strand, within AO353_04640at 1002.593 kb on + strand, within AO353_04640at 1002.593 kb on + strand, within AO353_04640at 1002.593 kb on + strand, within AO353_04640at 1002.593 kb on + strand, within AO353_04640at 1002.593 kb on + strand, within AO353_04640at 1002.593 kb on + strand, within AO353_04640at 1002.593 kb on + strand, within AO353_04640at 1002.593 kb on + strand, within AO353_04640at 1002.593 kb on + strand, within AO353_04640at 1002.593 kb on + strand, within AO353_04640at 1002.593 kb on + strand, within AO353_04640at 1002.593 kb on + strand, within AO353_04640at 1002.593 kb on + strand, within AO353_04640at 1002.593 kb on + strand, within AO353_04640at 1002.593 kb on + strand, within AO353_04640at 1002.594 kb on - strand, within AO353_04640at 1002.594 kb on - strand, within AO353_04640at 1002.594 kb on - strand, within AO353_04640at 1002.594 kb on - strand, within AO353_04640at 1002.594 kb on - strand, within AO353_04640at 1002.594 kb on - strand, within AO353_04640at 1002.594 kb on - strand, within AO353_04640at 1002.594 kb on - strand, within AO353_04640at 1002.594 kb on - strand, within AO353_04640at 1002.594 kb on - strand, within AO353_04640at 1002.594 kb on - strand, within AO353_04640at 1002.594 kb on - strand, within AO353_04640at 1002.594 kb on - strand, within AO353_04640at 1002.594 kb on - strand, within AO353_04640at 1002.594 kb on - strand, within AO353_04640at 1002.594 kb on - strand, within AO353_04640at 1002.594 kb on - strand, within AO353_04640at 1002.594 kb on - strand, within AO353_04640at 1002.594 kb on - strand, within AO353_04640at 1002.594 kb on - strand, within AO353_04640at 1002.594 kb on - strand, within AO353_04640at 1002.594 kb on - strand, within AO353_04640at 1002.597 kb on + strand, within AO353_04640at 1002.597 kb on + strand, within AO353_04640at 1002.597 kb on + strand, within AO353_04640at 1002.597 kb on + strand, within AO353_04640at 1002.597 kb on + strand, within AO353_04640at 1002.597 kb on + strand, within AO353_04640at 1002.597 kb on + strand, within AO353_04640at 1002.597 kb on + strand, within AO353_04640at 1002.598 kb on - strand, within AO353_04640at 1002.598 kb on - strand, within AO353_04640at 1002.598 kb on - strand, within AO353_04640at 1002.598 kb on - strand, within AO353_04640at 1002.632 kb on + strandat 1002.633 kb on - strandat 1002.633 kb on - strandat 1002.633 kb on - strandat 1002.659 kb on + strandat 1002.660 kb on - strandat 1002.667 kb on + strandat 1002.667 kb on + strandat 1002.667 kb on + strandat 1002.668 kb on - strandat 1002.668 kb on - strandat 1002.682 kb on - strandat 1002.768 kb on + strandat 1002.768 kb on + strandat 1002.768 kb on + strandat 1002.768 kb on + strandat 1002.769 kb on - strandat 1002.848 kb on + strandat 1002.848 kb on + strandat 1002.848 kb on + strandat 1002.848 kb on + strandat 1002.848 kb on + strandat 1002.849 kb on - strandat 1002.852 kb on + strandat 1002.852 kb on + strandat 1002.853 kb on - strandat 1002.853 kb on - strandat 1002.866 kb on + strandat 1002.866 kb on + strandat 1002.866 kb on + strandat 1002.866 kb on + strandat 1002.867 kb on - strandat 1002.867 kb on - strandat 1002.867 kb on - strandat 1002.986 kb on + strand, within AO353_04645at 1002.986 kb on + strand, within AO353_04645at 1002.987 kb on - strand, within AO353_04645at 1002.987 kb on - strand, within AO353_04645at 1002.987 kb on - strand, within AO353_04645at 1003.068 kb on + strand, within AO353_04645at 1003.112 kb on + strand, within AO353_04645at 1003.112 kb on + strand, within AO353_04645at 1003.112 kb on + strand, within AO353_04645at 1003.112 kb on + strand, within AO353_04645at 1003.112 kb on + strand, within AO353_04645at 1003.112 kb on + strand, within AO353_04645at 1003.113 kb on - strand, within AO353_04645at 1003.113 kb on - strand, within AO353_04645at 1003.113 kb on - strand, within AO353_04645at 1003.113 kb on - strand, within AO353_04645at 1003.113 kb on - strand, within AO353_04645at 1003.113 kb on - strand, within AO353_04645at 1003.113 kb on - strand, within AO353_04645at 1003.113 kb on - strand, within AO353_04645at 1003.113 kb on - strand, within AO353_04645at 1003.113 kb on - strand, within AO353_04645at 1003.133 kb on + strand, within AO353_04645at 1003.289 kb on + strand, within AO353_04645at 1003.289 kb on + strand, within AO353_04645at 1003.289 kb on + strand, within AO353_04645at 1003.289 kb on + strand, within AO353_04645at 1003.289 kb on + strand, within AO353_04645at 1003.289 kb on + strand, within AO353_04645at 1003.289 kb on + strand, within AO353_04645at 1003.289 kb on + strand, within AO353_04645at 1003.289 kb on + strand, within AO353_04645at 1003.290 kb on - strand, within AO353_04645at 1003.290 kb on - strand, within AO353_04645at 1003.290 kb on - strand, within AO353_04645at 1003.290 kb on - strand, within AO353_04645at 1003.290 kb on - strand, within AO353_04645at 1003.290 kb on - strand, within AO353_04645at 1003.290 kb on - strand, within AO353_04645at 1003.292 kb on + strand, within AO353_04645at 1003.292 kb on + strand, within AO353_04645at 1003.292 kb on + strand, within AO353_04645at 1003.292 kb on + strand, within AO353_04645at 1003.292 kb on + strand, within AO353_04645at 1003.292 kb on + strand, within AO353_04645at 1003.292 kb on + strand, within AO353_04645at 1003.292 kb on + strand, within AO353_04645at 1003.292 kb on + strand, within AO353_04645at 1003.293 kb on - strand, within AO353_04645at 1003.293 kb on - strand, within AO353_04645at 1003.293 kb on - strand, within AO353_04645at 1003.293 kb on - strand, within AO353_04645at 1003.293 kb on - strand, within AO353_04645at 1003.293 kb on - strand, within AO353_04645at 1003.321 kb on - strand, within AO353_04645at 1003.321 kb on - strand, within AO353_04645at 1003.461 kb on - strand, within AO353_04645

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (C)
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1,001,124 + AO353_04635 0.27 -0.5
1,001,125 - AO353_04635 0.27 -0.5
1,001,125 - AO353_04635 0.27 -1.1
1,001,125 - AO353_04635 0.27 -0.9
1,001,229 + AO353_04635 0.36 +0.1
1,001,229 + AO353_04635 0.36 +0.1
1,001,229 + AO353_04635 0.36 -0.9
1,001,229 + AO353_04635 0.36 -1.7
1,001,229 + AO353_04635 0.36 -0.7
1,001,230 - AO353_04635 0.37 -0.3
1,001,230 - AO353_04635 0.37 +0.9
1,001,230 - AO353_04635 0.37 +0.6
1,001,230 - AO353_04635 0.37 -1.9
1,001,230 - AO353_04635 0.37 -0.5
1,001,230 - AO353_04635 0.37 +1.1
1,001,230 - AO353_04635 0.37 +1.1
1,001,278 - AO353_04635 0.41 -0.9
1,001,278 - AO353_04635 0.41 -1.6
1,001,565 + AO353_04635 0.66 +0.2
1,001,565 + AO353_04635 0.66 +0.4
1,001,565 + AO353_04635 0.66 -0.7
1,001,565 + AO353_04635 0.66 +0.1
1,001,565 + AO353_04635 0.66 +1.7
1,001,565 + AO353_04635 0.66 -0.9
1,001,565 + AO353_04635 0.66 +0.9
1,001,565 + AO353_04635 0.66 -1.9
1,001,565 + AO353_04635 0.66 -2.2
1,001,565 + AO353_04635 0.66 -1.1
1,001,566 - AO353_04635 0.66 -0.1
1,001,566 - AO353_04635 0.66 +1.1
1,001,566 - AO353_04635 0.66 -0.9
1,001,566 - AO353_04635 0.66 +0.7
1,001,566 - AO353_04635 0.66 -0.3
1,001,566 - AO353_04635 0.66 +1.1
1,001,566 - AO353_04635 0.66 -0.7
1,001,566 - AO353_04635 0.66 +1.7
1,001,566 - AO353_04635 0.66 -0.9
1,001,566 - AO353_04635 0.66 +1.3
1,001,670 + AO353_04635 0.76 +1.5
1,001,670 + AO353_04635 0.76 -0.5
1,001,670 + AO353_04635 0.76 +1.7
1,001,731 + AO353_04635 0.81 -1.9
1,001,732 - AO353_04635 0.81 +0.1
1,001,782 + AO353_04635 0.85 +3.1
1,001,783 - AO353_04635 0.86 -0.9
1,002,068 - -0.3
1,002,071 + +0.1
1,002,158 + AO353_04640 0.20 -2.2
1,002,158 + AO353_04640 0.20 -0.6
1,002,158 + AO353_04640 0.20 -0.2
1,002,158 + AO353_04640 0.20 -0.4
1,002,159 - AO353_04640 0.20 -0.4
1,002,159 - AO353_04640 0.20 +0.4
1,002,254 + AO353_04640 0.35 +0.7
1,002,254 + AO353_04640 0.35 -0.0
1,002,255 - AO353_04640 0.35 -2.7
1,002,355 + AO353_04640 0.51 -2.0
1,002,355 + AO353_04640 0.51 +0.7
1,002,356 - AO353_04640 0.51 +0.3
1,002,356 - AO353_04640 0.51 -1.4
1,002,356 - AO353_04640 0.51 -0.7
1,002,356 - +0.1
1,002,356 - AO353_04640 0.51 +0.1
1,002,409 + AO353_04640 0.60 +1.1
1,002,410 - AO353_04640 0.60 +0.6
1,002,478 + AO353_04640 0.71 +0.9
1,002,478 + AO353_04640 0.71 +0.7
1,002,478 + AO353_04640 0.71 +1.1
1,002,478 + AO353_04640 0.71 +0.1
1,002,478 + AO353_04640 0.71 -0.9
1,002,478 + AO353_04640 0.71 +0.6
1,002,478 + AO353_04640 0.71 -0.4
1,002,478 + AO353_04640 0.71 -1.6
1,002,479 - AO353_04640 0.71 +0.7
1,002,479 - AO353_04640 0.71 +2.1
1,002,479 - AO353_04640 0.71 +0.6
1,002,479 - AO353_04640 0.71 -0.4
1,002,479 - AO353_04640 0.71 -0.6
1,002,479 - AO353_04640 0.71 +0.6
1,002,479 - AO353_04640 0.71 -0.3
1,002,479 - AO353_04640 0.71 -0.9
1,002,479 - AO353_04640 0.71 -1.7
1,002,511 + AO353_04640 0.76 -1.7
1,002,511 + AO353_04640 0.76 -0.4
1,002,511 + AO353_04640 0.76 +2.1
1,002,511 + AO353_04640 0.76 -0.4
1,002,512 - AO353_04640 0.76 -0.3
1,002,512 - AO353_04640 0.76 -1.2
1,002,512 - AO353_04640 0.76 +1.1
1,002,593 + AO353_04640 0.89 -0.5
1,002,593 + AO353_04640 0.89 -0.9
1,002,593 + AO353_04640 0.89 +0.3
1,002,593 + AO353_04640 0.89 -0.4
1,002,593 + AO353_04640 0.89 +0.3
1,002,593 + AO353_04640 0.89 -0.4
1,002,593 + AO353_04640 0.89 +0.3
1,002,593 + AO353_04640 0.89 +1.7
1,002,593 + AO353_04640 0.89 +0.9
1,002,593 + AO353_04640 0.89 +1.1
1,002,593 + AO353_04640 0.89 -0.4
1,002,593 + AO353_04640 0.89 -0.4
1,002,593 + AO353_04640 0.89 -0.7
1,002,593 + AO353_04640 0.89 -2.4
1,002,593 + AO353_04640 0.89 +1.6
1,002,593 + AO353_04640 0.89 -0.4
1,002,593 + AO353_04640 0.89 +0.7
1,002,593 + AO353_04640 0.89 -0.1
1,002,593 + AO353_04640 0.89 -0.4
1,002,593 + AO353_04640 0.89 -0.6
1,002,594 - AO353_04640 0.89 -0.1
1,002,594 - AO353_04640 0.89 -1.4
1,002,594 - AO353_04640 0.89 +0.9
1,002,594 - AO353_04640 0.89 -0.3
1,002,594 - AO353_04640 0.89 +0.7
1,002,594 - AO353_04640 0.89 +0.1
1,002,594 - AO353_04640 0.89 -0.6
1,002,594 - AO353_04640 0.89 -1.4
1,002,594 - AO353_04640 0.89 -0.9
1,002,594 - AO353_04640 0.89 -0.2
1,002,594 - AO353_04640 0.89 -0.4
1,002,594 - AO353_04640 0.89 -1.3
1,002,594 - AO353_04640 0.89 +0.9
1,002,594 - AO353_04640 0.89 -0.7
1,002,594 - AO353_04640 0.89 +0.7
1,002,594 - AO353_04640 0.89 -1.6
1,002,594 - AO353_04640 0.89 +0.7
1,002,594 - AO353_04640 0.89 -0.1
1,002,594 - AO353_04640 0.89 -0.9
1,002,594 - AO353_04640 0.89 +0.9
1,002,594 - AO353_04640 0.89 -0.0
1,002,594 - AO353_04640 0.89 -1.4
1,002,597 + AO353_04640 0.90 +1.1
1,002,597 + AO353_04640 0.90 -0.4
1,002,597 + AO353_04640 0.90 -3.2
1,002,597 + AO353_04640 0.90 -1.2
1,002,597 + AO353_04640 0.90 -1.4
1,002,597 + AO353_04640 0.90 +0.1
1,002,597 + AO353_04640 0.90 -0.3
1,002,597 + AO353_04640 0.90 +0.1
1,002,598 - AO353_04640 0.90 +0.7
1,002,598 - AO353_04640 0.90 +0.4
1,002,598 - AO353_04640 0.90 +0.1
1,002,598 - AO353_04640 0.90 +0.6
1,002,632 + -0.2
1,002,633 - -0.9
1,002,633 - +0.6
1,002,633 - +0.1
1,002,659 + +0.3
1,002,660 - -2.2
1,002,667 + -2.9
1,002,667 + -0.2
1,002,667 + +1.7
1,002,668 - +1.7
1,002,668 - +0.1
1,002,682 - -1.4
1,002,768 + +0.1
1,002,768 + +0.1
1,002,768 + +1.6
1,002,768 + -1.2
1,002,769 - +1.7
1,002,848 + +0.7
1,002,848 + -0.7
1,002,848 + -0.9
1,002,848 + -1.4
1,002,848 + +0.1
1,002,849 - -0.9
1,002,852 + -0.1
1,002,852 + -0.9
1,002,853 - +0.5
1,002,853 - +2.1
1,002,866 + +0.1
1,002,866 + +2.5
1,002,866 + +0.1
1,002,866 + +0.7
1,002,867 - +1.5
1,002,867 - +1.1
1,002,867 - -0.0
1,002,986 + AO353_04645 0.19 +0.0
1,002,986 + AO353_04645 0.19 +1.1
1,002,987 - AO353_04645 0.19 +1.5
1,002,987 - AO353_04645 0.19 -2.7
1,002,987 - AO353_04645 0.19 +2.1
1,003,068 + AO353_04645 0.30 +0.7
1,003,112 + AO353_04645 0.35 +0.7
1,003,112 + AO353_04645 0.35 -0.6
1,003,112 + AO353_04645 0.35 +0.1
1,003,112 + AO353_04645 0.35 +0.9
1,003,112 + AO353_04645 0.35 +0.4
1,003,112 + AO353_04645 0.35 +0.0
1,003,113 - AO353_04645 0.35 +1.6
1,003,113 - AO353_04645 0.35 +1.8
1,003,113 - AO353_04645 0.35 +1.1
1,003,113 - AO353_04645 0.35 -0.4
1,003,113 - AO353_04645 0.35 +2.3
1,003,113 - AO353_04645 0.35 +1.1
1,003,113 - AO353_04645 0.35 -0.9
1,003,113 - AO353_04645 0.35 -0.0
1,003,113 - AO353_04645 0.35 +0.6
1,003,113 - AO353_04645 0.35 -0.0
1,003,133 + AO353_04645 0.38 +0.5
1,003,289 + AO353_04645 0.58 -0.7
1,003,289 + AO353_04645 0.58 -0.4
1,003,289 + AO353_04645 0.58 +0.6
1,003,289 + AO353_04645 0.58 +1.1
1,003,289 + AO353_04645 0.58 +1.7
1,003,289 + AO353_04645 0.58 -0.6
1,003,289 + AO353_04645 0.58 +1.1
1,003,289 + AO353_04645 0.58 +1.9
1,003,289 + AO353_04645 0.58 +1.1
1,003,290 - AO353_04645 0.58 -0.7
1,003,290 - AO353_04645 0.58 -0.0
1,003,290 - AO353_04645 0.58 +2.7
1,003,290 - AO353_04645 0.58 -0.9
1,003,290 - AO353_04645 0.58 -0.1
1,003,290 - AO353_04645 0.58 -0.9
1,003,290 - AO353_04645 0.58 +0.3
1,003,292 + AO353_04645 0.58 +1.7
1,003,292 + AO353_04645 0.58 -0.9
1,003,292 + AO353_04645 0.58 +0.1
1,003,292 + AO353_04645 0.58 +0.1
1,003,292 + AO353_04645 0.58 +0.6
1,003,292 + AO353_04645 0.58 +0.1
1,003,292 + AO353_04645 0.58 +0.4
1,003,292 + AO353_04645 0.58 +0.6
1,003,292 + AO353_04645 0.58 -0.2
1,003,293 - AO353_04645 0.59 -1.4
1,003,293 - AO353_04645 0.59 -0.4
1,003,293 - AO353_04645 0.59 -0.6
1,003,293 - AO353_04645 0.59 +0.9
1,003,293 - AO353_04645 0.59 -0.5
1,003,293 - AO353_04645 0.59 +2.1
1,003,321 - AO353_04645 0.62 +0.6
1,003,321 - AO353_04645 0.62 +1.9
1,003,461 - AO353_04645 0.80 +0.5

Or see this region's nucleotide sequence