Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS17585

Experiment: Zinc 2.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS17580 and ABZR86_RS17585 are separated by 236 nucleotidesABZR86_RS17585 and ABZR86_RS17590 are separated by 85 nucleotidesABZR86_RS17590 and ABZR86_RS17595 are separated by 254 nucleotides ABZR86_RS17580: ABZR86_RS17580 - nucleoside triphosphate pyrophosphohydrolase family protein, at 3,971,620 to 3,972,585 _RS17580 ABZR86_RS17585: ABZR86_RS17585 - hypothetical protein, at 3,972,822 to 3,973,256 _RS17585 ABZR86_RS17590: ABZR86_RS17590 - hypothetical protein, at 3,973,342 to 3,973,644 _RS17590 ABZR86_RS17595: ABZR86_RS17595 - hypothetical protein, at 3,973,899 to 3,974,354 _RS17595 Position (kb) 3972 3973 3974Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3971.951 kb on - strand, within ABZR86_RS17580at 3971.969 kb on - strand, within ABZR86_RS17580at 3972.032 kb on - strand, within ABZR86_RS17580at 3972.102 kb on - strand, within ABZR86_RS17580at 3972.123 kb on + strand, within ABZR86_RS17580at 3972.203 kb on - strand, within ABZR86_RS17580at 3972.364 kb on + strand, within ABZR86_RS17580at 3972.398 kb on - strand, within ABZR86_RS17580at 3972.398 kb on - strand, within ABZR86_RS17580at 3972.449 kb on + strand, within ABZR86_RS17580at 3972.469 kb on + strand, within ABZR86_RS17580at 3972.469 kb on + strand, within ABZR86_RS17580at 3972.469 kb on + strand, within ABZR86_RS17580at 3972.470 kb on - strand, within ABZR86_RS17580at 3972.482 kb on - strand, within ABZR86_RS17580at 3972.491 kb on - strandat 3972.510 kb on + strandat 3972.511 kb on - strandat 3972.569 kb on + strandat 3972.570 kb on - strandat 3972.570 kb on - strandat 3972.585 kb on + strandat 3972.585 kb on + strandat 3972.585 kb on + strandat 3972.586 kb on - strandat 3972.586 kb on - strandat 3972.621 kb on - strandat 3972.641 kb on + strandat 3972.679 kb on + strandat 3972.679 kb on + strandat 3972.679 kb on + strandat 3972.679 kb on + strandat 3972.682 kb on + strandat 3972.682 kb on + strandat 3972.682 kb on + strandat 3972.682 kb on + strandat 3972.706 kb on + strandat 3972.713 kb on + strandat 3972.714 kb on - strandat 3972.723 kb on + strandat 3972.746 kb on + strandat 3972.746 kb on + strandat 3972.767 kb on + strandat 3972.768 kb on - strandat 3972.829 kb on + strandat 3972.830 kb on - strandat 3972.981 kb on + strand, within ABZR86_RS17585at 3972.982 kb on - strand, within ABZR86_RS17585at 3973.071 kb on + strand, within ABZR86_RS17585at 3973.083 kb on + strand, within ABZR86_RS17585at 3973.084 kb on - strand, within ABZR86_RS17585at 3973.099 kb on + strand, within ABZR86_RS17585at 3973.100 kb on - strand, within ABZR86_RS17585at 3973.119 kb on + strand, within ABZR86_RS17585at 3973.119 kb on + strand, within ABZR86_RS17585at 3973.120 kb on - strand, within ABZR86_RS17585at 3973.128 kb on - strand, within ABZR86_RS17585at 3973.148 kb on + strand, within ABZR86_RS17585at 3973.163 kb on + strand, within ABZR86_RS17585at 3973.207 kb on + strand, within ABZR86_RS17585at 3973.254 kb on + strandat 3973.343 kb on + strandat 3973.343 kb on + strandat 3973.343 kb on + strandat 3973.343 kb on + strandat 3973.368 kb on + strandat 3973.399 kb on - strand, within ABZR86_RS17590at 3973.399 kb on - strand, within ABZR86_RS17590at 3973.474 kb on + strand, within ABZR86_RS17590at 3973.474 kb on + strand, within ABZR86_RS17590at 3973.474 kb on + strand, within ABZR86_RS17590at 3973.474 kb on + strand, within ABZR86_RS17590at 3973.475 kb on - strand, within ABZR86_RS17590at 3973.475 kb on - strand, within ABZR86_RS17590at 3973.475 kb on - strand, within ABZR86_RS17590at 3973.499 kb on - strand, within ABZR86_RS17590at 3973.530 kb on - strand, within ABZR86_RS17590at 3973.530 kb on - strand, within ABZR86_RS17590at 3973.530 kb on - strand, within ABZR86_RS17590at 3973.530 kb on - strand, within ABZR86_RS17590at 3973.535 kb on + strand, within ABZR86_RS17590at 3973.536 kb on - strand, within ABZR86_RS17590at 3973.599 kb on - strand, within ABZR86_RS17590at 3973.645 kb on - strandat 3973.645 kb on - strandat 3973.645 kb on - strandat 3973.645 kb on - strandat 3973.774 kb on + strandat 3973.808 kb on - strandat 3973.829 kb on + strandat 3973.886 kb on + strandat 3973.887 kb on - strandat 3973.887 kb on - strandat 3973.887 kb on - strandat 3973.887 kb on - strandat 3973.923 kb on + strandat 3974.086 kb on + strand, within ABZR86_RS17595at 3974.086 kb on + strand, within ABZR86_RS17595at 3974.086 kb on + strand, within ABZR86_RS17595at 3974.086 kb on + strand, within ABZR86_RS17595at 3974.086 kb on + strand, within ABZR86_RS17595at 3974.086 kb on + strand, within ABZR86_RS17595at 3974.086 kb on + strand, within ABZR86_RS17595at 3974.087 kb on - strand, within ABZR86_RS17595at 3974.087 kb on - strand, within ABZR86_RS17595at 3974.087 kb on - strand, within ABZR86_RS17595at 3974.087 kb on - strand, within ABZR86_RS17595at 3974.087 kb on - strand, within ABZR86_RS17595at 3974.087 kb on - strand, within ABZR86_RS17595at 3974.134 kb on + strand, within ABZR86_RS17595at 3974.134 kb on + strand, within ABZR86_RS17595at 3974.134 kb on + strand, within ABZR86_RS17595at 3974.135 kb on - strand, within ABZR86_RS17595at 3974.135 kb on - strand, within ABZR86_RS17595at 3974.165 kb on + strand, within ABZR86_RS17595

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Per-strain Table

Position Strand Gene LocusTag Fraction Zinc 2.5 mM
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3,971,951 - ABZR86_RS17580 0.34 +0.8
3,971,969 - ABZR86_RS17580 0.36 +0.1
3,972,032 - ABZR86_RS17580 0.43 +1.0
3,972,102 - ABZR86_RS17580 0.50 -0.0
3,972,123 + ABZR86_RS17580 0.52 -0.2
3,972,203 - ABZR86_RS17580 0.60 -0.8
3,972,364 + ABZR86_RS17580 0.77 -0.0
3,972,398 - ABZR86_RS17580 0.81 -0.4
3,972,398 - ABZR86_RS17580 0.81 +0.7
3,972,449 + ABZR86_RS17580 0.86 +0.4
3,972,469 + ABZR86_RS17580 0.88 -0.0
3,972,469 + ABZR86_RS17580 0.88 -0.2
3,972,469 + ABZR86_RS17580 0.88 -1.0
3,972,470 - ABZR86_RS17580 0.88 +0.7
3,972,482 - ABZR86_RS17580 0.89 -3.7
3,972,491 - +0.6
3,972,510 + +0.2
3,972,511 - +0.5
3,972,569 + -0.3
3,972,570 - +0.5
3,972,570 - +0.3
3,972,585 + -1.9
3,972,585 + +1.3
3,972,585 + -0.2
3,972,586 - +0.1
3,972,586 - -0.6
3,972,621 - -0.0
3,972,641 + -0.6
3,972,679 + -0.9
3,972,679 + +0.1
3,972,679 + +0.5
3,972,679 + -0.9
3,972,682 + -0.1
3,972,682 + -1.3
3,972,682 + -0.3
3,972,682 + +1.2
3,972,706 + +0.3
3,972,713 + +0.5
3,972,714 - -0.1
3,972,723 + -1.3
3,972,746 + +2.1
3,972,746 + -0.5
3,972,767 + +0.1
3,972,768 - -0.9
3,972,829 + +1.4
3,972,830 - +1.3
3,972,981 + ABZR86_RS17585 0.37 -2.8
3,972,982 - ABZR86_RS17585 0.37 -0.5
3,973,071 + ABZR86_RS17585 0.57 -0.4
3,973,083 + ABZR86_RS17585 0.60 -0.3
3,973,084 - ABZR86_RS17585 0.60 -0.6
3,973,099 + ABZR86_RS17585 0.64 -0.4
3,973,100 - ABZR86_RS17585 0.64 +0.7
3,973,119 + ABZR86_RS17585 0.68 +0.8
3,973,119 + ABZR86_RS17585 0.68 -0.1
3,973,120 - ABZR86_RS17585 0.69 -0.7
3,973,128 - ABZR86_RS17585 0.70 -1.5
3,973,148 + ABZR86_RS17585 0.75 -2.1
3,973,163 + ABZR86_RS17585 0.78 -0.1
3,973,207 + ABZR86_RS17585 0.89 -0.3
3,973,254 + +0.4
3,973,343 + -0.1
3,973,343 + -0.2
3,973,343 + +0.6
3,973,343 + +0.2
3,973,368 + +0.3
3,973,399 - ABZR86_RS17590 0.19 +0.3
3,973,399 - ABZR86_RS17590 0.19 -0.3
3,973,474 + ABZR86_RS17590 0.44 +1.4
3,973,474 + ABZR86_RS17590 0.44 +0.6
3,973,474 + ABZR86_RS17590 0.44 +0.2
3,973,474 + ABZR86_RS17590 0.44 +0.7
3,973,475 - ABZR86_RS17590 0.44 -0.8
3,973,475 - ABZR86_RS17590 0.44 -0.3
3,973,475 - ABZR86_RS17590 0.44 +0.8
3,973,499 - ABZR86_RS17590 0.52 +0.6
3,973,530 - ABZR86_RS17590 0.62 -0.1
3,973,530 - ABZR86_RS17590 0.62 -1.8
3,973,530 - ABZR86_RS17590 0.62 +0.9
3,973,530 - ABZR86_RS17590 0.62 +0.3
3,973,535 + ABZR86_RS17590 0.64 -0.8
3,973,536 - ABZR86_RS17590 0.64 -0.0
3,973,599 - ABZR86_RS17590 0.85 -0.4
3,973,645 - -0.9
3,973,645 - -0.6
3,973,645 - +0.8
3,973,645 - +0.7
3,973,774 + -0.1
3,973,808 - +0.2
3,973,829 + +0.4
3,973,886 + -2.0
3,973,887 - -0.8
3,973,887 - +0.9
3,973,887 - +0.5
3,973,887 - +0.6
3,973,923 + -0.9
3,974,086 + ABZR86_RS17595 0.41 +0.2
3,974,086 + ABZR86_RS17595 0.41 -0.7
3,974,086 + ABZR86_RS17595 0.41 -0.0
3,974,086 + ABZR86_RS17595 0.41 +0.4
3,974,086 + ABZR86_RS17595 0.41 -0.5
3,974,086 + ABZR86_RS17595 0.41 -0.4
3,974,086 + ABZR86_RS17595 0.41 -0.4
3,974,087 - ABZR86_RS17595 0.41 -0.2
3,974,087 - ABZR86_RS17595 0.41 -1.0
3,974,087 - ABZR86_RS17595 0.41 -0.4
3,974,087 - ABZR86_RS17595 0.41 +0.4
3,974,087 - ABZR86_RS17595 0.41 -0.9
3,974,087 - ABZR86_RS17595 0.41 -0.1
3,974,134 + ABZR86_RS17595 0.52 +0.2
3,974,134 + ABZR86_RS17595 0.52 -1.4
3,974,134 + ABZR86_RS17595 0.52 -0.8
3,974,135 - ABZR86_RS17595 0.52 +0.9
3,974,135 - ABZR86_RS17595 0.52 -0.9
3,974,165 + ABZR86_RS17595 0.58 +0.9

Or see this region's nucleotide sequence