Experiment: MoYLS4 with Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2649 and DvMF_2650 are separated by 178 nucleotides DvMF_2650 and DvMF_2651 are separated by 57 nucleotides DvMF_2651 and DvMF_2652 are separated by 157 nucleotides DvMF_2652 and DvMF_2653 are separated by 61 nucleotides
DvMF_2649: DvMF_2649 - heat shock protein Hsp20 (RefSeq), at 3,350,757 to 3,351,314
_2649
DvMF_2650: DvMF_2650 - phosphodiesterase (RefSeq), at 3,351,493 to 3,352,041
_2650
DvMF_2651: DvMF_2651 - dihydrouridine synthase DuS (RefSeq), at 3,352,099 to 3,353,250
_2651
DvMF_2652: DvMF_2652 - transcriptional regulator, MerR family (RefSeq), at 3,353,408 to 3,353,779
_2652
DvMF_2653: DvMF_2653 - Carboxymuconolactone decarboxylase (RefSeq), at 3,353,841 to 3,354,257
_2653
Position (kb)
3352
3353
3354 Strain fitness (log2 ratio)
-1
0
1 at 3351.132 kb on - strand, within DvMF_2649 at 3351.397 kb on - strand at 3351.432 kb on + strand at 3351.720 kb on + strand, within DvMF_2650 at 3351.726 kb on - strand, within DvMF_2650 at 3352.268 kb on - strand, within DvMF_2651 at 3352.428 kb on + strand, within DvMF_2651 at 3352.436 kb on - strand, within DvMF_2651 at 3352.441 kb on - strand, within DvMF_2651 at 3352.695 kb on + strand, within DvMF_2651 at 3352.779 kb on + strand, within DvMF_2651 at 3352.787 kb on - strand, within DvMF_2651 at 3352.787 kb on - strand, within DvMF_2651 at 3352.831 kb on + strand, within DvMF_2651 at 3352.839 kb on - strand, within DvMF_2651 at 3352.857 kb on - strand, within DvMF_2651 at 3353.385 kb on - strand at 3353.433 kb on + strand at 3353.433 kb on + strand at 3353.448 kb on + strand, within DvMF_2652 at 3353.792 kb on + strand at 3353.833 kb on + strand at 3354.183 kb on - strand, within DvMF_2653
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Aluminum chloride 5 mM remove 3,351,132 - DvMF_2649 0.67 +0.3 3,351,397 - -0.4 3,351,432 + -0.6 3,351,720 + DvMF_2650 0.41 +0.1 3,351,726 - DvMF_2650 0.42 -1.1 3,352,268 - DvMF_2651 0.15 -0.3 3,352,428 + DvMF_2651 0.29 -0.5 3,352,436 - DvMF_2651 0.29 -0.5 3,352,441 - DvMF_2651 0.30 -1.5 3,352,695 + DvMF_2651 0.52 -0.2 3,352,779 + DvMF_2651 0.59 -0.9 3,352,787 - DvMF_2651 0.60 -0.4 3,352,787 - DvMF_2651 0.60 -0.2 3,352,831 + DvMF_2651 0.64 -0.2 3,352,839 - DvMF_2651 0.64 -0.4 3,352,857 - DvMF_2651 0.66 -0.3 3,353,385 - -0.5 3,353,433 + -0.6 3,353,433 + -0.3 3,353,448 + DvMF_2652 0.11 +0.2 3,353,792 + -0.6 3,353,833 + -0.2 3,354,183 - DvMF_2653 0.82 -0.6
Or see this region's nucleotide sequence