Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2188
Experiment: MoYLS4 with Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Aluminum chloride 5 mM |
---|---|---|---|---|---|
remove | |||||
2,732,161 | - | DvMF_2187 | 0.66 | -0.2 | |
2,732,344 | + | DvMF_2187 | 0.74 | +0.7 | |
2,732,490 | + | DvMF_2187 | 0.79 | -0.3 | |
2,732,559 | - | DvMF_2187 | 0.82 | -0.1 | |
2,732,602 | - | DvMF_2187 | 0.84 | +0.2 | |
2,732,616 | - | DvMF_2187 | 0.84 | -0.3 | |
2,733,034 | + | -0.3 | |||
2,733,034 | + | -0.2 | |||
2,733,034 | + | -0.4 | |||
2,733,034 | + | -0.5 | |||
2,733,042 | - | +0.0 | |||
2,733,042 | - | -0.6 | |||
2,733,042 | - | -0.4 | |||
2,733,207 | - | DvMF_2188 | 0.17 | -0.4 | |
2,733,403 | - | DvMF_2188 | 0.71 | -1.0 | |
2,733,424 | - | DvMF_2188 | 0.77 | +0.0 | |
2,733,450 | + | DvMF_2188 | 0.84 | +0.2 | |
2,733,572 | - | -0.7 | |||
2,733,629 | + | +0.4 | |||
2,733,648 | + | -0.7 | |||
2,733,663 | + | -0.4 | |||
2,733,746 | + | -0.4 | |||
2,733,759 | - | -0.3 | |||
2,733,761 | + | -0.4 | |||
2,733,769 | - | -0.0 | |||
2,733,795 | + | -0.2 | |||
2,733,798 | - | -0.6 | |||
2,733,817 | - | +0.2 | |||
2,733,828 | + | -0.1 | |||
2,733,829 | - | -0.7 | |||
2,733,846 | + | -0.4 | |||
2,733,846 | + | -0.2 | |||
2,733,866 | + | -0.0 | |||
2,734,487 | - | DvMF_2189 | 0.33 | -0.4 |
Or see this region's nucleotide sequence