Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1829
Experiment: MoYLS4 with Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Aluminum chloride 5 mM |
---|---|---|---|---|---|
remove | |||||
2,231,494 | - | -0.5 | |||
2,231,696 | + | -0.9 | |||
2,231,883 | + | -1.0 | |||
2,232,017 | - | -0.9 | |||
2,232,059 | - | -1.3 | |||
2,232,137 | - | DvMF_1829 | 0.11 | -1.3 | |
2,232,336 | + | DvMF_1829 | 0.23 | -2.0 | |
2,232,471 | - | DvMF_1829 | 0.32 | -1.1 | |
2,232,588 | + | DvMF_1829 | 0.40 | -1.0 | |
2,232,596 | - | DvMF_1829 | 0.40 | -0.8 | |
2,232,596 | - | DvMF_1829 | 0.40 | -0.9 | |
2,232,663 | - | DvMF_1829 | 0.44 | -0.3 | |
2,232,663 | - | DvMF_1829 | 0.44 | -0.9 | |
2,232,760 | + | DvMF_1829 | 0.51 | -1.7 | |
2,232,812 | - | DvMF_1829 | 0.54 | -0.4 | |
2,232,973 | - | DvMF_1829 | 0.64 | -1.5 | |
2,233,200 | + | DvMF_1829 | 0.79 | +0.1 | |
2,233,251 | + | DvMF_1829 | 0.82 | -1.0 | |
2,233,414 | + | -0.6 | |||
2,233,446 | + | -1.2 | |||
2,233,653 | - | -0.5 | |||
2,233,742 | - | -0.3 | |||
2,233,790 | + | -0.3 | |||
2,233,792 | + | +0.0 | |||
2,234,130 | + | DvMF_1830 | 0.26 | +0.3 | |
2,234,180 | - | DvMF_1830 | 0.31 | -0.5 | |
2,234,325 | - | DvMF_1830 | 0.46 | -1.4 |
Or see this region's nucleotide sequence