Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1792
Experiment: MoYLS4 with Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Aluminum chloride 5 mM |
---|---|---|---|---|---|
remove | |||||
2,191,664 | - | DvMF_1791 | 0.51 | -1.5 | |
2,191,861 | - | DvMF_1791 | 0.63 | -0.5 | |
2,192,047 | + | DvMF_1791 | 0.75 | -0.5 | |
2,192,079 | + | DvMF_1791 | 0.77 | +0.2 | |
2,192,184 | + | DvMF_1791 | 0.84 | -0.2 | |
2,192,194 | - | DvMF_1791 | 0.85 | +0.2 | |
2,192,629 | - | DvMF_1792 | 0.16 | +0.0 | |
2,192,659 | + | DvMF_1792 | 0.18 | -0.9 | |
2,192,752 | + | DvMF_1792 | 0.26 | +0.0 | |
2,192,770 | - | DvMF_1792 | 0.27 | -0.4 | |
2,192,931 | + | DvMF_1792 | 0.40 | -0.5 | |
2,192,941 | - | DvMF_1792 | 0.41 | -0.0 | |
2,192,947 | + | DvMF_1792 | 0.41 | -0.4 | |
2,193,206 | + | DvMF_1792 | 0.62 | -0.5 | |
2,193,383 | + | DvMF_1792 | 0.76 | -0.2 | |
2,193,431 | + | DvMF_1792 | 0.80 | -0.3 | |
2,193,536 | + | DvMF_1792 | 0.88 | -0.4 | |
2,193,833 | - | DvMF_1793 | 0.20 | -0.2 | |
2,193,855 | + | DvMF_1793 | 0.24 | -0.4 | |
2,194,210 | - | -0.2 | |||
2,194,247 | - | -0.3 | |||
2,194,247 | - | -0.1 | |||
2,194,399 | + | -0.1 | |||
2,194,616 | - | DvMF_1794 | 0.12 | -0.1 |
Or see this region's nucleotide sequence