Experiment: MoYLS4 with Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1657 and DvMF_1658 overlap by 1 nucleotides DvMF_1658 and DvMF_1659 overlap by 8 nucleotides DvMF_1659 and DvMF_1660 are separated by 72 nucleotides
DvMF_1657: DvMF_1657 - phage portal protein, HK97 family (RefSeq), at 2,033,742 to 2,034,968
_1657
DvMF_1658: DvMF_1658 - Terminase (RefSeq), at 2,034,968 to 2,036,665
_1658
DvMF_1659: DvMF_1659 - putative phage terminase, small subunit, P27 family (RefSeq), at 2,036,658 to 2,037,131
_1659
DvMF_1660: DvMF_1660 - HNH endonuclease (RefSeq), at 2,037,204 to 2,037,599
_1660
Position (kb)
2034
2035
2036
2037 Strain fitness (log2 ratio)
-1
0
1 at 2033.977 kb on - strand, within DvMF_1657 at 2034.028 kb on + strand, within DvMF_1657 at 2034.043 kb on - strand, within DvMF_1657 at 2034.043 kb on - strand, within DvMF_1657 at 2034.049 kb on - strand, within DvMF_1657 at 2034.088 kb on + strand, within DvMF_1657 at 2034.168 kb on + strand, within DvMF_1657 at 2034.452 kb on - strand, within DvMF_1657 at 2034.480 kb on - strand, within DvMF_1657 at 2034.600 kb on + strand, within DvMF_1657 at 2034.692 kb on + strand, within DvMF_1657 at 2034.977 kb on - strand at 2035.075 kb on + strand at 2035.309 kb on + strand, within DvMF_1658 at 2035.521 kb on + strand, within DvMF_1658 at 2035.720 kb on - strand, within DvMF_1658 at 2036.413 kb on + strand, within DvMF_1658 at 2036.572 kb on - strand at 2036.635 kb on - strand at 2036.803 kb on + strand, within DvMF_1659 at 2036.821 kb on + strand, within DvMF_1659 at 2036.821 kb on + strand, within DvMF_1659 at 2036.976 kb on - strand, within DvMF_1659 at 2036.976 kb on - strand, within DvMF_1659 at 2037.100 kb on - strand at 2037.201 kb on + strand at 2037.254 kb on - strand, within DvMF_1660 at 2037.285 kb on - strand, within DvMF_1660 at 2037.526 kb on - strand, within DvMF_1660 at 2037.600 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Aluminum chloride 5 mM remove 2,033,977 - DvMF_1657 0.19 -0.5 2,034,028 + DvMF_1657 0.23 -0.3 2,034,043 - DvMF_1657 0.25 -0.2 2,034,043 - DvMF_1657 0.25 -0.7 2,034,049 - DvMF_1657 0.25 -0.2 2,034,088 + DvMF_1657 0.28 -0.6 2,034,168 + DvMF_1657 0.35 -0.2 2,034,452 - DvMF_1657 0.58 -0.5 2,034,480 - DvMF_1657 0.60 -0.3 2,034,600 + DvMF_1657 0.70 -0.7 2,034,692 + DvMF_1657 0.77 -0.3 2,034,977 - +0.6 2,035,075 + -0.7 2,035,309 + DvMF_1658 0.20 +0.0 2,035,521 + DvMF_1658 0.33 -0.7 2,035,720 - DvMF_1658 0.44 -0.3 2,036,413 + DvMF_1658 0.85 -0.3 2,036,572 - -0.7 2,036,635 - -0.7 2,036,803 + DvMF_1659 0.31 -0.2 2,036,821 + DvMF_1659 0.34 -1.1 2,036,821 + DvMF_1659 0.34 -0.0 2,036,976 - DvMF_1659 0.67 -0.7 2,036,976 - DvMF_1659 0.67 +0.1 2,037,100 - +0.5 2,037,201 + -0.5 2,037,254 - DvMF_1660 0.13 -0.5 2,037,285 - DvMF_1660 0.20 -0.2 2,037,526 - DvMF_1660 0.81 -0.6 2,037,600 - -0.5
Or see this region's nucleotide sequence