Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1001
Experiment: MoYLS4 with Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Aluminum chloride 5 mM |
---|---|---|---|---|---|
remove | |||||
1,215,589 | + | DvMF_1000 | 0.37 | +1.0 | |
1,215,897 | - | DvMF_1000 | 0.68 | +1.3 | |
1,215,957 | + | DvMF_1000 | 0.74 | +1.6 | |
1,215,965 | - | DvMF_1000 | 0.75 | +1.2 | |
1,215,965 | - | DvMF_1000 | 0.75 | +1.0 | |
1,216,096 | - | DvMF_1000 | 0.88 | +1.2 | |
1,216,935 | + | DvMF_1001 | 0.57 | +0.1 | |
1,216,943 | - | DvMF_1001 | 0.58 | -0.9 | |
1,217,149 | + | DvMF_1001 | 0.76 | -0.4 | |
1,217,288 | + | DvMF_1001 | 0.89 | -0.2 | |
1,217,337 | + | -1.1 | |||
1,217,435 | - | -0.3 | |||
1,217,492 | + | -0.6 | |||
1,217,492 | + | -1.4 | |||
1,217,492 | + | +0.7 | |||
1,217,500 | - | -0.5 | |||
1,217,513 | + | -0.3 | |||
1,217,636 | - | DvMF_1002 | 0.16 | +0.1 | |
1,217,726 | - | DvMF_1002 | 0.22 | +0.2 | |
1,217,778 | - | DvMF_1002 | 0.25 | +0.1 | |
1,217,952 | - | DvMF_1002 | 0.37 | -0.1 | |
1,217,972 | - | DvMF_1002 | 0.39 | -0.5 | |
1,217,996 | + | DvMF_1002 | 0.40 | -0.3 | |
1,218,112 | + | DvMF_1002 | 0.48 | -0.3 | |
1,218,319 | + | DvMF_1002 | 0.62 | -0.3 |
Or see this region's nucleotide sequence