Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5045

Experiment: Vancomycin 0.24 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.24 mg/ml
5,819,908	+				-1.3
5,819,908	+				+0.4
5,819,909	-				+1.2
5,819,909	-				-1.5
5,819,909	-				+0.1
5,820,081	+				-0.6
5,820,081	+				-0.8
5,820,295	-		Pf6N2E2_5044	0.47	-0.3
5,820,384	+		Pf6N2E2_5044	0.67	-0.8
5,820,385	-		Pf6N2E2_5044	0.67	-1.0
5,820,457	+		Pf6N2E2_5044	0.83	-0.8
5,820,522	+				+2.1
5,820,523	-				+0.1
5,820,526	+				+1.1
5,820,526	+				+1.0
5,820,527	-				+0.2
5,820,527	-				-0.1
5,820,535	-				+0.6
5,820,535	-				+0.3
5,820,604	+				+0.5
5,820,615	+				-0.1
5,820,655	+				+0.1
5,820,655	+				+1.9
5,820,748	+				-0.7
5,820,748	+				+1.6
5,820,748	+				+0.8
5,820,748	+				-0.1
5,820,748	+				+0.6
5,820,748	+				-0.5
5,820,748	+				-0.7
5,820,748	+				+0.7
5,820,748	+				+0.9
5,820,748	+				-0.1
5,820,748	+				+0.8
5,820,748	+				+1.7
5,820,749	-				-0.5
5,820,749	-				-1.2
5,820,749	-				+0.1
5,820,749	-				+0.1
5,820,749	-				+0.9
5,820,749	-				-0.2
5,820,749	-				+0.5
5,820,749	-				+0.8
5,820,769	+				+0.9
5,820,770	-				+1.3
5,820,853	+		Pf6N2E2_5045	0.18	-0.5
5,820,853	+		Pf6N2E2_5045	0.18	+0.1
5,820,854	-		Pf6N2E2_5045	0.18	-0.4
5,820,854	-		Pf6N2E2_5045	0.18	+0.3
5,821,027	-		Pf6N2E2_5045	0.37	-0.7
5,821,060	-		Pf6N2E2_5045	0.41	-0.1
5,821,088	+		Pf6N2E2_5045	0.44	+0.7
5,821,089	-		Pf6N2E2_5045	0.44	-0.7
5,821,089	-		Pf6N2E2_5045	0.44	-0.2
5,821,166	+		Pf6N2E2_5045	0.52	-0.2
5,821,348	+		Pf6N2E2_5045	0.72	+0.6
5,821,387	+		Pf6N2E2_5045	0.77	+0.3
5,821,387	+		Pf6N2E2_5045	0.77	+0.2
5,821,387	+		Pf6N2E2_5045	0.77	-0.4
5,821,387	+		Pf6N2E2_5045	0.77	-0.8
5,821,387	+		Pf6N2E2_5045	0.77	+0.4
5,821,388	-		Pf6N2E2_5045	0.77	+0.9
5,821,388	-		Pf6N2E2_5045	0.77	-2.3
5,821,388	-		Pf6N2E2_5045	0.77	-1.4
5,821,388	-		Pf6N2E2_5045	0.77	-0.3
5,821,388	-		Pf6N2E2_5045	0.77	+0.3
5,821,388	-		Pf6N2E2_5045	0.77	+0.5
5,821,388	-		Pf6N2E2_5045	0.77	+0.5
5,821,388	-		Pf6N2E2_5045	0.77	-0.2
5,821,393	+		Pf6N2E2_5045	0.77	-0.8
5,821,393	+		Pf6N2E2_5045	0.77	+0.1
5,821,393	+		Pf6N2E2_5045	0.77	-0.1
5,821,393	+		Pf6N2E2_5045	0.77	-0.1
5,821,394	-		Pf6N2E2_5045	0.78	+1.0
5,821,394	-		Pf6N2E2_5045	0.78	-1.2
5,821,394	-		Pf6N2E2_5045	0.78	+0.7
5,821,394	-		Pf6N2E2_5045	0.78	-0.7
5,821,394	-		Pf6N2E2_5045	0.78	-0.2
5,821,394	-		Pf6N2E2_5045	0.78	+0.2
5,821,394	-		Pf6N2E2_5045	0.78	+0.3
5,821,394	-		Pf6N2E2_5045	0.78	+1.2
5,821,432	+		Pf6N2E2_5045	0.82	-0.6
5,821,432	+		Pf6N2E2_5045	0.82	+1.1
5,821,432	+		Pf6N2E2_5045	0.82	-0.6
5,821,432	+		Pf6N2E2_5045	0.82	-1.6
5,821,433	-		Pf6N2E2_5045	0.82	-0.3
5,821,433	-		Pf6N2E2_5045	0.82	+0.3
5,821,433	-		Pf6N2E2_5045	0.82	+0.3
5,821,433	-		Pf6N2E2_5045	0.82	+0.5
5,821,433	-		Pf6N2E2_5045	0.82	-0.5
5,821,433	-		Pf6N2E2_5045	0.82	+0.7
5,821,433	-		Pf6N2E2_5045	0.82	+0.1
5,821,433	-		Pf6N2E2_5045	0.82	+0.6
5,821,438	+		Pf6N2E2_5045	0.82	-1.3
5,821,438	+		Pf6N2E2_5045	0.82	-0.5
5,821,438	+		Pf6N2E2_5045	0.82	-1.3
5,821,439	-		Pf6N2E2_5045	0.83	-0.3
5,821,439	-		Pf6N2E2_5045	0.83	-0.2
5,821,439	-		Pf6N2E2_5045	0.83	+1.1
5,821,600	-				+1.2
5,821,604	+				-0.4
5,821,605	-				+1.1
5,821,643	+				-0.6
5,821,648	+				-1.1
5,821,648	+				-0.5
5,821,648	+				-0.1
5,821,648	+				-0.2
5,821,649	-				+0.2
5,821,943	+		Pf6N2E2_5046	0.22	+0.2
5,821,970	+		Pf6N2E2_5046	0.24	-1.6
5,821,970	+		Pf6N2E2_5046	0.24	+0.1
5,821,970	+		Pf6N2E2_5046	0.24	+1.2
5,821,971	-		Pf6N2E2_5046	0.24	+1.4
5,821,971	-		Pf6N2E2_5046	0.24	+1.2
5,821,971	-		Pf6N2E2_5046	0.24	+0.9
5,821,971	-		Pf6N2E2_5046	0.24	+0.7
5,822,167	+		Pf6N2E2_5046	0.38	-0.0
5,822,167	+		Pf6N2E2_5046	0.38	-0.1
5,822,167	+		Pf6N2E2_5046	0.38	-0.3
5,822,168	-		Pf6N2E2_5046	0.38	+0.3
5,822,171	+		Pf6N2E2_5046	0.39	+1.2
5,822,171	+		Pf6N2E2_5046	0.39	+1.8
5,822,171	+		Pf6N2E2_5046	0.39	+1.5
5,822,172	-		Pf6N2E2_5046	0.39	+0.1
5,822,172	-		Pf6N2E2_5046	0.39	+0.4
5,822,172	-		Pf6N2E2_5046	0.39	+0.6