Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4443

Experiment: Vancomycin 0.24 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.24 mg/ml
5,173,801	-		Pf6N2E2_4441	0.85	-0.6
5,173,801	-		Pf6N2E2_4441	0.85	+0.7
5,173,801	-		Pf6N2E2_4441	0.85	+0.5
5,173,895	-				+1.1
5,173,895	-				+0.7
5,173,903	+				+0.4
5,173,904	-				+0.9
5,173,905	+				-0.4
5,173,905	+				-0.1
5,173,905	+				+0.2
5,173,905	+				-0.3
5,173,905	+				+0.4
5,173,905	+				+0.0
5,173,905	+				-0.4
5,173,905	+				+0.6
5,173,905	+				-1.7
5,173,906	-				-0.6
5,173,906	-				+0.0
5,173,906	-				+0.8
5,173,906	-				+1.2
5,173,906	-				-2.0
5,173,906	-				-1.0
5,174,020	+				+0.5
5,174,020	+				+0.3
5,174,020	+				+0.6
5,174,021	-				-0.3
5,174,021	-				-0.1
5,174,109	+				+0.4
5,174,109	+				+0.2
5,174,109	+				+0.6
5,174,110	-				+0.2
5,174,110	-				+0.4
5,174,110	-				-0.4
5,174,110	-				+2.3
5,174,110	-				-0.1
5,174,110	-				+0.3
5,174,110	-				-1.0
5,174,281	-		Pf6N2E2_4442	0.33	-0.4
5,174,281	-		Pf6N2E2_4442	0.33	+0.6
5,174,281	-		Pf6N2E2_4442	0.33	+0.6
5,174,340	+		Pf6N2E2_4442	0.40	+1.8
5,174,340	+		Pf6N2E2_4442	0.40	+1.6
5,174,340	+		Pf6N2E2_4442	0.40	+0.4
5,174,341	-		Pf6N2E2_4442	0.41	+0.3
5,174,341	-		Pf6N2E2_4442	0.41	+0.8
5,174,341	-		Pf6N2E2_4442	0.41	+0.3
5,174,412	+		Pf6N2E2_4442	0.50	-0.2
5,174,412	+		Pf6N2E2_4442	0.50	+0.0
5,174,413	-		Pf6N2E2_4442	0.50	-0.3
5,174,413	-		Pf6N2E2_4442	0.50	+1.7
5,174,460	+		Pf6N2E2_4442	0.57	-1.3
5,174,461	-		Pf6N2E2_4442	0.57	-0.2
5,174,461	-		Pf6N2E2_4442	0.57	+2.7
5,174,461	-		Pf6N2E2_4442	0.57	+0.7
5,174,488	-		Pf6N2E2_4442	0.60	+0.7
5,174,580	+		Pf6N2E2_4442	0.73	+0.3
5,174,580	+		Pf6N2E2_4442	0.73	-0.6
5,174,580	+		Pf6N2E2_4442	0.73	-2.0
5,174,580	+		Pf6N2E2_4442	0.73	+1.4
5,174,580	+		Pf6N2E2_4442	0.73	-0.6
5,174,580	+		Pf6N2E2_4442	0.73	+1.4
5,174,581	-		Pf6N2E2_4442	0.73	-0.4
5,174,581	-		Pf6N2E2_4442	0.73	-0.1
5,174,581	-		Pf6N2E2_4442	0.73	-0.4
5,174,581	-		Pf6N2E2_4442	0.73	+0.3
5,174,581	-		Pf6N2E2_4442	0.73	+0.0
5,174,581	-		Pf6N2E2_4442	0.73	+0.5
5,174,581	-		Pf6N2E2_4442	0.73	+0.8
5,174,581	-		Pf6N2E2_4442	0.73	+1.7
5,174,607	+		Pf6N2E2_4442	0.76	-0.2
5,174,608	-		Pf6N2E2_4442	0.76	+1.1
5,174,608	-		Pf6N2E2_4442	0.76	+0.1
5,174,632	-		Pf6N2E2_4442	0.80	-1.8
5,174,632	-		Pf6N2E2_4442	0.80	-0.5
5,174,632	-		Pf6N2E2_4442	0.80	+0.7
5,174,676	+		Pf6N2E2_4442	0.86	+0.5
5,174,676	+		Pf6N2E2_4442	0.86	+0.5
5,174,676	+		Pf6N2E2_4442	0.86	-1.4
5,174,676	+		Pf6N2E2_4442	0.86	-0.1
5,174,676	+		Pf6N2E2_4442	0.86	+0.2
5,174,676	+		Pf6N2E2_4442	0.86	-0.9
5,174,676	+		Pf6N2E2_4442	0.86	+0.2
5,174,676	+		Pf6N2E2_4442	0.86	-0.8
5,174,677	-		Pf6N2E2_4442	0.86	-0.3
5,174,677	-		Pf6N2E2_4442	0.86	+1.0
5,174,677	-		Pf6N2E2_4442	0.86	+1.4
5,174,677	-		Pf6N2E2_4442	0.86	+0.3
5,174,677	-		Pf6N2E2_4442	0.86	+0.4
5,174,677	-		Pf6N2E2_4442	0.86	-0.4
5,174,697	+		Pf6N2E2_4442	0.88	+0.1
5,174,768	+				+0.5
5,174,768	+				-0.6
5,174,769	-				-0.1
5,174,874	+		Pf6N2E2_4443	0.15	-0.1
5,174,874	+		Pf6N2E2_4443	0.15	-1.7
5,174,889	+		Pf6N2E2_4443	0.18	-0.8
5,174,889	+		Pf6N2E2_4443	0.18	+0.3
5,174,889	+		Pf6N2E2_4443	0.18	+0.6
5,174,890	-		Pf6N2E2_4443	0.18	+0.2
5,174,890	-		Pf6N2E2_4443	0.18	+0.4
5,174,890	-		Pf6N2E2_4443	0.18	+1.6
5,174,938	-		Pf6N2E2_4443	0.26	+0.7
5,174,938	-		Pf6N2E2_4443	0.26	+1.8
5,174,985	+		Pf6N2E2_4443	0.34	+0.4
5,175,097	+		Pf6N2E2_4443	0.53	-2.4
5,175,120	+		Pf6N2E2_4443	0.57	+1.0
5,175,120	+		Pf6N2E2_4443	0.57	+1.2
5,175,121	-		Pf6N2E2_4443	0.57	+1.9
5,175,121	-		Pf6N2E2_4443	0.57	-3.3
5,175,121	-		Pf6N2E2_4443	0.57	+0.8
5,175,121	-		Pf6N2E2_4443	0.57	+1.5
5,175,147	+		Pf6N2E2_4443	0.61	-0.2
5,175,148	-		Pf6N2E2_4443	0.62	-1.2
5,175,148	-		Pf6N2E2_4443	0.62	+0.4
5,175,279	+		Pf6N2E2_4443	0.84	+1.0
5,175,279	+		Pf6N2E2_4443	0.84	+1.1
5,175,280	-		Pf6N2E2_4443	0.84	+1.2
5,175,366	-				+0.3
5,175,366	-				-0.2
5,175,366	-				+0.0
5,175,423	+				-0.8
5,175,424	-				-0.5
5,175,441	+				-1.4
5,175,442	-				-0.0
5,175,469	+				+0.7
5,175,470	-				-1.1
5,175,479	-				+1.8
5,175,523	+				+0.2
5,175,523	+				+0.3
5,175,523	+				-0.1
5,175,583	-				+1.1
5,175,728	+		Pf6N2E2_4444	0.41	+0.9
5,175,731	+		Pf6N2E2_4444	0.42	+1.0
5,175,731	+		Pf6N2E2_4444	0.42	-1.8
5,175,731	+		Pf6N2E2_4444	0.42	+0.9
5,175,731	+		Pf6N2E2_4444	0.42	-2.4
5,175,731	+		Pf6N2E2_4444	0.42	+0.8
5,175,731	+		Pf6N2E2_4444	0.42	+1.4
5,175,732	-		Pf6N2E2_4444	0.42	+0.6
5,175,732	-		Pf6N2E2_4444	0.42	+0.8
5,175,732	-		Pf6N2E2_4444	0.42	+1.3
5,175,732	-		Pf6N2E2_4444	0.42	+0.0
5,175,732	-		Pf6N2E2_4444	0.42	+0.7
5,175,732	-		Pf6N2E2_4444	0.42	+0.9
5,175,732	-		Pf6N2E2_4444	0.42	+0.5
5,175,749	+		Pf6N2E2_4444	0.47	+0.4
5,175,749	+		Pf6N2E2_4444	0.47	+0.6
5,175,749	+		Pf6N2E2_4444	0.47	-0.6
5,175,749	+		Pf6N2E2_4444	0.47	+1.3
5,175,750	-		Pf6N2E2_4444	0.47	-0.6
5,175,750	-		Pf6N2E2_4444	0.47	+0.5
5,175,938	-				+0.7
5,175,965	+				+0.2
5,175,965	+				+0.9
5,175,966	-				+0.4
5,175,966	-				-0.3
5,175,966	-				+0.9
5,176,175	+		Pf6N2E2_4445	0.15	+1.0
5,176,175	+		Pf6N2E2_4445	0.15	+0.0
5,176,176	-		Pf6N2E2_4445	0.15	+2.2