Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3886

Experiment: Vancomycin 0.24 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.24 mg/ml
4,517,899	+				-1.1
4,517,899	+				-0.0
4,517,900	-				+0.5
4,517,900	-				-1.4
4,517,900	-				-0.5
4,518,038	-				-0.1
4,518,038	-				-1.0
4,518,064	+				+0.4
4,518,064	+				-2.4
4,518,064	+				+0.7
4,518,064	+				-1.0
4,518,065	-				-0.0
4,518,065	-				+1.1
4,518,111	+				+3.7
4,518,112	-				+2.2
4,518,112	-				+3.7
4,518,112	-				+2.3
4,518,190	+		Pf6N2E2_3885	0.18	+3.3
4,518,447	+		Pf6N2E2_3885	0.49	+1.3
4,518,448	-		Pf6N2E2_3885	0.49	+2.6
4,518,485	+		Pf6N2E2_3885	0.53	+4.1
4,518,838	+				+1.4
4,518,839	-				+2.4
4,518,914	-				+0.7
4,519,037	-		Pf6N2E2_3886	0.30	-0.0
4,519,078	+		Pf6N2E2_3886	0.37	+1.9
4,519,237	+		Pf6N2E2_3886	0.65	+3.7
4,519,237	+		Pf6N2E2_3886	0.65	+5.1
4,519,237	+		Pf6N2E2_3886	0.65	+2.8
4,519,238	-		Pf6N2E2_3886	0.65	+0.2
4,519,298	-		Pf6N2E2_3886	0.76	+0.3
4,519,327	+		Pf6N2E2_3886	0.81	+1.7
4,519,327	+		Pf6N2E2_3886	0.81	+4.3
4,519,327	+		Pf6N2E2_3886	0.81	+3.2
4,519,327	+		Pf6N2E2_3886	0.81	-2.4
4,519,327	+		Pf6N2E2_3886	0.81	+2.0
4,519,327	+		Pf6N2E2_3886	0.81	+2.9
4,519,327	+		Pf6N2E2_3886	0.81	+2.9
4,519,328	-		Pf6N2E2_3886	0.81	-0.1
4,519,328	-		Pf6N2E2_3886	0.81	-0.3
4,519,328	-		Pf6N2E2_3886	0.81	-0.2
4,519,328	-		Pf6N2E2_3886	0.81	-1.1
4,519,328	-		Pf6N2E2_3886	0.81	+0.6
4,519,328	-		Pf6N2E2_3886	0.81	-0.6
4,519,328	-		Pf6N2E2_3886	0.81	+1.4
4,519,328	-		Pf6N2E2_3886	0.81	+0.9
4,519,328	-		Pf6N2E2_3886	0.81	-0.0
4,519,328	-		Pf6N2E2_3886	0.81	+0.4
4,519,328	-		Pf6N2E2_3886	0.81	+1.5
4,519,413	+				+2.2
4,519,414	-				-0.1
4,519,414	-				+0.5
4,519,434	-				+1.5
4,519,463	+				+1.1
4,519,463	+				+1.1
4,519,463	+				+2.1
4,519,463	+				+1.2
4,519,463	+				+1.4
4,519,463	+				+2.3
4,519,464	-				-0.2
4,519,464	-				+1.0
4,519,464	-				+0.6
4,519,464	-				-0.6
4,519,464	-				-0.2
4,519,464	-				-1.4
4,519,465	+				-0.6
4,519,474	+				+1.3
4,519,522	-				-2.7
4,519,594	+		Pf6N2E2_3887	0.11	-2.4
4,519,594	+		Pf6N2E2_3887	0.11	-0.2
4,519,594	+		Pf6N2E2_3887	0.11	+0.2
4,519,594	+		Pf6N2E2_3887	0.11	+0.2
4,519,720	+		Pf6N2E2_3887	0.30	-0.5
4,519,720	+		Pf6N2E2_3887	0.30	-1.5
4,519,720	+		Pf6N2E2_3887	0.30	+1.5
4,519,721	-		Pf6N2E2_3887	0.30	-0.8
4,519,815	+		Pf6N2E2_3887	0.44	+1.6
4,519,816	-		Pf6N2E2_3887	0.44	-0.4
4,519,921	+		Pf6N2E2_3887	0.60	+0.9
4,519,922	-		Pf6N2E2_3887	0.60	+0.0
4,519,922	-		Pf6N2E2_3887	0.60	+0.2
4,519,951	+		Pf6N2E2_3887	0.65	+0.6
4,519,952	-		Pf6N2E2_3887	0.65	+0.6
4,520,153	+				+0.1
4,520,153	+				-0.4
4,520,153	+				-0.1
4,520,153	+				-0.2
4,520,153	+				+0.4
4,520,154	-				-0.2
4,520,154	-				-0.1
4,520,154	-				-0.4
4,520,154	-				-0.5
4,520,154	-				+0.9
4,520,154	-				-0.2
4,520,154	-				+0.3
4,520,312	+				+1.7
4,520,313	-				+0.5
4,520,316	+				-0.7
4,520,316	+				-0.1
4,520,316	+				+0.7
4,520,316	+				-0.2
4,520,316	+				-0.1
4,520,316	+				+0.2
4,520,316	+				+0.6
4,520,316	+				+0.7
4,520,317	-				-0.9
4,520,317	-				-0.5
4,520,317	-				-0.3
4,520,317	-				-0.5
4,520,317	-				-0.1
4,520,317	-				+0.3
4,520,317	-				+0.1
4,520,317	-				+1.1
4,520,317	-				+1.5
4,520,317	-				+0.0
4,520,317	-				-0.0
4,520,317	-				-0.2
4,520,386	+		Pf6N2E2_3888	0.19	-1.1
4,520,386	+		Pf6N2E2_3888	0.19	+0.2
4,520,386	+		Pf6N2E2_3888	0.19	-1.4
4,520,387	-		Pf6N2E2_3888	0.20	-0.9
4,520,387	-		Pf6N2E2_3888	0.20	+0.2
4,520,387	-		Pf6N2E2_3888	0.20	+0.8
4,520,387	-		Pf6N2E2_3888	0.20	-1.0
4,520,387	-		Pf6N2E2_3888	0.20	+0.7
4,520,387	-		Pf6N2E2_3888	0.20	-2.5