Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3821

Experiment: Vancomycin 0.24 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.24 mg/ml
4,455,993	-				+0.3
4,456,094	-				+1.1
4,456,115	+				+0.4
4,456,115	+				-2.8
4,456,116	-				-0.7
4,456,209	+		Pf6N2E2_3820	0.49	-0.5
4,456,230	+		Pf6N2E2_3820	0.59	+1.0
4,456,234	+		Pf6N2E2_3820	0.62	-0.6
4,456,234	+		Pf6N2E2_3820	0.62	-0.5
4,456,275	+		Pf6N2E2_3820	0.83	-1.1
4,457,688	+				+2.4
4,457,689	-				+1.1
4,457,758	-				-0.8
4,457,786	+				+0.2
4,457,786	+				-0.9
4,457,786	+				-0.9
4,457,786	+				+0.2
4,457,786	+				+0.2
4,457,787	-				+1.0
4,457,787	-				-0.4
4,457,787	-				+0.9
4,457,787	-				+1.1
4,457,788	+				-0.8
4,457,788	+				+0.4
4,457,788	+				+0.8
4,457,788	+				-0.9
4,457,788	+				-0.5
4,457,788	+				-1.9
4,457,788	+				-0.7
4,457,788	+				+0.7
4,457,788	+				-0.9
4,457,789	-				-0.4
4,457,789	-				-2.9
4,457,789	-				-0.7
4,457,789	-				-0.3
4,457,789	-				-0.1
4,457,789	-				-0.3
4,457,789	-				+0.6
4,457,789	-				+0.2
4,457,789	-				+0.5
4,457,789	-				+1.2
4,457,789	-				-0.2
4,457,789	-				-0.8
4,457,971	+		Pf6N2E2_3822	0.30	-1.1
4,457,971	+		Pf6N2E2_3822	0.30	+0.4
4,457,971	+		Pf6N2E2_3822	0.30	+0.2
4,457,971	+		Pf6N2E2_3822	0.30	+0.3
4,457,972	-		Pf6N2E2_3822	0.30	+0.2
4,458,038	+		Pf6N2E2_3822	0.41	+0.8
4,458,039	-		Pf6N2E2_3822	0.42	-0.7
4,458,039	-		Pf6N2E2_3822	0.42	+1.4
4,458,084	+		Pf6N2E2_3822	0.50	-0.4
4,458,084	+		Pf6N2E2_3822	0.50	+1.7
4,458,084	+		Pf6N2E2_3822	0.50	-1.4
4,458,085	-		Pf6N2E2_3822	0.50	+1.1
4,458,085	-		Pf6N2E2_3822	0.50	+1.4
4,458,085	-		Pf6N2E2_3822	0.50	-0.7
4,458,107	+		Pf6N2E2_3822	0.54	+0.3
4,458,107	+		Pf6N2E2_3822	0.54	+0.5
4,458,107	+		Pf6N2E2_3822	0.54	-1.2
4,458,107	+		Pf6N2E2_3822	0.54	+0.5
4,458,107	+		Pf6N2E2_3822	0.54	-0.0
4,458,108	-		Pf6N2E2_3822	0.54	-0.7
4,458,108	-		Pf6N2E2_3822	0.54	-0.9
4,458,108	-		Pf6N2E2_3822	0.54	+0.2
4,458,108	-		Pf6N2E2_3822	0.54	+0.2
4,458,108	-		Pf6N2E2_3822	0.54	+1.2
4,458,108	-		Pf6N2E2_3822	0.54	-0.1
4,458,108	-		Pf6N2E2_3822	0.54	-1.1
4,458,395	+				-1.3
4,458,395	+				+0.8
4,458,395	+				+0.5
4,458,396	-				+0.2
4,458,396	-				+0.7
4,458,432	+				-0.8
4,458,432	+				-0.2
4,458,432	+				+1.2
4,458,432	+				-0.9
4,458,432	+				+1.0
4,458,432	+				+1.9
4,458,433	-				-1.7
4,458,433	-				-0.4
4,458,433	-				-0.1
4,458,433	-				+0.1
4,458,433	-				+0.4
4,458,534	+		Pf6N2E2_3823	0.12	-1.3
4,458,534	+		Pf6N2E2_3823	0.12	-1.5
4,458,534	+		Pf6N2E2_3823	0.12	+0.3
4,458,534	+		Pf6N2E2_3823	0.12	+0.6
4,458,534	+		Pf6N2E2_3823	0.12	+1.3
4,458,534	+		Pf6N2E2_3823	0.12	-0.8
4,458,535	-		Pf6N2E2_3823	0.12	+1.5
4,458,535	-		Pf6N2E2_3823	0.12	+0.9
4,458,540	+		Pf6N2E2_3823	0.13	-0.2
4,458,540	+		Pf6N2E2_3823	0.13	-0.6
4,458,541	-		Pf6N2E2_3823	0.13	+0.2
4,458,541	-		Pf6N2E2_3823	0.13	+0.7
4,458,541	-		Pf6N2E2_3823	0.13	-0.8
4,458,541	-		Pf6N2E2_3823	0.13	+1.4
4,458,567	+		Pf6N2E2_3823	0.18	-0.4
4,458,567	+		Pf6N2E2_3823	0.18	+2.0
4,458,567	+		Pf6N2E2_3823	0.18	+0.6
4,458,567	+		Pf6N2E2_3823	0.18	+0.4
4,458,568	-		Pf6N2E2_3823	0.19	-0.3