Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3788

Experiment: Vancomycin 0.24 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.24 mg/ml
4,408,491	+				+1.2
4,408,491	+				+0.0
4,408,491	+				+2.4
4,408,491	+				+0.0
4,408,491	+				-1.2
4,408,491	+				+0.8
4,408,492	-				-0.8
4,408,492	-				+0.3
4,408,558	-				-0.4
4,408,576	+				+0.2
4,408,577	-				+0.3
4,408,591	+				+0.2
4,408,591	+				-0.5
4,408,591	+				-0.2
4,408,592	-				+0.6
4,408,592	-				-0.3
4,408,611	+				+0.2
4,408,611	+				-0.5
4,408,618	+				-0.4
4,408,619	-				+0.5
4,408,619	-				+0.3
4,408,619	-				+0.4
4,408,619	-				-1.0
4,408,619	-				+0.3
4,408,620	+				-0.1
4,408,621	-				+1.2
4,408,638	-				-0.1
4,408,787	+				-0.3
4,408,788	-				+0.1
4,408,809	-				+0.9
4,408,851	+		Pf6N2E2_3788	0.11	+0.2
4,408,998	+		Pf6N2E2_3788	0.18	+0.7
4,408,998	+		Pf6N2E2_3788	0.18	-0.9
4,408,998	+		Pf6N2E2_3788	0.18	-0.8
4,408,998	+		Pf6N2E2_3788	0.18	-1.9
4,408,999	-		Pf6N2E2_3788	0.19	+0.3
4,408,999	-		Pf6N2E2_3788	0.19	-0.8
4,408,999	-		Pf6N2E2_3788	0.19	-1.5
4,409,208	+		Pf6N2E2_3788	0.29	+0.1
4,409,208	+		Pf6N2E2_3788	0.29	+1.7
4,409,208	+		Pf6N2E2_3788	0.29	+0.1
4,409,209	-		Pf6N2E2_3788	0.29	-1.5
4,409,209	-		Pf6N2E2_3788	0.29	-1.3
4,409,293	+		Pf6N2E2_3788	0.34	-1.5
4,409,640	-		Pf6N2E2_3788	0.52	-0.8
4,410,541	+				+0.7
4,410,541	+				-0.0
4,410,542	-				-0.0
4,410,542	-				+0.7
4,410,542	-				+0.1
4,410,559	-				+1.5
4,410,573	+				-0.5
4,410,573	+				+0.9
4,410,574	-				+0.4
4,410,574	-				-0.4
4,410,577	-				+0.0
4,410,577	-				+0.4
4,410,624	+				+2.2
4,410,636	+				-0.4
4,410,636	+				+0.5
4,410,636	+				+0.1
4,410,636	+				+1.1
4,410,636	+				-0.9
4,410,637	-				+1.4
4,410,637	-				+0.5
4,410,637	-				-0.0
4,410,637	-				+1.6
4,410,637	-				+1.2
4,410,637	-				-2.2
4,410,637	-				-0.2
4,410,637	-				-0.4
4,410,643	+				-0.9
4,410,644	-				+0.2
4,410,669	+				-1.0
4,410,669	+				-1.9
4,410,670	-				+1.2
4,410,670	-				-2.1
4,410,670	-				-0.6
4,410,683	+				-0.7
4,410,704	+				+0.7
4,410,705	-				-0.3
4,410,724	+				-1.0
4,410,724	+				-0.4
4,410,724	+				+0.5
4,410,725	-				-1.9
4,410,728	+				+0.8
4,410,728	+				+0.9
4,410,728	+				-2.5
4,410,729	-				+0.6
4,410,729	-				-1.1
4,410,729	-				+0.9
4,410,729	-				-0.3
4,410,729	-				+0.2
4,410,729	-				+0.3
4,410,733	+				-0.3
4,410,733	+				-0.3
4,410,733	+				-1.1
4,410,734	-				-0.3
4,410,734	-				+0.1
4,410,734	-				+0.6
4,410,734	-				+0.4
4,410,906	+		Pf6N2E2_3789	0.10	+0.7
4,410,907	-		Pf6N2E2_3789	0.10	+0.3
4,410,907	-		Pf6N2E2_3789	0.10	+0.1
4,410,907	-		Pf6N2E2_3789	0.10	+0.7
4,410,907	-		Pf6N2E2_3789	0.10	+1.1
4,410,907	-		Pf6N2E2_3789	0.10	+1.1
4,410,907	-		Pf6N2E2_3789	0.10	-1.1
4,410,907	-		Pf6N2E2_3789	0.10	+0.1
4,411,054	-		Pf6N2E2_3789	0.18	-0.2
4,411,160	-		Pf6N2E2_3789	0.24	-0.6
4,411,243	-		Pf6N2E2_3789	0.28	-1.1
4,411,257	+		Pf6N2E2_3789	0.29	+0.8
4,411,259	+		Pf6N2E2_3789	0.29	+1.1
4,411,259	+		Pf6N2E2_3789	0.29	-0.3
4,411,259	+		Pf6N2E2_3789	0.29	+2.7
4,411,260	-		Pf6N2E2_3789	0.29	+3.1
4,411,260	-		Pf6N2E2_3789	0.29	+0.1
4,411,260	-		Pf6N2E2_3789	0.29	-0.1
4,411,260	-		Pf6N2E2_3789	0.29	+2.0
4,411,260	-		Pf6N2E2_3789	0.29	+0.6
4,411,260	-		Pf6N2E2_3789	0.29	-1.2
4,411,263	+		Pf6N2E2_3789	0.29	-1.0
4,411,264	-		Pf6N2E2_3789	0.29	-1.0
4,411,264	-		Pf6N2E2_3789	0.29	-0.5
4,411,264	-		Pf6N2E2_3789	0.29	+0.0
4,411,264	-		Pf6N2E2_3789	0.29	+0.7
4,411,264	-		Pf6N2E2_3789	0.29	-0.0
4,411,264	-		Pf6N2E2_3789	0.29	+0.0
4,411,264	-		Pf6N2E2_3789	0.29	+0.8
4,411,401	+		Pf6N2E2_3789	0.36	+0.1
4,411,483	+		Pf6N2E2_3789	0.41	+0.1
4,411,483	+		Pf6N2E2_3789	0.41	-0.2
4,411,483	+		Pf6N2E2_3789	0.41	-0.5
4,411,483	+		Pf6N2E2_3789	0.41	-0.2
4,411,484	-		Pf6N2E2_3789	0.41	+0.5
4,411,484	-		Pf6N2E2_3789	0.41	+0.9
4,411,484	-		Pf6N2E2_3789	0.41	+1.4
4,411,484	-		Pf6N2E2_3789	0.41	+0.5