Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3586

Experiment: Vancomycin 0.24 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.24 mg/ml
4,176,933	-		Pf6N2E2_3585	0.24	+0.4
4,176,963	+		Pf6N2E2_3585	0.26	-0.9
4,176,963	+		Pf6N2E2_3585	0.26	+0.1
4,176,963	+		Pf6N2E2_3585	0.26	+0.1
4,176,963	+		Pf6N2E2_3585	0.26	-0.8
4,176,963	+		Pf6N2E2_3585	0.26	-0.1
4,176,963	+		Pf6N2E2_3585	0.26	+0.3
4,176,963	+		Pf6N2E2_3585	0.26	+0.0
4,176,964	-		Pf6N2E2_3585	0.27	-0.5
4,176,964	-		Pf6N2E2_3585	0.27	+0.2
4,177,392	-		Pf6N2E2_3585	0.61	+0.4
4,177,645	+		Pf6N2E2_3585	0.82	+0.6
4,177,646	-		Pf6N2E2_3585	0.82	-0.5
4,177,696	-		Pf6N2E2_3585	0.86	-1.7
4,177,696	-		Pf6N2E2_3585	0.86	+1.3
4,177,696	-		Pf6N2E2_3585	0.86	-2.0
4,177,717	+		Pf6N2E2_3585	0.88	-0.5
4,177,805	+				+2.5
4,177,805	+				+0.2
4,177,805	+				-0.3
4,177,805	+				-0.1
4,177,806	-				+0.5
4,177,827	+				+0.2
4,177,827	+				-0.7
4,177,828	-				-0.5
4,177,879	+				-1.0
4,177,970	+		Pf6N2E2_3586	0.12	-0.3
4,177,971	-		Pf6N2E2_3586	0.12	-1.5
4,178,106	+		Pf6N2E2_3586	0.29	-1.4
4,178,106	+		Pf6N2E2_3586	0.29	-1.2
4,178,297	+		Pf6N2E2_3586	0.52	-1.2
4,178,297	+		Pf6N2E2_3586	0.52	-1.1
4,178,315	+		Pf6N2E2_3586	0.54	+0.7
4,178,315	+		Pf6N2E2_3586	0.54	-0.6
4,178,315	+		Pf6N2E2_3586	0.54	-2.2
4,178,316	-		Pf6N2E2_3586	0.54	-2.4
4,178,328	+		Pf6N2E2_3586	0.55	-2.4
4,178,328	+		Pf6N2E2_3586	0.55	-0.2
4,178,328	+		Pf6N2E2_3586	0.55	+0.1
4,178,328	+		Pf6N2E2_3586	0.55	-1.5
4,178,328	+		Pf6N2E2_3586	0.55	-2.7
4,178,328	+		Pf6N2E2_3586	0.55	-1.6
4,178,329	-		Pf6N2E2_3586	0.56	-1.5
4,178,329	-		Pf6N2E2_3586	0.56	-0.1
4,178,329	-		Pf6N2E2_3586	0.56	+0.8
4,178,580	+		Pf6N2E2_3586	0.86	-1.7
4,178,580	+		Pf6N2E2_3586	0.86	+0.2
4,178,580	+		Pf6N2E2_3586	0.86	-0.9
4,178,581	-		Pf6N2E2_3586	0.86	-0.8
4,178,652	+				-1.8
4,178,652	+				+0.3
4,178,699	-				-1.0
4,178,799	+				-0.5
4,178,981	-				+0.7
4,179,080	+		Pf6N2E2_3587	0.14	-0.1
4,179,081	-		Pf6N2E2_3587	0.15	+0.5
4,179,188	+		Pf6N2E2_3587	0.38	-0.1
4,179,188	+		Pf6N2E2_3587	0.38	-1.5
4,179,188	+		Pf6N2E2_3587	0.38	-0.3
4,179,188	+		Pf6N2E2_3587	0.38	+0.4
4,179,189	-		Pf6N2E2_3587	0.39	+0.7
4,179,189	-		Pf6N2E2_3587	0.39	-0.9
4,179,440	-				-0.6
4,179,534	+				-0.2
4,179,564	+				+2.1
4,179,564	+				-0.2
4,179,571	-				-1.3
4,179,571	-				-0.9
4,179,618	+				+1.5
4,179,619	-				-1.1
4,179,619	-				+0.7
4,179,619	-				-3.1
4,179,619	-				+0.5
4,179,673	+		Pf6N2E2_3588	0.49	+1.2
4,179,673	+		Pf6N2E2_3588	0.49	-0.7
4,179,674	-		Pf6N2E2_3588	0.49	-0.4