Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3556

Experiment: Vancomycin 0.24 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.24 mg/ml
4,145,454	+		Pf6N2E2_3554	0.49	+0.2
4,145,454	+		Pf6N2E2_3554	0.49	+0.3
4,145,455	-		Pf6N2E2_3554	0.50	-1.3
4,145,458	+		Pf6N2E2_3554	0.50	+0.7
4,145,458	+		Pf6N2E2_3554	0.50	+0.6
4,145,458	+		Pf6N2E2_3554	0.50	+0.1
4,145,458	+		Pf6N2E2_3554	0.50	-1.2
4,145,458	+		Pf6N2E2_3554	0.50	+0.5
4,145,458	+		Pf6N2E2_3554	0.50	-0.5
4,145,458	+		Pf6N2E2_3554	0.50	-0.4
4,145,458	+		Pf6N2E2_3554	0.50	+0.3
4,145,458	+		Pf6N2E2_3554	0.50	+0.1
4,145,459	-		Pf6N2E2_3554	0.50	+0.9
4,145,459	-		Pf6N2E2_3554	0.50	-0.2
4,145,459	-		Pf6N2E2_3554	0.50	-0.5
4,145,728	+				-2.5
4,145,728	+				+0.1
4,145,728	+				-0.6
4,145,728	+				+0.1
4,145,729	-				-0.0
4,145,873	+		Pf6N2E2_3555	0.27	-0.2
4,145,873	+		Pf6N2E2_3555	0.27	-0.3
4,145,873	+		Pf6N2E2_3555	0.27	+1.3
4,146,016	-		Pf6N2E2_3555	0.54	+1.1
4,146,016	-		Pf6N2E2_3555	0.54	-0.7
4,146,016	-		Pf6N2E2_3555	0.54	-0.4
4,146,016	-		Pf6N2E2_3555	0.54	+1.0
4,146,110	+		Pf6N2E2_3555	0.71	+0.6
4,146,110	-		Pf6N2E2_3555	0.71	-0.2
4,146,111	-		Pf6N2E2_3555	0.72	+0.0
4,146,111	-		Pf6N2E2_3555	0.72	-0.1
4,146,150	-		Pf6N2E2_3555	0.79	-0.4
4,146,165	-		Pf6N2E2_3555	0.82	-1.4
4,146,216	-				+0.1
4,146,233	+				+0.6
4,146,233	+				+0.3
4,146,233	+				-1.9
4,146,234	-				+0.2
4,146,234	-				+0.1
4,146,234	-				-0.5
4,146,237	-				-0.5
4,146,237	-				-2.8
4,146,324	+				+0.4
4,146,325	-				+0.5
4,146,730	+		Pf6N2E2_3556	0.22	-2.2
4,146,731	-		Pf6N2E2_3556	0.22	-0.8
4,146,820	+		Pf6N2E2_3556	0.26	+0.2
4,147,420	+		Pf6N2E2_3556	0.54	+1.3
4,147,516	+		Pf6N2E2_3556	0.58	+0.5
4,147,516	+		Pf6N2E2_3556	0.58	+0.6
4,147,516	+		Pf6N2E2_3556	0.58	+0.1
4,147,517	-		Pf6N2E2_3556	0.58	-1.0
4,147,583	+		Pf6N2E2_3556	0.62	-0.1
4,147,583	+		Pf6N2E2_3556	0.62	+0.4
4,147,583	+		Pf6N2E2_3556	0.62	+0.2
4,147,583	+		Pf6N2E2_3556	0.62	-0.3
4,147,584	-		Pf6N2E2_3556	0.62	+0.9
4,147,584	-		Pf6N2E2_3556	0.62	-0.9
4,147,584	-		Pf6N2E2_3556	0.62	+0.5
4,147,584	-		Pf6N2E2_3556	0.62	-0.3
4,147,912	+		Pf6N2E2_3556	0.77	-0.4
4,147,912	+		Pf6N2E2_3556	0.77	-0.2
4,147,912	+		Pf6N2E2_3556	0.77	-0.7
4,147,912	+		Pf6N2E2_3556	0.77	+1.0
4,147,913	-		Pf6N2E2_3556	0.77	+0.4
4,147,924	+		Pf6N2E2_3556	0.77	-0.3
4,147,924	+		Pf6N2E2_3556	0.77	-0.3
4,147,924	+		Pf6N2E2_3556	0.77	+1.0
4,147,924	+		Pf6N2E2_3556	0.77	+0.2
4,147,924	+		Pf6N2E2_3556	0.77	-0.4
4,147,925	-		Pf6N2E2_3556	0.77	-1.3
4,147,925	-		Pf6N2E2_3556	0.77	+0.0
4,147,925	-		Pf6N2E2_3556	0.77	-0.4
4,147,925	-		Pf6N2E2_3556	0.77	-0.9
4,147,925	-		Pf6N2E2_3556	0.77	-0.1
4,147,925	-		Pf6N2E2_3556	0.77	+0.2
4,148,293	+				+0.5
4,148,294	-				+0.4
4,148,294	-				-3.1
4,148,326	+				-0.8
4,148,326	+				-0.7
4,148,326	+				-0.1
4,148,326	+				+0.8
4,148,327	-				+2.6
4,148,327	-				+1.1
4,148,327	-				+0.4
4,148,327	-				-1.2
4,148,395	+				-0.2
4,148,550	+				-0.8
4,148,550	+				+1.2
4,148,551	-				+0.1
4,148,551	-				+0.7
4,148,551	-				+1.3
4,148,551	-				-0.4
4,148,551	-				+0.2
4,148,580	+				+0.9
4,148,580	+				+0.3
4,148,581	-				+2.1
4,148,581	-				+0.8
4,148,581	-				-0.3
4,148,610	+				-0.2
4,148,611	-				-0.7
4,148,611	-				-0.2
4,148,611	-				+2.1
4,148,766	+		Pf6N2E2_3557	0.52	+0.6
4,148,767	-		Pf6N2E2_3557	0.53	+0.1
4,148,931	-				-0.1
4,148,990	+				+1.1
4,148,991	-				+0.7
4,149,091	+				+1.3
4,149,091	+				-0.1
4,149,091	+				-0.1