Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3410

Experiment: Vancomycin 0.24 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.24 mg/ml
3,953,276	-				-0.1
3,953,324	+				+0.4
3,953,324	+				-0.8
3,953,324	+				+0.1
3,953,325	-				+0.5
3,953,325	-				+0.3
3,953,357	+				+1.4
3,953,357	+				+0.6
3,953,357	+				-0.4
3,953,357	+				-0.6
3,953,357	+				+0.3
3,953,357	+				-1.4
3,953,357	+				-1.1
3,953,357	+				+0.3
3,953,357	+				-0.1
3,953,357	+				+0.3
3,953,358	-				-0.6
3,953,358	-				+1.1
3,953,358	-				+2.1
3,953,358	-				-0.6
3,953,358	-				+1.2
3,953,358	-				+0.6
3,953,358	-				-1.7
3,953,445	-		Pf6N2E2_3409	0.15	-0.2
3,953,531	+		Pf6N2E2_3409	0.24	-0.3
3,953,636	+		Pf6N2E2_3409	0.35	+0.6
3,953,636	+		Pf6N2E2_3409	0.35	+0.3
3,953,637	-		Pf6N2E2_3409	0.35	-0.3
3,953,744	+		Pf6N2E2_3409	0.46	+1.0
3,953,744	+		Pf6N2E2_3409	0.46	+1.5
3,953,744	+		Pf6N2E2_3409	0.46	+1.0
3,953,745	-		Pf6N2E2_3409	0.47	+0.2
3,953,745	-		Pf6N2E2_3409	0.47	+0.5
3,953,828	+		Pf6N2E2_3409	0.55	+1.2
3,953,855	+		Pf6N2E2_3409	0.58	-0.1
3,953,855	+		Pf6N2E2_3409	0.58	+0.6
3,953,855	+		Pf6N2E2_3409	0.58	-1.1
3,953,855	+		Pf6N2E2_3409	0.58	+1.3
3,953,855	+		Pf6N2E2_3409	0.58	-0.3
3,953,855	+		Pf6N2E2_3409	0.58	-0.2
3,953,856	-		Pf6N2E2_3409	0.58	-0.9
3,953,856	-		Pf6N2E2_3409	0.58	-2.0
3,953,856	-		Pf6N2E2_3409	0.58	+0.1
3,953,856	-		Pf6N2E2_3409	0.58	-1.9
3,953,856	-		Pf6N2E2_3409	0.58	+0.8
3,953,856	-		Pf6N2E2_3409	0.58	+0.1
3,953,856	-		Pf6N2E2_3409	0.58	+0.0
3,953,908	+		Pf6N2E2_3409	0.64	+0.1
3,953,909	-		Pf6N2E2_3409	0.64	+1.0
3,953,909	-		Pf6N2E2_3409	0.64	+0.5
3,953,909	-		Pf6N2E2_3409	0.64	+1.9
3,953,943	+		Pf6N2E2_3409	0.68	+0.3
3,953,943	+		Pf6N2E2_3409	0.68	+0.9
3,953,943	+		Pf6N2E2_3409	0.68	-1.3
3,953,943	+		Pf6N2E2_3409	0.68	-0.5
3,953,944	-		Pf6N2E2_3409	0.68	-0.7
3,953,944	-		Pf6N2E2_3409	0.68	-0.2
3,953,945	+		Pf6N2E2_3409	0.68	+0.8
3,953,945	+		Pf6N2E2_3409	0.68	-1.5
3,953,945	+		Pf6N2E2_3409	0.68	-0.9
3,953,945	+		Pf6N2E2_3409	0.68	+0.7
3,953,945	+		Pf6N2E2_3409	0.68	-0.1
3,953,945	+		Pf6N2E2_3409	0.68	+1.4
3,953,945	+		Pf6N2E2_3409	0.68	-1.5
3,953,945	+		Pf6N2E2_3409	0.68	+0.5
3,953,945	+		Pf6N2E2_3409	0.68	+0.6
3,953,945	+		Pf6N2E2_3409	0.68	-0.1
3,953,945	+		Pf6N2E2_3409	0.68	-0.9
3,953,946	-		Pf6N2E2_3409	0.68	-0.3
3,953,946	-		Pf6N2E2_3409	0.68	-0.5
3,953,946	-		Pf6N2E2_3409	0.68	+0.5
3,953,946	-		Pf6N2E2_3409	0.68	-0.5
3,953,946	-		Pf6N2E2_3409	0.68	+0.7
3,953,946	-		Pf6N2E2_3409	0.68	+1.5
3,953,946	-		Pf6N2E2_3409	0.68	+0.5
3,954,020	+		Pf6N2E2_3409	0.76	-0.8
3,954,036	-		Pf6N2E2_3409	0.78	-0.2
3,954,036	-		Pf6N2E2_3409	0.78	-1.4
3,954,036	-		Pf6N2E2_3409	0.78	-0.9
3,954,041	+		Pf6N2E2_3409	0.78	+0.2
3,954,041	+		Pf6N2E2_3409	0.78	+0.4
3,954,042	-		Pf6N2E2_3409	0.78	+0.4
3,954,042	-		Pf6N2E2_3409	0.78	+0.7
3,954,104	+		Pf6N2E2_3409	0.85	+0.2
3,954,104	+		Pf6N2E2_3409	0.85	-1.8
3,954,104	+		Pf6N2E2_3409	0.85	-0.4
3,954,105	-		Pf6N2E2_3409	0.85	+0.6
3,954,105	-		Pf6N2E2_3409	0.85	+0.3
3,954,105	-		Pf6N2E2_3409	0.85	+0.4
3,954,151	+		Pf6N2E2_3409	0.90	+2.0
3,954,151	+		Pf6N2E2_3409	0.90	-1.2
3,954,151	+		Pf6N2E2_3409	0.90	+0.1
3,954,152	-		Pf6N2E2_3409	0.90	-0.7
3,954,152	-		Pf6N2E2_3409	0.90	-0.1
3,954,152	-		Pf6N2E2_3409	0.90	-0.3
3,954,152	-		Pf6N2E2_3409	0.90	+0.9
3,954,176	+				+0.7
3,954,176	+				-0.3
3,954,176	+				-1.4
3,954,177	-				+2.6
3,954,337	-				+0.1
3,954,500	+		Pf6N2E2_3410	0.27	-0.3
3,954,657	-		Pf6N2E2_3410	0.46	-1.4
3,954,657	-		Pf6N2E2_3410	0.46	-0.5
3,954,657	-		Pf6N2E2_3410	0.46	+0.5
3,954,657	-		Pf6N2E2_3410	0.46	-0.2
3,954,659	+		Pf6N2E2_3410	0.47	-1.0
3,954,659	+		Pf6N2E2_3410	0.47	-1.6
3,954,660	-		Pf6N2E2_3410	0.47	-0.2
3,954,660	-		Pf6N2E2_3410	0.47	+0.6
3,954,711	+		Pf6N2E2_3410	0.53	-0.5
3,954,711	+		Pf6N2E2_3410	0.53	-0.9
3,955,121	+				-0.5
3,955,121	+				+0.3
3,955,122	-				+0.1
3,955,138	-				+0.5
3,955,160	+		Pf6N2E2_3411	0.21	-0.0
3,955,161	-		Pf6N2E2_3411	0.22	+0.0
3,955,161	-		Pf6N2E2_3411	0.22	-0.5
3,955,161	-		Pf6N2E2_3411	0.22	+0.0
3,955,161	-		Pf6N2E2_3411	0.22	-0.3
3,955,187	+		Pf6N2E2_3411	0.43	-0.3
3,955,187	+		Pf6N2E2_3411	0.43	+0.2
3,955,188	-		Pf6N2E2_3411	0.44	+0.1
3,955,193	+		Pf6N2E2_3411	0.48	-0.1
3,955,193	+		Pf6N2E2_3411	0.48	+0.4
3,955,193	+		Pf6N2E2_3411	0.48	-0.1
3,955,193	+		Pf6N2E2_3411	0.48	-1.3
3,955,194	-		Pf6N2E2_3411	0.48	-0.1
3,955,490	-		Pf6N2E2_3412	0.41	+0.7
3,955,555	+		Pf6N2E2_3412	0.52	-0.1
3,955,555	+		Pf6N2E2_3412	0.52	+0.8
3,955,556	-		Pf6N2E2_3412	0.53	-0.1
3,955,640	+		Pf6N2E2_3412	0.68	+0.1
3,955,640	+		Pf6N2E2_3412	0.68	+0.2
3,955,641	-		Pf6N2E2_3412	0.68	-2.5
3,955,689	-		Pf6N2E2_3412	0.77	-1.4
3,955,724	+		Pf6N2E2_3412	0.83	-1.9
3,955,725	-		Pf6N2E2_3412	0.83	+1.0
3,955,752	+		Pf6N2E2_3412	0.88	-0.2
3,955,752	+		Pf6N2E2_3412	0.88	+0.8
3,955,752	+		Pf6N2E2_3412	0.88	+0.5
3,955,753	-		Pf6N2E2_3412	0.88	-2.0
3,955,792	+				+0.5
3,955,793	-				-1.4
3,955,817	-				-0.3