Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2212

Experiment: Vancomycin 0.24 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.24 mg/ml
2,619,727	+		Pf6N2E2_2211	0.20	+0.4
2,619,728	-		Pf6N2E2_2211	0.21	+1.6
2,619,835	+		Pf6N2E2_2211	0.30	+0.4
2,619,835	+		Pf6N2E2_2211	0.30	+1.6
2,619,835	+		Pf6N2E2_2211	0.30	+3.4
2,619,836	-		Pf6N2E2_2211	0.30	+3.0
2,619,836	-		Pf6N2E2_2211	0.30	+1.6
2,619,836	-		Pf6N2E2_2211	0.30	+2.1
2,619,982	+		Pf6N2E2_2211	0.43	+0.4
2,620,102	+		Pf6N2E2_2211	0.54	+0.7
2,620,102	+		Pf6N2E2_2211	0.54	+1.4
2,620,102	+		Pf6N2E2_2211	0.54	+1.5
2,620,103	-		Pf6N2E2_2211	0.54	+1.6
2,620,103	-		Pf6N2E2_2211	0.54	+0.4
2,620,103	-		Pf6N2E2_2211	0.54	+1.4
2,620,103	-		Pf6N2E2_2211	0.54	+1.7
2,620,103	-		Pf6N2E2_2211	0.54	+1.9
2,620,378	+		Pf6N2E2_2211	0.78	+1.5
2,620,380	+		Pf6N2E2_2211	0.78	+0.8
2,620,380	+		Pf6N2E2_2211	0.78	+1.9
2,620,380	+		Pf6N2E2_2211	0.78	+2.9
2,620,381	-		Pf6N2E2_2211	0.78	+1.1
2,620,381	-		Pf6N2E2_2211	0.78	+1.5
2,620,381	-		Pf6N2E2_2211	0.78	+2.6
2,620,679	+				+0.5
2,620,679	+				+0.0
2,620,679	+				+0.6
2,620,679	+				+0.3
2,620,680	-				-1.5
2,620,680	-				+0.4
2,620,794	+		Pf6N2E2_2212	0.15	+0.9
2,620,794	+		Pf6N2E2_2212	0.15	-0.3
2,620,795	-		Pf6N2E2_2212	0.15	+1.2
2,620,963	-		Pf6N2E2_2212	0.31	+0.4
2,620,974	+		Pf6N2E2_2212	0.32	+1.6
2,620,975	-		Pf6N2E2_2212	0.32	+0.0
2,621,028	+		Pf6N2E2_2212	0.38	+0.1
2,621,029	-		Pf6N2E2_2212	0.38	+1.4
2,621,029	-		Pf6N2E2_2212	0.38	+0.1
2,621,043	+		Pf6N2E2_2212	0.39	+0.7
2,621,044	-		Pf6N2E2_2212	0.39	+3.4
2,621,052	+		Pf6N2E2_2212	0.40	+2.1
2,621,052	+		Pf6N2E2_2212	0.40	+0.2
2,621,166	+		Pf6N2E2_2212	0.51	+0.4
2,621,166	+		Pf6N2E2_2212	0.51	-0.0
2,621,167	-		Pf6N2E2_2212	0.51	-3.3
2,621,167	-		Pf6N2E2_2212	0.51	+1.3
2,621,167	-		Pf6N2E2_2212	0.51	+1.3
2,621,167	-		Pf6N2E2_2212	0.51	+0.9
2,621,167	-		Pf6N2E2_2212	0.51	+0.3
2,621,526	+		Pf6N2E2_2212	0.86	+0.7
2,621,526	+		Pf6N2E2_2212	0.86	+0.7
2,621,526	+		Pf6N2E2_2212	0.86	-0.5
2,621,527	-		Pf6N2E2_2212	0.86	+1.1
2,621,527	-		Pf6N2E2_2212	0.86	+1.2
2,621,527	-		Pf6N2E2_2212	0.86	+0.8
2,621,527	-		Pf6N2E2_2212	0.86	+1.3
2,621,527	-		Pf6N2E2_2212	0.86	+1.8
2,621,527	-		Pf6N2E2_2212	0.86	+2.2
2,621,527	-		Pf6N2E2_2212	0.86	-0.7
2,621,527	-		Pf6N2E2_2212	0.86	+1.2
2,621,527	-		Pf6N2E2_2212	0.86	+1.9
2,621,530	+		Pf6N2E2_2212	0.87	+1.9
2,621,531	-		Pf6N2E2_2212	0.87	+1.4
2,621,531	-		Pf6N2E2_2212	0.87	+1.6
2,621,565	+				+0.6
2,621,565	+				+0.0
2,621,565	+				+1.3
2,621,566	-				+1.8
2,621,569	+				+0.9
2,621,569	+				+1.0
2,621,649	-				+0.6
2,621,683	+				-0.5
2,621,684	-				+0.9
2,621,692	-				+0.3
2,621,692	-				+1.6
2,621,692	-				+1.6
2,621,700	+				+2.5
2,621,700	+				+2.9
2,621,700	+				+1.0
2,621,701	-				+1.2
2,621,701	-				+1.0
2,621,717	+				+1.4
2,621,718	-				+0.8
2,621,718	-				+1.4
2,621,718	-				+2.1
2,621,718	-				+0.8
2,621,718	-				+2.3
2,621,718	-				+2.6
2,621,762	+				+1.9
2,621,763	-				+1.1
2,621,772	-				+2.4
2,621,792	+				+3.3
2,621,803	+				+2.6
2,621,803	+				+2.7
2,621,803	+				+1.7
2,621,803	+				+2.6
2,621,804	-				+0.7
2,621,804	-				+0.7
2,621,804	-				+1.8
2,621,857	+				+1.4
2,621,857	+				+1.8
2,621,868	+				+2.3
2,621,868	+				+2.3
2,621,868	+				+2.5
2,621,869	-				+2.0
2,621,875	-				+1.2
2,621,902	+				+1.6
2,621,903	-				+2.7
2,621,927	+				+1.4
2,621,928	-				+1.9
2,621,928	-				+1.2
2,621,928	-				+1.7
2,621,934	+				+2.3
2,622,367	+		Pf6N2E2_2213	0.45	+4.3
2,622,367	+		Pf6N2E2_2213	0.45	+4.0
2,622,367	+		Pf6N2E2_2213	0.45	+4.7
2,622,367	+		Pf6N2E2_2213	0.45	+5.9
2,622,368	-		Pf6N2E2_2213	0.45	+4.8
2,622,368	-		Pf6N2E2_2213	0.45	+3.7
2,622,368	-		Pf6N2E2_2213	0.45	+5.0
2,622,658	+		Pf6N2E2_2213	0.78	+3.2
2,622,659	-		Pf6N2E2_2213	0.78	+6.3
2,622,659	-		Pf6N2E2_2213	0.78	+4.7
2,622,659	-		Pf6N2E2_2213	0.78	+3.9