Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2154

Experiment: Vancomycin 0.24 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.24 mg/ml
2,558,120	+				-2.5
2,558,170	+				+0.4
2,558,262	+		Pf6N2E2_2153	0.18	+0.4
2,558,263	-		Pf6N2E2_2153	0.18	+0.4
2,558,263	-		Pf6N2E2_2153	0.18	+0.5
2,558,263	-		Pf6N2E2_2153	0.18	+1.8
2,558,263	-		Pf6N2E2_2153	0.18	+0.1
2,558,277	+		Pf6N2E2_2153	0.19	+2.2
2,558,278	-		Pf6N2E2_2153	0.19	-0.3
2,558,347	-		Pf6N2E2_2153	0.27	-0.5
2,558,355	+		Pf6N2E2_2153	0.27	+1.2
2,558,356	-		Pf6N2E2_2153	0.28	-0.7
2,558,361	+		Pf6N2E2_2153	0.28	+1.4
2,558,361	+		Pf6N2E2_2153	0.28	+1.9
2,558,361	+		Pf6N2E2_2153	0.28	-1.7
2,558,361	+		Pf6N2E2_2153	0.28	-1.7
2,558,362	-		Pf6N2E2_2153	0.28	+0.2
2,558,362	-		Pf6N2E2_2153	0.28	+1.9
2,558,362	-		Pf6N2E2_2153	0.28	-0.8
2,558,362	-		Pf6N2E2_2153	0.28	+0.7
2,558,362	-		Pf6N2E2_2153	0.28	+0.3
2,558,362	-		Pf6N2E2_2153	0.28	+0.2
2,558,397	+		Pf6N2E2_2153	0.32	-1.0
2,558,397	+		Pf6N2E2_2153	0.32	+0.7
2,558,398	-		Pf6N2E2_2153	0.32	-1.1
2,558,550	+		Pf6N2E2_2153	0.48	-2.8
2,558,550	+		Pf6N2E2_2153	0.48	-0.8
2,558,550	+		Pf6N2E2_2153	0.48	-1.6
2,558,551	-		Pf6N2E2_2153	0.48	+0.9
2,558,551	-		Pf6N2E2_2153	0.48	+0.6
2,558,551	-		Pf6N2E2_2153	0.48	+2.0
2,558,551	-		Pf6N2E2_2153	0.48	+0.3
2,558,551	-				-0.1
2,558,551	-		Pf6N2E2_2153	0.48	+0.3
2,558,572	-		Pf6N2E2_2153	0.50	+0.6
2,558,572	-		Pf6N2E2_2153	0.50	-1.6
2,558,572	-		Pf6N2E2_2153	0.50	-0.5
2,558,613	+		Pf6N2E2_2153	0.55	+0.3
2,558,673	+		Pf6N2E2_2153	0.61	+0.2
2,558,674	-		Pf6N2E2_2153	0.61	-0.7
2,558,674	-		Pf6N2E2_2153	0.61	+1.4
2,558,674	-		Pf6N2E2_2153	0.61	+0.0
2,558,697	+		Pf6N2E2_2153	0.63	+0.1
2,558,715	+		Pf6N2E2_2153	0.65	-1.1
2,558,715	+		Pf6N2E2_2153	0.65	-1.6
2,558,715	+		Pf6N2E2_2153	0.65	+0.3
2,558,716	-		Pf6N2E2_2153	0.65	+0.3
2,558,716	-		Pf6N2E2_2153	0.65	-0.3
2,558,716	-		Pf6N2E2_2153	0.65	+0.7
2,558,748	+		Pf6N2E2_2153	0.69	-1.0
2,558,748	+		Pf6N2E2_2153	0.69	-0.7
2,558,749	-		Pf6N2E2_2153	0.69	+0.9
2,558,749	-		Pf6N2E2_2153	0.69	-0.5
2,558,749	-		Pf6N2E2_2153	0.69	-2.1
2,558,749	-		Pf6N2E2_2153	0.69	-0.1
2,558,793	+		Pf6N2E2_2153	0.74	-0.9
2,558,793	+		Pf6N2E2_2153	0.74	+0.9
2,558,793	+		Pf6N2E2_2153	0.74	-0.1
2,558,793	+		Pf6N2E2_2153	0.74	-0.2
2,558,793	+		Pf6N2E2_2153	0.74	+0.7
2,558,793	+		Pf6N2E2_2153	0.74	+0.7
2,558,793	+		Pf6N2E2_2153	0.74	-0.6
2,558,889	+		Pf6N2E2_2153	0.84	-0.4
2,558,913	-		Pf6N2E2_2153	0.86	+0.2
2,558,913	-		Pf6N2E2_2153	0.86	+0.9
2,558,913	-		Pf6N2E2_2153	0.86	-0.3
2,558,969	+				-0.8
2,558,969	+				-0.1
2,559,015	+				+0.2
2,559,016	-				-3.0
2,559,018	+				+0.2
2,559,018	+				-0.1
2,559,018	+				+1.4
2,559,018	+				-1.5
2,559,018	+				+0.6
2,559,018	+				+0.1
2,559,018	+				-0.7
2,559,018	+				-1.9
2,559,018	+				+1.3
2,559,019	-				+1.0
2,559,053	+				+0.7
2,559,054	-				+0.8
2,559,087	+				+0.2
2,559,087	+				-1.1
2,559,088	-				+1.3
2,559,088	-				-0.5
2,559,088	-				-0.6
2,559,088	-				-0.6
2,559,107	+				+0.3
2,559,107	+				-1.1
2,559,137	-				-0.1
2,559,399	+		Pf6N2E2_2154	0.30	-0.7
2,559,399	+		Pf6N2E2_2154	0.30	+0.5
2,559,400	-		Pf6N2E2_2154	0.30	-0.3
2,559,400	-		Pf6N2E2_2154	0.30	-0.8
2,559,400	-		Pf6N2E2_2154	0.30	+0.5
2,559,471	+		Pf6N2E2_2154	0.37	-3.2
2,559,471	+		Pf6N2E2_2154	0.37	-0.3
2,559,472	-		Pf6N2E2_2154	0.37	-1.3
2,559,588	+		Pf6N2E2_2154	0.49	-1.5
2,559,588	+		Pf6N2E2_2154	0.49	-0.9
2,559,588	+				+0.9
2,559,588	+		Pf6N2E2_2154	0.49	-0.6
2,559,589	-		Pf6N2E2_2154	0.49	+0.8
2,559,589	-		Pf6N2E2_2154	0.49	-0.9
2,559,589	-		Pf6N2E2_2154	0.49	-0.6
2,559,655	+		Pf6N2E2_2154	0.55	-0.3
2,559,656	-		Pf6N2E2_2154	0.55	-0.1
2,559,656	-		Pf6N2E2_2154	0.55	+0.1
2,559,705	+		Pf6N2E2_2154	0.60	-0.8
2,559,705	+		Pf6N2E2_2154	0.60	-0.2
2,559,838	-		Pf6N2E2_2154	0.73	+0.2
2,559,838	-		Pf6N2E2_2154	0.73	-2.0
2,559,838	-		Pf6N2E2_2154	0.73	-0.3
2,559,870	+		Pf6N2E2_2154	0.76	-0.9
2,559,870	+		Pf6N2E2_2154	0.76	+0.3
2,559,871	-		Pf6N2E2_2154	0.76	-0.3
2,559,996	+		Pf6N2E2_2154	0.88	+0.7
2,560,269	+				+1.4
2,560,277	-				-1.5
2,560,395	+		Pf6N2E2_2155	0.15	+0.4
2,560,396	-		Pf6N2E2_2155	0.15	-1.6
2,560,396	-		Pf6N2E2_2155	0.15	-0.5
2,560,446	+		Pf6N2E2_2155	0.33	-1.7
2,560,586	+		Pf6N2E2_2155	0.82	+0.4
2,560,586	+		Pf6N2E2_2155	0.82	+0.3
2,560,587	-		Pf6N2E2_2155	0.82	+1.2
2,560,678	+				-0.9
2,560,678	+				+1.7
2,560,678	+				+0.8
2,560,678	+				+0.0
2,560,679	-				-0.7
2,560,679	-				+2.2
2,560,679	-				+1.8
2,560,682	+				-0.2
2,560,682	+				-0.4
2,560,682	+				+0.1
2,560,682	+				-0.8
2,560,682	+				-0.6
2,560,682	+				-1.1
2,560,682	+				-0.3
2,560,682	+				-0.4
2,560,682	+				-0.1
2,560,683	-				+0.6
2,560,683	-				-1.7
2,560,683	-				-0.8
2,560,683	-				+1.2
2,560,683	-				-1.1
2,560,683	-				-0.6
2,560,683	-				+0.9
2,560,683	-				+0.2
2,560,694	+				-0.6
2,560,694	+				+1.4
2,560,694	+				-0.0
2,560,694	+				+0.2