Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1915

Experiment: Vancomycin 0.24 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.24 mg/ml
2,267,617	-				-0.8
2,267,617	-				+0.4
2,267,637	-		Pf6N2E2_1914	0.10	+0.9
2,267,637	-		Pf6N2E2_1914	0.10	-0.5
2,267,637	-		Pf6N2E2_1914	0.10	-0.4
2,267,912	-		Pf6N2E2_1914	0.41	-0.3
2,267,912	-		Pf6N2E2_1914	0.41	-0.0
2,267,922	-		Pf6N2E2_1914	0.42	+1.0
2,268,131	+		Pf6N2E2_1914	0.65	+1.3
2,268,226	+		Pf6N2E2_1914	0.75	+1.8
2,268,227	-		Pf6N2E2_1914	0.76	-0.4
2,268,234	+		Pf6N2E2_1914	0.76	-0.0
2,268,234	+		Pf6N2E2_1914	0.76	+2.0
2,268,234	+		Pf6N2E2_1914	0.76	+0.6
2,268,235	-		Pf6N2E2_1914	0.76	-0.5
2,268,235	-		Pf6N2E2_1914	0.76	+0.2
2,268,238	+		Pf6N2E2_1914	0.77	-0.0
2,268,238	+		Pf6N2E2_1914	0.77	+0.3
2,268,238	+		Pf6N2E2_1914	0.77	+0.3
2,268,238	+		Pf6N2E2_1914	0.77	-0.9
2,268,238	+		Pf6N2E2_1914	0.77	+1.2
2,268,238	+		Pf6N2E2_1914	0.77	+1.7
2,268,239	-		Pf6N2E2_1914	0.77	-0.3
2,268,280	+		Pf6N2E2_1914	0.81	-0.5
2,268,280	+		Pf6N2E2_1914	0.81	+0.9
2,268,280	+		Pf6N2E2_1914	0.81	-0.4
2,268,280	+		Pf6N2E2_1914	0.81	+0.4
2,268,281	-		Pf6N2E2_1914	0.82	-0.2
2,268,281	-		Pf6N2E2_1914	0.82	-0.0
2,268,284	+		Pf6N2E2_1914	0.82	+0.1
2,268,284	+		Pf6N2E2_1914	0.82	-0.1
2,268,285	-		Pf6N2E2_1914	0.82	-0.0
2,268,285	-		Pf6N2E2_1914	0.82	+0.6
2,268,285	-		Pf6N2E2_1914	0.82	+1.6
2,268,307	+		Pf6N2E2_1914	0.84	-1.0
2,268,376	+				+0.2
2,268,376	+				+0.2
2,268,376	+				+0.4
2,268,377	-				+0.4
2,268,408	+				+1.0
2,268,417	-				-0.6
2,268,473	+				-0.2
2,268,552	+				+1.3
2,268,553	-				-0.4
2,268,553	-				+0.3
2,268,580	+				+0.5
2,268,680	-				+0.6
2,268,680	-				-0.1
2,268,680	-				-0.0
2,268,680	-				-1.3
2,268,680	-				-0.9
2,268,680	-				+1.0
2,268,722	+		Pf6N2E2_1915	0.10	+0.7
2,268,723	-		Pf6N2E2_1915	0.10	-0.9
2,268,797	+		Pf6N2E2_1915	0.18	+2.7
2,268,797	+		Pf6N2E2_1915	0.18	+1.0
2,268,798	-		Pf6N2E2_1915	0.18	+0.7
2,268,836	-		Pf6N2E2_1915	0.21	+1.3
2,269,000	+		Pf6N2E2_1915	0.37	-0.1
2,269,000	+		Pf6N2E2_1915	0.37	-2.0
2,269,000	+		Pf6N2E2_1915	0.37	-1.2
2,269,000	+		Pf6N2E2_1915	0.37	+1.2
2,269,001	-		Pf6N2E2_1915	0.38	+0.3
2,269,026	+		Pf6N2E2_1915	0.40	+1.3
2,269,030	+		Pf6N2E2_1915	0.40	+1.3
2,269,030	+		Pf6N2E2_1915	0.40	-0.7
2,269,030	+		Pf6N2E2_1915	0.40	+0.5
2,269,031	-		Pf6N2E2_1915	0.40	+0.1
2,269,031	-		Pf6N2E2_1915	0.40	-0.3
2,269,123	+		Pf6N2E2_1915	0.49	-1.2
2,269,123	+		Pf6N2E2_1915	0.49	+1.2
2,269,123	+		Pf6N2E2_1915	0.49	+1.2
2,269,123	+		Pf6N2E2_1915	0.49	-3.0
2,269,123	+		Pf6N2E2_1915	0.49	-0.8
2,269,124	-		Pf6N2E2_1915	0.49	+1.0
2,269,124	-		Pf6N2E2_1915	0.49	-0.5
2,269,124	-		Pf6N2E2_1915	0.49	+0.6
2,269,124	-		Pf6N2E2_1915	0.49	-0.3
2,269,124	-		Pf6N2E2_1915	0.49	+0.8
2,269,124	-		Pf6N2E2_1915	0.49	-0.9
2,269,127	+		Pf6N2E2_1915	0.50	+0.9
2,269,127	+		Pf6N2E2_1915	0.50	+0.6
2,269,127	+		Pf6N2E2_1915	0.50	-0.5
2,269,127	+		Pf6N2E2_1915	0.50	+0.8
2,269,127	+		Pf6N2E2_1915	0.50	-0.2
2,269,128	-		Pf6N2E2_1915	0.50	+0.5
2,269,128	-		Pf6N2E2_1915	0.50	+0.5
2,269,128	-		Pf6N2E2_1915	0.50	+0.8
2,269,128	-		Pf6N2E2_1915	0.50	+0.1
2,269,128	-		Pf6N2E2_1915	0.50	-0.0
2,269,194	-		Pf6N2E2_1915	0.56	+0.9
2,269,234	+		Pf6N2E2_1915	0.60	+0.1
2,269,234	+		Pf6N2E2_1915	0.60	+1.6
2,269,234	+		Pf6N2E2_1915	0.60	-1.8
2,269,234	+		Pf6N2E2_1915	0.60	+0.4
2,269,234	+		Pf6N2E2_1915	0.60	-0.6
2,269,235	-		Pf6N2E2_1915	0.60	+0.8
2,269,283	-		Pf6N2E2_1915	0.65	+0.2
2,269,460	+		Pf6N2E2_1915	0.82	-1.4
2,269,481	-		Pf6N2E2_1915	0.84	+0.4
2,269,481	-		Pf6N2E2_1915	0.84	+0.6
2,269,515	-		Pf6N2E2_1915	0.87	-0.2
2,269,525	-		Pf6N2E2_1915	0.88	-0.0
2,269,525	-		Pf6N2E2_1915	0.88	+1.9
2,269,545	-				-0.6
2,269,580	+				-0.0
2,269,607	+				-0.8
2,269,607	+				+0.5
2,269,656	-				-2.0
2,269,656	-				+0.3
2,269,659	+				-0.5
2,269,659	+				+0.2
2,269,659	+				-1.0
2,269,660	-				-0.3
2,269,733	+				-2.3
2,269,733	+				+1.0
2,269,733	+				-1.0
2,269,734	-				+0.2
2,269,783	-				-1.7
2,269,797	+				-0.0
2,269,798	-				+0.2
2,269,839	-				-2.2
2,269,839	-				-1.0
2,269,996	-				+1.2
2,270,066	-				+0.7
2,270,109	-				-0.3
2,270,109	-				+0.8
2,270,109	-				+0.1
2,270,111	-				-0.0
2,270,208	+				+1.0
2,270,209	-				+3.4
2,270,209	-				-0.7
2,270,244	-				-0.7
2,270,461	-				-1.0
2,270,461	-				-0.9
2,270,461	-				+0.7
2,270,596	-				-0.5
2,270,596	-				+0.7
2,270,634	+				+2.1