Experiment: Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05188 and H281DRAFT_05189 are separated by 71 nucleotides H281DRAFT_05189 and H281DRAFT_05190 are separated by 184 nucleotides
H281DRAFT_05188: H281DRAFT_05188 - Pimeloyl-ACP methyl ester carboxylesterase, at 143,956 to 144,978
_05188
H281DRAFT_05189: H281DRAFT_05189 - Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD, at 145,050 to 146,549
_05189
H281DRAFT_05190: H281DRAFT_05190 - transcriptional regulator, TetR family, at 146,734 to 147,468
_05190
Position (kb) 145
146
147 Strain fitness (log2 ratio) -2
-1
0
1
2 at 144.341 kb on + strand, within H281DRAFT_05188 at 144.431 kb on + strand, within H281DRAFT_05188 at 144.432 kb on - strand, within H281DRAFT_05188 at 144.432 kb on - strand, within H281DRAFT_05188 at 144.551 kb on - strand, within H281DRAFT_05188 at 144.939 kb on + strand at 144.939 kb on + strand at 144.939 kb on + strand at 144.940 kb on - strand at 144.993 kb on + strand at 144.993 kb on + strand at 145.196 kb on + strand at 145.257 kb on + strand, within H281DRAFT_05189 at 145.298 kb on - strand, within H281DRAFT_05189 at 145.321 kb on + strand, within H281DRAFT_05189 at 145.321 kb on + strand, within H281DRAFT_05189 at 145.322 kb on - strand, within H281DRAFT_05189 at 145.322 kb on - strand, within H281DRAFT_05189 at 145.322 kb on - strand, within H281DRAFT_05189 at 145.405 kb on + strand, within H281DRAFT_05189 at 145.589 kb on + strand, within H281DRAFT_05189 at 145.590 kb on - strand, within H281DRAFT_05189 at 145.624 kb on + strand, within H281DRAFT_05189 at 145.628 kb on - strand, within H281DRAFT_05189 at 145.641 kb on + strand, within H281DRAFT_05189 at 145.642 kb on - strand, within H281DRAFT_05189 at 145.720 kb on + strand, within H281DRAFT_05189 at 145.721 kb on - strand, within H281DRAFT_05189 at 145.816 kb on - strand, within H281DRAFT_05189 at 145.816 kb on - strand, within H281DRAFT_05189 at 146.230 kb on + strand, within H281DRAFT_05189 at 146.231 kb on - strand, within H281DRAFT_05189 at 146.246 kb on - strand, within H281DRAFT_05189 at 146.419 kb on + strand at 146.435 kb on + strand at 146.436 kb on - strand at 146.681 kb on - strand at 146.681 kb on - strand at 146.681 kb on - strand at 146.690 kb on - strand at 146.914 kb on + strand, within H281DRAFT_05190 at 146.914 kb on + strand, within H281DRAFT_05190 at 147.522 kb on + strand at 147.523 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM remove 144,341 + H281DRAFT_05188 0.38 -0.3 144,431 + H281DRAFT_05188 0.46 +1.4 144,432 - H281DRAFT_05188 0.47 +1.9 144,432 - H281DRAFT_05188 0.47 -0.0 144,551 - H281DRAFT_05188 0.58 +1.3 144,939 + +0.2 144,939 + -0.3 144,939 + -0.2 144,940 - -0.3 144,993 + -0.2 144,993 + -1.2 145,196 + +0.7 145,257 + H281DRAFT_05189 0.14 -0.2 145,298 - H281DRAFT_05189 0.17 -2.2 145,321 + H281DRAFT_05189 0.18 +0.1 145,321 + H281DRAFT_05189 0.18 -0.0 145,322 - H281DRAFT_05189 0.18 +1.2 145,322 - H281DRAFT_05189 0.18 -1.9 145,322 - H281DRAFT_05189 0.18 -0.3 145,405 + H281DRAFT_05189 0.24 +0.2 145,589 + H281DRAFT_05189 0.36 +2.5 145,590 - H281DRAFT_05189 0.36 +0.2 145,624 + H281DRAFT_05189 0.38 -0.5 145,628 - H281DRAFT_05189 0.39 -0.8 145,641 + H281DRAFT_05189 0.39 +0.4 145,642 - H281DRAFT_05189 0.39 +0.9 145,720 + H281DRAFT_05189 0.45 -0.7 145,721 - H281DRAFT_05189 0.45 -0.0 145,816 - H281DRAFT_05189 0.51 +0.2 145,816 - H281DRAFT_05189 0.51 -0.4 146,230 + H281DRAFT_05189 0.79 -0.6 146,231 - H281DRAFT_05189 0.79 -0.1 146,246 - H281DRAFT_05189 0.80 +0.2 146,419 + +0.8 146,435 + -0.9 146,436 - +0.2 146,681 - -0.8 146,681 - +0.1 146,681 - -2.0 146,690 - +0.2 146,914 + H281DRAFT_05190 0.24 +0.5 146,914 + H281DRAFT_05190 0.24 +0.2 147,522 + -0.6 147,523 - -0.7
Or see this region's nucleotide sequence