Experiment: Bacitracin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_936 and Ac3H11_937 are separated by 126 nucleotides Ac3H11_937 and Ac3H11_1045 are separated by 85 nucleotides Ac3H11_1045 and Ac3H11_1046 are separated by 61 nucleotides Ac3H11_1046 and Ac3H11_1047 are separated by 181 nucleotides Ac3H11_1047 and Ac3H11_1048 are separated by 157 nucleotides Ac3H11_1048 and Ac3H11_938 are separated by 67 nucleotides
Ac3H11_936 - ATP-dependent Clp protease ATP-binding subunit ClpX, at 53,576 to 54,841
_936
Ac3H11_937 - ATP-dependent protease La (EC 3.4.21.53) Type I, at 54,968 to 57,400
_937
Ac3H11_1045 - tRNA-Gly-GCC, at 57,486 to 57,558
_1045
Ac3H11_1046 - tRNA-Cys-GCA, at 57,620 to 57,690
_1046
Ac3H11_1047 - tRNA-Gly-GCC, at 57,872 to 57,944
_1047
Ac3H11_1048 - tRNA-Leu-TAA, at 58,102 to 58,191
_1048
Ac3H11_938 - FIG00582348: hypothetical protein, at 58,259 to 58,843
_938
Position (kb) 54
55
56
57
58 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 54.898 kb on + strand at 54.899 kb on - strand at 54.979 kb on + strand at 54.979 kb on + strand at 54.980 kb on - strand at 54.980 kb on - strand at 54.980 kb on - strand at 55.403 kb on + strand, within Ac3H11_937 at 55.403 kb on + strand, within Ac3H11_937 at 55.403 kb on + strand, within Ac3H11_937 at 55.403 kb on + strand, within Ac3H11_937 at 55.403 kb on + strand, within Ac3H11_937 at 55.404 kb on - strand, within Ac3H11_937 at 55.404 kb on - strand, within Ac3H11_937 at 55.404 kb on - strand, within Ac3H11_937 at 55.603 kb on + strand, within Ac3H11_937 at 55.667 kb on + strand, within Ac3H11_937 at 55.668 kb on - strand, within Ac3H11_937 at 55.668 kb on - strand, within Ac3H11_937 at 55.668 kb on - strand, within Ac3H11_937 at 55.859 kb on + strand, within Ac3H11_937 at 55.859 kb on + strand, within Ac3H11_937 at 55.859 kb on + strand, within Ac3H11_937 at 55.859 kb on + strand, within Ac3H11_937 at 55.859 kb on + strand, within Ac3H11_937 at 55.859 kb on + strand, within Ac3H11_937 at 55.859 kb on + strand, within Ac3H11_937 at 55.859 kb on + strand, within Ac3H11_937 at 55.859 kb on + strand, within Ac3H11_937 at 55.859 kb on + strand, within Ac3H11_937 at 55.860 kb on - strand, within Ac3H11_937 at 55.860 kb on - strand, within Ac3H11_937 at 55.860 kb on - strand, within Ac3H11_937 at 55.860 kb on - strand, within Ac3H11_937 at 55.860 kb on - strand, within Ac3H11_937 at 55.860 kb on - strand, within Ac3H11_937 at 55.953 kb on - strand, within Ac3H11_937 at 55.953 kb on - strand, within Ac3H11_937 at 55.988 kb on + strand, within Ac3H11_937 at 55.988 kb on + strand, within Ac3H11_937 at 55.989 kb on - strand, within Ac3H11_937 at 55.989 kb on - strand, within Ac3H11_937 at 55.989 kb on - strand, within Ac3H11_937 at 56.108 kb on + strand, within Ac3H11_937 at 56.108 kb on + strand, within Ac3H11_937 at 56.108 kb on + strand, within Ac3H11_937 at 56.108 kb on + strand, within Ac3H11_937 at 56.108 kb on + strand, within Ac3H11_937 at 56.108 kb on + strand, within Ac3H11_937 at 56.108 kb on + strand, within Ac3H11_937 at 56.108 kb on + strand, within Ac3H11_937 at 56.108 kb on + strand, within Ac3H11_937 at 56.108 kb on + strand, within Ac3H11_937 at 56.109 kb on - strand, within Ac3H11_937 at 56.109 kb on - strand, within Ac3H11_937 at 56.109 kb on - strand, within Ac3H11_937 at 56.109 kb on - strand, within Ac3H11_937 at 56.109 kb on - strand, within Ac3H11_937 at 56.109 kb on - strand, within Ac3H11_937 at 56.109 kb on - strand, within Ac3H11_937 at 56.109 kb on - strand, within Ac3H11_937 at 56.171 kb on + strand, within Ac3H11_937 at 56.171 kb on + strand, within Ac3H11_937 at 56.171 kb on + strand, within Ac3H11_937 at 56.171 kb on + strand, within Ac3H11_937 at 56.171 kb on + strand, within Ac3H11_937 at 56.171 kb on + strand, within Ac3H11_937 at 56.171 kb on + strand, within Ac3H11_937 at 56.171 kb on + strand, within Ac3H11_937 at 56.172 kb on - strand, within Ac3H11_937 at 56.172 kb on - strand, within Ac3H11_937 at 56.172 kb on - strand, within Ac3H11_937 at 56.172 kb on - strand, within Ac3H11_937 at 56.172 kb on - strand, within Ac3H11_937 at 56.172 kb on - strand, within Ac3H11_937 at 56.172 kb on - strand, within Ac3H11_937 at 56.172 kb on - strand, within Ac3H11_937 at 56.172 kb on - strand, within Ac3H11_937 at 56.172 kb on - strand, within Ac3H11_937 at 56.329 kb on + strand, within Ac3H11_937 at 56.329 kb on + strand, within Ac3H11_937 at 56.329 kb on + strand, within Ac3H11_937 at 56.329 kb on + strand, within Ac3H11_937 at 56.329 kb on + strand, within Ac3H11_937 at 56.330 kb on - strand, within Ac3H11_937 at 56.330 kb on - strand, within Ac3H11_937 at 56.330 kb on - strand, within Ac3H11_937 at 56.330 kb on - strand, within Ac3H11_937 at 56.330 kb on - strand, within Ac3H11_937 at 56.346 kb on - strand, within Ac3H11_937 at 56.346 kb on - strand, within Ac3H11_937 at 56.346 kb on - strand, within Ac3H11_937 at 56.492 kb on + strand, within Ac3H11_937 at 56.492 kb on + strand, within Ac3H11_937 at 56.492 kb on + strand, within Ac3H11_937 at 56.492 kb on + strand, within Ac3H11_937 at 56.492 kb on + strand, within Ac3H11_937 at 56.492 kb on + strand, within Ac3H11_937 at 56.492 kb on + strand, within Ac3H11_937 at 56.492 kb on + strand, within Ac3H11_937 at 56.492 kb on + strand, within Ac3H11_937 at 56.492 kb on + strand, within Ac3H11_937 at 56.492 kb on + strand, within Ac3H11_937 at 56.493 kb on - strand, within Ac3H11_937 at 56.493 kb on - strand, within Ac3H11_937 at 56.493 kb on - strand, within Ac3H11_937 at 56.493 kb on - strand, within Ac3H11_937 at 56.493 kb on - strand, within Ac3H11_937 at 56.493 kb on - strand, within Ac3H11_937 at 56.493 kb on - strand, within Ac3H11_937 at 56.493 kb on - strand, within Ac3H11_937 at 56.493 kb on - strand, within Ac3H11_937 at 56.493 kb on - strand, within Ac3H11_937 at 56.493 kb on - strand, within Ac3H11_937 at 56.579 kb on + strand, within Ac3H11_937 at 56.580 kb on - strand, within Ac3H11_937 at 56.580 kb on - strand, within Ac3H11_937 at 56.582 kb on + strand, within Ac3H11_937 at 56.582 kb on + strand, within Ac3H11_937 at 56.582 kb on + strand, within Ac3H11_937 at 56.582 kb on + strand, within Ac3H11_937 at 56.582 kb on + strand, within Ac3H11_937 at 56.582 kb on + strand, within Ac3H11_937 at 56.583 kb on - strand, within Ac3H11_937 at 56.583 kb on - strand, within Ac3H11_937 at 56.729 kb on + strand, within Ac3H11_937 at 56.729 kb on + strand, within Ac3H11_937 at 56.729 kb on + strand, within Ac3H11_937 at 56.729 kb on + strand, within Ac3H11_937 at 56.729 kb on + strand, within Ac3H11_937 at 56.729 kb on + strand, within Ac3H11_937 at 56.729 kb on + strand, within Ac3H11_937 at 56.729 kb on + strand, within Ac3H11_937 at 56.729 kb on + strand, within Ac3H11_937 at 56.730 kb on - strand, within Ac3H11_937 at 56.730 kb on - strand, within Ac3H11_937 at 56.730 kb on - strand, within Ac3H11_937 at 56.730 kb on - strand, within Ac3H11_937 at 56.735 kb on + strand, within Ac3H11_937 at 56.735 kb on + strand, within Ac3H11_937 at 56.735 kb on + strand, within Ac3H11_937 at 56.735 kb on + strand, within Ac3H11_937 at 56.735 kb on + strand, within Ac3H11_937 at 56.735 kb on + strand, within Ac3H11_937 at 56.735 kb on + strand, within Ac3H11_937 at 56.735 kb on + strand, within Ac3H11_937 at 56.735 kb on + strand, within Ac3H11_937 at 56.736 kb on - strand, within Ac3H11_937 at 56.736 kb on - strand, within Ac3H11_937 at 56.736 kb on - strand, within Ac3H11_937 at 56.736 kb on - strand, within Ac3H11_937 at 56.736 kb on - strand, within Ac3H11_937 at 56.736 kb on - strand, within Ac3H11_937 at 56.736 kb on - strand, within Ac3H11_937 at 56.736 kb on - strand, within Ac3H11_937 at 57.035 kb on - strand, within Ac3H11_937 at 57.035 kb on - strand, within Ac3H11_937 at 57.463 kb on + strand at 57.470 kb on + strand at 57.705 kb on + strand at 57.705 kb on + strand at 57.705 kb on + strand at 57.764 kb on + strand at 57.764 kb on + strand at 57.764 kb on + strand at 57.855 kb on + strand at 57.966 kb on + strand at 57.966 kb on + strand at 57.966 kb on + strand at 57.966 kb on + strand at 57.966 kb on + strand at 57.966 kb on + strand at 57.966 kb on + strand at 58.196 kb on + strand at 58.217 kb on + strand at 58.217 kb on + strand at 58.218 kb on - strand at 58.218 kb on - strand at 58.218 kb on - strand at 58.218 kb on - strand at 58.316 kb on + strand at 58.316 kb on + strand at 58.358 kb on + strand, within Ac3H11_938 at 58.359 kb on - strand, within Ac3H11_938 at 58.359 kb on - strand, within Ac3H11_938 at 58.359 kb on - strand, within Ac3H11_938
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.016 mg/ml remove 54,898 + -0.6 54,899 - -1.6 54,979 + -4.7 54,979 + -1.0 54,980 - -1.3 54,980 - -1.4 54,980 - -3.4 55,403 + Ac3H11_937 0.18 -0.0 55,403 + Ac3H11_937 0.18 -1.0 55,403 + Ac3H11_937 0.18 -1.8 55,403 + Ac3H11_937 0.18 -1.3 55,403 + Ac3H11_937 0.18 -1.3 55,404 - Ac3H11_937 0.18 -1.3 55,404 - Ac3H11_937 0.18 -1.3 55,404 - Ac3H11_937 0.18 -2.0 55,603 + Ac3H11_937 0.26 -1.8 55,667 + Ac3H11_937 0.29 -3.4 55,668 - Ac3H11_937 0.29 -2.0 55,668 - Ac3H11_937 0.29 -1.5 55,668 - Ac3H11_937 0.29 -1.7 55,859 + Ac3H11_937 0.37 -2.4 55,859 + Ac3H11_937 0.37 -0.8 55,859 + Ac3H11_937 0.37 -1.8 55,859 + Ac3H11_937 0.37 -0.3 55,859 + Ac3H11_937 0.37 -0.5 55,859 + Ac3H11_937 0.37 -2.4 55,859 + Ac3H11_937 0.37 -0.9 55,859 + Ac3H11_937 0.37 -0.5 55,859 + Ac3H11_937 0.37 -3.2 55,859 + Ac3H11_937 0.37 -2.8 55,860 - Ac3H11_937 0.37 -1.2 55,860 - Ac3H11_937 0.37 -2.1 55,860 - Ac3H11_937 0.37 -0.6 55,860 - Ac3H11_937 0.37 +0.1 55,860 - Ac3H11_937 0.37 -1.1 55,860 - Ac3H11_937 0.37 -1.4 55,953 - Ac3H11_937 0.40 -2.7 55,953 - Ac3H11_937 0.40 -0.7 55,988 + Ac3H11_937 0.42 -1.0 55,988 + Ac3H11_937 0.42 -2.0 55,989 - Ac3H11_937 0.42 -2.4 55,989 - Ac3H11_937 0.42 -1.7 55,989 - Ac3H11_937 0.42 +0.5 56,108 + Ac3H11_937 0.47 -3.7 56,108 + Ac3H11_937 0.47 -1.3 56,108 + Ac3H11_937 0.47 -2.5 56,108 + Ac3H11_937 0.47 -2.7 56,108 + Ac3H11_937 0.47 -0.8 56,108 + Ac3H11_937 0.47 -1.3 56,108 + Ac3H11_937 0.47 -1.4 56,108 + Ac3H11_937 0.47 -1.8 56,108 + Ac3H11_937 0.47 -1.4 56,108 + Ac3H11_937 0.47 -1.4 56,109 - Ac3H11_937 0.47 -1.1 56,109 - Ac3H11_937 0.47 -1.8 56,109 - Ac3H11_937 0.47 -1.8 56,109 - Ac3H11_937 0.47 -3.2 56,109 - Ac3H11_937 0.47 -1.3 56,109 - Ac3H11_937 0.47 -0.8 56,109 - Ac3H11_937 0.47 -3.0 56,109 - Ac3H11_937 0.47 -2.5 56,171 + Ac3H11_937 0.49 -2.5 56,171 + Ac3H11_937 0.49 -0.5 56,171 + Ac3H11_937 0.49 -2.0 56,171 + Ac3H11_937 0.49 -3.0 56,171 + Ac3H11_937 0.49 -0.3 56,171 + Ac3H11_937 0.49 -2.8 56,171 + Ac3H11_937 0.49 -1.2 56,171 + Ac3H11_937 0.49 -1.3 56,172 - Ac3H11_937 0.49 -1.8 56,172 - Ac3H11_937 0.49 -3.1 56,172 - Ac3H11_937 0.49 -1.2 56,172 - Ac3H11_937 0.49 -1.1 56,172 - Ac3H11_937 0.49 +1.0 56,172 - Ac3H11_937 0.49 -0.6 56,172 - Ac3H11_937 0.49 -2.2 56,172 - Ac3H11_937 0.49 -1.0 56,172 - Ac3H11_937 0.49 -1.5 56,172 - Ac3H11_937 0.49 -0.6 56,329 + Ac3H11_937 0.56 -0.8 56,329 + Ac3H11_937 0.56 -3.1 56,329 + Ac3H11_937 0.56 -0.9 56,329 + Ac3H11_937 0.56 -1.3 56,329 + Ac3H11_937 0.56 -2.7 56,330 - Ac3H11_937 0.56 +0.5 56,330 - Ac3H11_937 0.56 -2.2 56,330 - Ac3H11_937 0.56 -0.3 56,330 - Ac3H11_937 0.56 -1.3 56,330 - Ac3H11_937 0.56 -2.4 56,346 - Ac3H11_937 0.57 -0.9 56,346 - Ac3H11_937 0.57 -1.6 56,346 - Ac3H11_937 0.57 -1.3 56,492 + Ac3H11_937 0.63 -1.1 56,492 + Ac3H11_937 0.63 -0.6 56,492 + Ac3H11_937 0.63 -1.7 56,492 + Ac3H11_937 0.63 +0.2 56,492 + Ac3H11_937 0.63 -3.0 56,492 + Ac3H11_937 0.63 -0.0 56,492 + Ac3H11_937 0.63 -1.7 56,492 + Ac3H11_937 0.63 -0.8 56,492 + Ac3H11_937 0.63 -0.4 56,492 + Ac3H11_937 0.63 -1.9 56,492 + Ac3H11_937 0.63 -3.4 56,493 - Ac3H11_937 0.63 -0.4 56,493 - Ac3H11_937 0.63 -1.2 56,493 - Ac3H11_937 0.63 -2.5 56,493 - Ac3H11_937 0.63 +0.5 56,493 - Ac3H11_937 0.63 -2.6 56,493 - Ac3H11_937 0.63 -2.0 56,493 - Ac3H11_937 0.63 -0.4 56,493 - Ac3H11_937 0.63 -3.2 56,493 - Ac3H11_937 0.63 -0.7 56,493 - Ac3H11_937 0.63 -1.1 56,493 - Ac3H11_937 0.63 -2.7 56,579 + Ac3H11_937 0.66 -0.6 56,580 - Ac3H11_937 0.66 -1.3 56,580 - Ac3H11_937 0.66 -2.4 56,582 + Ac3H11_937 0.66 -0.2 56,582 + Ac3H11_937 0.66 -0.2 56,582 + Ac3H11_937 0.66 -2.9 56,582 + Ac3H11_937 0.66 -2.8 56,582 + Ac3H11_937 0.66 -0.3 56,582 + Ac3H11_937 0.66 -2.2 56,583 - Ac3H11_937 0.66 -1.1 56,583 - Ac3H11_937 0.66 -2.5 56,729 + Ac3H11_937 0.72 -0.5 56,729 + Ac3H11_937 0.72 -1.5 56,729 + Ac3H11_937 0.72 -0.1 56,729 + Ac3H11_937 0.72 -2.6 56,729 + Ac3H11_937 0.72 -0.8 56,729 + Ac3H11_937 0.72 -2.3 56,729 + Ac3H11_937 0.72 -1.3 56,729 + Ac3H11_937 0.72 -2.3 56,729 + Ac3H11_937 0.72 -1.0 56,730 - Ac3H11_937 0.72 -1.4 56,730 - Ac3H11_937 0.72 -1.4 56,730 - Ac3H11_937 0.72 -2.0 56,730 - Ac3H11_937 0.72 -2.8 56,735 + Ac3H11_937 0.73 -1.3 56,735 + Ac3H11_937 0.73 -1.7 56,735 + Ac3H11_937 0.73 -2.6 56,735 + Ac3H11_937 0.73 -0.9 56,735 + Ac3H11_937 0.73 -0.8 56,735 + Ac3H11_937 0.73 -1.5 56,735 + Ac3H11_937 0.73 -3.0 56,735 + Ac3H11_937 0.73 -3.0 56,735 + Ac3H11_937 0.73 -0.9 56,736 - Ac3H11_937 0.73 -1.5 56,736 - Ac3H11_937 0.73 -1.7 56,736 - Ac3H11_937 0.73 -0.3 56,736 - Ac3H11_937 0.73 -0.7 56,736 - Ac3H11_937 0.73 -2.8 56,736 - Ac3H11_937 0.73 +1.2 56,736 - Ac3H11_937 0.73 -2.3 56,736 - Ac3H11_937 0.73 -0.1 57,035 - Ac3H11_937 0.85 -3.6 57,035 - Ac3H11_937 0.85 -3.8 57,463 + -0.2 57,470 + -0.7 57,705 + +1.8 57,705 + +1.3 57,705 + -1.1 57,764 + -0.8 57,764 + -2.3 57,764 + +0.3 57,855 + -0.6 57,966 + +0.6 57,966 + -2.0 57,966 + +0.1 57,966 + +1.1 57,966 + -1.3 57,966 + +0.3 57,966 + -0.7 58,196 + -0.3 58,217 + -0.2 58,217 + +0.9 58,218 - -0.3 58,218 - -0.1 58,218 - -0.5 58,218 - -2.3 58,316 + -0.4 58,316 + +1.5 58,358 + Ac3H11_938 0.17 +0.0 58,359 - Ac3H11_938 0.17 +0.7 58,359 - Ac3H11_938 0.17 +1.1 58,359 - Ac3H11_938 0.17 -1.7
Or see this region's nucleotide sequence