Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_865

Experiment: Bacitracin 0.016 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_864 and Ac3H11_865 overlap by 1 nucleotidesAc3H11_865 and Ac3H11_866 are separated by 6 nucleotides Ac3H11_864 - Phospholipase A1 precursor (EC 3.1.1.32, EC 3.1.1.4); Outer membrane phospholipase A, at 145,912 to 147,126 _864 Ac3H11_865 - hypothetical protein, at 147,126 to 147,677 _865 Ac3H11_866 - ATP-dependent DNA helicase Rep, at 147,684 to 149,663 _866 Position (kb) 147 148Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 146.174 kb on + strandat 146.174 kb on + strand, within Ac3H11_864at 146.174 kb on + strand, within Ac3H11_864at 146.174 kb on + strand, within Ac3H11_864at 146.175 kb on - strand, within Ac3H11_864at 146.175 kb on - strand, within Ac3H11_864at 146.175 kb on - strand, within Ac3H11_864at 146.175 kb on - strand, within Ac3H11_864at 146.283 kb on - strand, within Ac3H11_864at 146.283 kb on - strand, within Ac3H11_864at 146.283 kb on - strand, within Ac3H11_864at 146.355 kb on - strand, within Ac3H11_864at 146.396 kb on + strand, within Ac3H11_864at 146.397 kb on - strand, within Ac3H11_864at 146.397 kb on - strand, within Ac3H11_864at 146.397 kb on - strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.402 kb on + strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strandat 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.403 kb on - strand, within Ac3H11_864at 146.431 kb on - strand, within Ac3H11_864at 146.471 kb on + strand, within Ac3H11_864at 146.472 kb on - strand, within Ac3H11_864at 146.694 kb on + strand, within Ac3H11_864at 146.695 kb on - strand, within Ac3H11_864at 146.757 kb on - strand, within Ac3H11_864at 146.757 kb on - strand, within Ac3H11_864at 146.848 kb on - strand, within Ac3H11_864at 147.213 kb on + strand, within Ac3H11_865at 147.214 kb on - strand, within Ac3H11_865at 147.559 kb on + strand, within Ac3H11_865at 147.677 kb on + strandat 147.677 kb on + strandat 147.677 kb on + strandat 147.677 kb on + strandat 147.678 kb on - strandat 147.678 kb on - strandat 147.678 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bacitracin 0.016 mg/ml
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146,174 + +0.6
146,174 + Ac3H11_864 0.22 +0.6
146,174 + Ac3H11_864 0.22 +0.2
146,174 + Ac3H11_864 0.22 -1.9
146,175 - Ac3H11_864 0.22 -0.6
146,175 - Ac3H11_864 0.22 -2.7
146,175 - Ac3H11_864 0.22 +0.0
146,175 - Ac3H11_864 0.22 -1.7
146,283 - Ac3H11_864 0.31 -1.4
146,283 - Ac3H11_864 0.31 -1.3
146,283 - Ac3H11_864 0.31 -0.5
146,355 - Ac3H11_864 0.36 +2.4
146,396 + Ac3H11_864 0.40 -1.1
146,397 - Ac3H11_864 0.40 -1.7
146,397 - Ac3H11_864 0.40 -1.9
146,397 - Ac3H11_864 0.40 +0.8
146,402 + Ac3H11_864 0.40 +0.7
146,402 + Ac3H11_864 0.40 -0.4
146,402 + Ac3H11_864 0.40 -2.0
146,402 + Ac3H11_864 0.40 +0.6
146,402 + Ac3H11_864 0.40 +1.8
146,402 + Ac3H11_864 0.40 -3.7
146,402 + Ac3H11_864 0.40 -1.0
146,402 + Ac3H11_864 0.40 -0.4
146,402 + Ac3H11_864 0.40 +0.0
146,402 + Ac3H11_864 0.40 +0.6
146,402 + Ac3H11_864 0.40 +0.5
146,402 + Ac3H11_864 0.40 +0.7
146,402 + Ac3H11_864 0.40 -0.9
146,402 + Ac3H11_864 0.40 -1.1
146,402 + Ac3H11_864 0.40 -1.6
146,402 + Ac3H11_864 0.40 -0.2
146,402 + Ac3H11_864 0.40 -1.1
146,402 + Ac3H11_864 0.40 +3.2
146,402 + Ac3H11_864 0.40 -0.4
146,402 + Ac3H11_864 0.40 -0.5
146,402 + Ac3H11_864 0.40 -0.1
146,402 + Ac3H11_864 0.40 -1.4
146,402 + Ac3H11_864 0.40 -2.1
146,402 + Ac3H11_864 0.40 -0.3
146,402 + Ac3H11_864 0.40 -1.1
146,402 + Ac3H11_864 0.40 +0.6
146,402 + Ac3H11_864 0.40 -0.4
146,402 + Ac3H11_864 0.40 +2.0
146,402 + Ac3H11_864 0.40 -0.5
146,402 + Ac3H11_864 0.40 +0.7
146,402 + Ac3H11_864 0.40 -0.7
146,402 + Ac3H11_864 0.40 -0.4
146,402 + Ac3H11_864 0.40 -1.2
146,402 + Ac3H11_864 0.40 -1.6
146,402 + Ac3H11_864 0.40 -0.9
146,402 + Ac3H11_864 0.40 -0.4
146,402 + Ac3H11_864 0.40 -0.7
146,402 + Ac3H11_864 0.40 +0.4
146,402 + Ac3H11_864 0.40 +0.0
146,402 + Ac3H11_864 0.40 -2.4
146,402 + Ac3H11_864 0.40 -3.2
146,402 + Ac3H11_864 0.40 +0.0
146,402 + Ac3H11_864 0.40 +0.5
146,402 + Ac3H11_864 0.40 -1.0
146,402 + Ac3H11_864 0.40 -0.9
146,402 + Ac3H11_864 0.40 +0.8
146,402 + Ac3H11_864 0.40 -0.2
146,402 + Ac3H11_864 0.40 +1.2
146,402 + Ac3H11_864 0.40 +0.5
146,402 + Ac3H11_864 0.40 -0.9
146,402 + Ac3H11_864 0.40 +0.3
146,402 + Ac3H11_864 0.40 -1.7
146,402 + Ac3H11_864 0.40 +0.6
146,402 + Ac3H11_864 0.40 -1.3
146,402 + Ac3H11_864 0.40 +0.3
146,402 + Ac3H11_864 0.40 +0.5
146,402 + Ac3H11_864 0.40 -0.6
146,402 + Ac3H11_864 0.40 +0.9
146,402 + Ac3H11_864 0.40 -0.7
146,402 + Ac3H11_864 0.40 +0.3
146,402 + Ac3H11_864 0.40 -2.9
146,402 + Ac3H11_864 0.40 +0.2
146,403 - Ac3H11_864 0.40 -0.4
146,403 - Ac3H11_864 0.40 -3.0
146,403 - Ac3H11_864 0.40 -0.1
146,403 - Ac3H11_864 0.40 -0.3
146,403 - Ac3H11_864 0.40 +0.4
146,403 - Ac3H11_864 0.40 +0.7
146,403 - Ac3H11_864 0.40 +0.5
146,403 - Ac3H11_864 0.40 -1.0
146,403 - Ac3H11_864 0.40 +0.1
146,403 - Ac3H11_864 0.40 +0.6
146,403 - Ac3H11_864 0.40 -0.1
146,403 - Ac3H11_864 0.40 -0.7
146,403 - Ac3H11_864 0.40 -0.5
146,403 - Ac3H11_864 0.40 -0.8
146,403 - Ac3H11_864 0.40 -0.5
146,403 - Ac3H11_864 0.40 -0.2
146,403 - Ac3H11_864 0.40 -0.3
146,403 - Ac3H11_864 0.40 +1.2
146,403 - Ac3H11_864 0.40 -0.8
146,403 - Ac3H11_864 0.40 -1.8
146,403 - Ac3H11_864 0.40 -0.3
146,403 - Ac3H11_864 0.40 +1.3
146,403 - Ac3H11_864 0.40 +0.8
146,403 - Ac3H11_864 0.40 -0.7
146,403 - Ac3H11_864 0.40 +1.0
146,403 - Ac3H11_864 0.40 +0.7
146,403 - Ac3H11_864 0.40 +0.3
146,403 - Ac3H11_864 0.40 -0.1
146,403 - Ac3H11_864 0.40 -0.8
146,403 - Ac3H11_864 0.40 +0.7
146,403 - Ac3H11_864 0.40 -1.4
146,403 - Ac3H11_864 0.40 +0.0
146,403 - Ac3H11_864 0.40 -1.0
146,403 - Ac3H11_864 0.40 +1.1
146,403 - Ac3H11_864 0.40 +0.0
146,403 - Ac3H11_864 0.40 -0.5
146,403 - Ac3H11_864 0.40 +0.9
146,403 - Ac3H11_864 0.40 +0.0
146,403 - Ac3H11_864 0.40 -0.3
146,403 - Ac3H11_864 0.40 +0.4
146,403 - Ac3H11_864 0.40 +0.2
146,403 - Ac3H11_864 0.40 -1.2
146,403 - Ac3H11_864 0.40 -2.6
146,403 - Ac3H11_864 0.40 +0.0
146,403 - Ac3H11_864 0.40 +0.3
146,403 - Ac3H11_864 0.40 +0.0
146,403 - Ac3H11_864 0.40 -3.9
146,403 - Ac3H11_864 0.40 +0.0
146,403 - Ac3H11_864 0.40 -2.4
146,403 - Ac3H11_864 0.40 -0.9
146,403 - Ac3H11_864 0.40 +0.0
146,403 - Ac3H11_864 0.40 +0.5
146,403 - Ac3H11_864 0.40 +0.9
146,403 - Ac3H11_864 0.40 -0.7
146,403 - Ac3H11_864 0.40 -2.9
146,403 - -1.0
146,403 - Ac3H11_864 0.40 -1.3
146,403 - Ac3H11_864 0.40 +0.9
146,403 - Ac3H11_864 0.40 -0.3
146,403 - Ac3H11_864 0.40 -1.2
146,403 - Ac3H11_864 0.40 +0.6
146,403 - Ac3H11_864 0.40 +0.3
146,403 - Ac3H11_864 0.40 -0.3
146,403 - Ac3H11_864 0.40 -0.5
146,403 - Ac3H11_864 0.40 +1.4
146,403 - Ac3H11_864 0.40 -1.6
146,403 - Ac3H11_864 0.40 +0.3
146,403 - Ac3H11_864 0.40 -0.7
146,403 - Ac3H11_864 0.40 +0.5
146,403 - Ac3H11_864 0.40 +0.2
146,403 - Ac3H11_864 0.40 -0.1
146,403 - Ac3H11_864 0.40 +0.3
146,431 - Ac3H11_864 0.43 -0.6
146,471 + Ac3H11_864 0.46 -2.1
146,472 - Ac3H11_864 0.46 -3.8
146,694 + Ac3H11_864 0.64 -0.8
146,695 - Ac3H11_864 0.64 +1.3
146,757 - Ac3H11_864 0.70 +0.7
146,757 - Ac3H11_864 0.70 +1.2
146,848 - Ac3H11_864 0.77 +0.3
147,213 + Ac3H11_865 0.16 -0.6
147,214 - Ac3H11_865 0.16 -0.7
147,559 + Ac3H11_865 0.78 -0.9
147,677 + -0.9
147,677 + -0.9
147,677 + +1.6
147,677 + -0.4
147,678 - -1.3
147,678 - -1.7
147,678 - +0.5

Or see this region's nucleotide sequence