Experiment: Bacitracin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_377 and Ac3H11_565 are separated by 48 nucleotides
Ac3H11_377 - Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8), at 52,425 to 54,353
_377
Ac3H11_565 - tRNA-His-GTG, at 54,402 to 54,474
_565
Position (kb) 54
55 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 54.710 kb on + strand at 54.754 kb on + strand at 54.755 kb on - strand at 54.766 kb on + strand at 54.767 kb on - strand at 54.767 kb on - strand at 54.791 kb on - strand at 54.795 kb on + strand at 54.795 kb on + strand at 54.795 kb on + strand at 54.795 kb on + strand at 54.796 kb on - strand at 54.796 kb on - strand at 54.796 kb on - strand at 54.796 kb on - strand at 54.796 kb on - strand at 54.796 kb on - strand at 54.796 kb on - strand at 54.929 kb on + strand at 54.929 kb on + strand at 54.929 kb on + strand at 54.929 kb on + strand at 54.929 kb on + strand at 54.929 kb on + strand at 54.929 kb on + strand at 54.929 kb on + strand at 54.929 kb on + strand at 54.930 kb on - strand at 54.930 kb on - strand at 54.930 kb on - strand at 54.930 kb on - strand at 54.930 kb on - strand at 54.935 kb on + strand at 54.935 kb on + strand at 54.935 kb on + strand at 54.935 kb on + strand at 54.936 kb on - strand at 54.936 kb on - strand at 54.936 kb on - strand at 55.102 kb on + strand at 55.102 kb on + strand at 55.102 kb on + strand at 55.102 kb on + strand at 55.102 kb on + strand at 55.102 kb on + strand at 55.103 kb on - strand at 55.103 kb on - strand at 55.103 kb on - strand at 55.103 kb on - strand at 55.103 kb on - strand at 55.103 kb on - strand at 55.103 kb on - strand at 55.103 kb on - strand at 55.103 kb on - strand at 55.104 kb on + strand at 55.145 kb on + strand at 55.213 kb on + strand at 55.213 kb on + strand at 55.213 kb on + strand at 55.213 kb on + strand at 55.213 kb on + strand at 55.213 kb on + strand at 55.214 kb on - strand at 55.214 kb on - strand at 55.214 kb on - strand at 55.214 kb on - strand at 55.214 kb on - strand at 55.214 kb on - strand at 55.215 kb on + strand at 55.216 kb on - strand at 55.305 kb on + strand at 55.306 kb on - strand at 55.364 kb on + strand at 55.364 kb on + strand at 55.364 kb on + strand at 55.364 kb on + strand at 55.364 kb on + strand at 55.365 kb on - strand at 55.365 kb on - strand at 55.365 kb on - strand at 55.365 kb on - strand at 55.378 kb on + strand at 55.379 kb on - strand at 55.379 kb on - strand at 55.379 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.016 mg/ml remove 54,710 + +0.2 54,754 + +0.1 54,755 - -0.9 54,766 + -2.5 54,767 - +1.7 54,767 - -0.5 54,791 - -1.5 54,795 + +1.1 54,795 + -0.5 54,795 + -0.5 54,795 + -0.5 54,796 - -0.5 54,796 - +0.4 54,796 - -0.3 54,796 - +0.4 54,796 - -0.5 54,796 - -1.6 54,796 - -0.7 54,929 + +0.5 54,929 + -1.1 54,929 + -1.9 54,929 + -0.1 54,929 + -0.0 54,929 + +1.7 54,929 + +0.7 54,929 + -1.1 54,929 + -0.3 54,930 - +0.1 54,930 - -1.6 54,930 - +0.6 54,930 - -0.2 54,930 - +0.4 54,935 + +0.9 54,935 + +0.4 54,935 + +0.5 54,935 + -0.4 54,936 - -0.7 54,936 - +1.4 54,936 - -0.2 55,102 + +0.0 55,102 + -3.0 55,102 + +1.6 55,102 + -0.4 55,102 + +0.0 55,102 + -0.1 55,103 - -0.0 55,103 - -0.8 55,103 - -0.2 55,103 - +0.6 55,103 - -0.6 55,103 - +0.8 55,103 - +0.3 55,103 - +0.1 55,103 - -0.6 55,104 + +1.1 55,145 + +0.5 55,213 + +0.1 55,213 + -0.2 55,213 + +2.6 55,213 + -0.4 55,213 + -1.1 55,213 + +0.1 55,214 - +0.5 55,214 - +1.8 55,214 - +1.1 55,214 - -0.8 55,214 - -0.6 55,214 - -0.4 55,215 + -0.4 55,216 - +0.4 55,305 + -1.1 55,306 - +0.4 55,364 + -0.5 55,364 + +0.4 55,364 + -2.0 55,364 + +0.5 55,364 + +0.9 55,365 - +0.5 55,365 - -0.2 55,365 - +1.2 55,365 - -0.9 55,378 + -0.5 55,379 - -0.0 55,379 - +0.4 55,379 - -0.5
Or see this region's nucleotide sequence